Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_06491 and MPMX19_06492 are separated by 223 nucleotides MPMX19_06492 and MPMX19_06493 are separated by 125 nucleotides MPMX19_06493 and MPMX19_06494 are separated by 136 nucleotides
MPMX19_06491: MPMX19_06491 - Alpha-ketoglutarate-dependent taurine dioxygenase, at 274,189 to 275,040
_06491
MPMX19_06492: MPMX19_06492 - IS5 family transposase ISAzs10, at 275,264 to 276,343
_06492
MPMX19_06493: MPMX19_06493 - hypothetical protein, at 276,469 to 276,648
_06493
MPMX19_06494: MPMX19_06494 - hypothetical protein, at 276,785 to 277,357
_06494
Position (kb) 275
276
277 Strain fitness (log2 ratio) -2
-1
0
1
2 at 274.603 kb on + strand, within MPMX19_06491 at 274.603 kb on + strand, within MPMX19_06491 at 274.603 kb on + strand, within MPMX19_06491 at 274.603 kb on + strand, within MPMX19_06491 at 274.603 kb on + strand, within MPMX19_06491 at 274.603 kb on + strand, within MPMX19_06491 at 274.604 kb on - strand, within MPMX19_06491 at 274.604 kb on - strand, within MPMX19_06491 at 274.604 kb on - strand, within MPMX19_06491 at 274.876 kb on + strand, within MPMX19_06491 at 274.876 kb on + strand, within MPMX19_06491 at 274.876 kb on + strand, within MPMX19_06491 at 274.877 kb on - strand, within MPMX19_06491 at 274.877 kb on - strand, within MPMX19_06491 at 274.884 kb on + strand, within MPMX19_06491 at 274.885 kb on - strand, within MPMX19_06491 at 274.885 kb on - strand, within MPMX19_06491 at 274.900 kb on + strand, within MPMX19_06491 at 274.900 kb on + strand, within MPMX19_06491 at 274.950 kb on + strand, within MPMX19_06491 at 274.950 kb on + strand, within MPMX19_06491 at 274.950 kb on + strand, within MPMX19_06491 at 274.950 kb on + strand, within MPMX19_06491 at 274.950 kb on + strand, within MPMX19_06491 at 274.951 kb on - strand, within MPMX19_06491 at 274.951 kb on - strand, within MPMX19_06491 at 274.951 kb on - strand, within MPMX19_06491 at 274.951 kb on - strand, within MPMX19_06491 at 274.982 kb on - strand at 275.001 kb on + strand at 275.001 kb on + strand at 275.001 kb on + strand at 275.001 kb on + strand at 275.001 kb on + strand at 275.001 kb on + strand at 275.002 kb on - strand at 275.036 kb on - strand at 275.072 kb on - strand at 275.103 kb on - strand at 275.184 kb on + strand at 275.184 kb on + strand at 275.306 kb on + strand at 275.306 kb on + strand at 275.306 kb on + strand at 275.306 kb on + strand at 275.307 kb on - strand at 275.307 kb on - strand at 275.307 kb on - strand at 275.307 kb on - strand at 275.307 kb on - strand at 275.307 kb on - strand at 275.307 kb on - strand at 275.412 kb on - strand, within MPMX19_06492 at 275.480 kb on + strand, within MPMX19_06492 at 275.480 kb on + strand, within MPMX19_06492 at 275.480 kb on + strand, within MPMX19_06492 at 275.480 kb on + strand, within MPMX19_06492 at 275.480 kb on + strand, within MPMX19_06492 at 275.480 kb on + strand, within MPMX19_06492 at 275.523 kb on - strand, within MPMX19_06492 at 275.523 kb on - strand, within MPMX19_06492 at 275.582 kb on - strand, within MPMX19_06492 at 275.582 kb on - strand, within MPMX19_06492 at 275.865 kb on - strand, within MPMX19_06492 at 276.053 kb on + strand, within MPMX19_06492 at 276.302 kb on + strand at 276.303 kb on - strand at 276.303 kb on - strand at 276.341 kb on + strand at 276.341 kb on + strand at 276.341 kb on + strand at 276.341 kb on + strand at 276.342 kb on - strand at 276.342 kb on - strand at 276.404 kb on + strand at 276.405 kb on - strand at 276.468 kb on + strand at 276.469 kb on - strand at 276.469 kb on - strand at 276.469 kb on - strand at 276.492 kb on + strand, within MPMX19_06493 at 276.492 kb on + strand, within MPMX19_06493 at 276.493 kb on - strand, within MPMX19_06493 at 276.493 kb on - strand, within MPMX19_06493 at 276.653 kb on + strand at 276.693 kb on + strand at 276.694 kb on - strand at 276.694 kb on - strand at 276.777 kb on + strand at 276.777 kb on + strand at 276.777 kb on + strand at 276.777 kb on + strand at 276.777 kb on + strand at 276.777 kb on + strand at 276.777 kb on + strand at 276.777 kb on + strand at 276.777 kb on + strand at 276.777 kb on + strand at 276.777 kb on + strand at 276.777 kb on + strand at 276.777 kb on + strand at 276.777 kb on + strand at 276.778 kb on - strand at 276.778 kb on - strand at 276.778 kb on - strand at 276.778 kb on - strand at 276.778 kb on - strand at 276.778 kb on - strand at 276.778 kb on - strand at 276.778 kb on - strand at 276.778 kb on - strand at 276.778 kb on - strand at 276.778 kb on - strand at 276.778 kb on - strand at 276.778 kb on - strand at 276.783 kb on + strand at 276.784 kb on - strand at 276.870 kb on - strand, within MPMX19_06494 at 276.870 kb on - strand, within MPMX19_06494 at 276.870 kb on - strand, within MPMX19_06494 at 276.913 kb on + strand, within MPMX19_06494 at 276.913 kb on + strand, within MPMX19_06494 at 276.914 kb on - strand, within MPMX19_06494 at 276.914 kb on - strand, within MPMX19_06494 at 276.914 kb on - strand, within MPMX19_06494 at 276.914 kb on - strand, within MPMX19_06494 at 276.914 kb on - strand, within MPMX19_06494 at 277.079 kb on + strand, within MPMX19_06494 at 277.079 kb on + strand, within MPMX19_06494 at 277.079 kb on + strand, within MPMX19_06494 at 277.079 kb on + strand, within MPMX19_06494 at 277.079 kb on + strand, within MPMX19_06494 at 277.079 kb on + strand, within MPMX19_06494 at 277.079 kb on + strand, within MPMX19_06494 at 277.080 kb on - strand, within MPMX19_06494 at 277.080 kb on - strand, within MPMX19_06494 at 277.080 kb on - strand, within MPMX19_06494 at 277.080 kb on - strand, within MPMX19_06494 at 277.080 kb on - strand, within MPMX19_06494 at 277.080 kb on - strand, within MPMX19_06494 at 277.080 kb on - strand, within MPMX19_06494 at 277.080 kb on - strand, within MPMX19_06494 at 277.080 kb on - strand, within MPMX19_06494 at 277.080 kb on - strand, within MPMX19_06494 at 277.080 kb on - strand, within MPMX19_06494 at 277.080 kb on - strand, within MPMX19_06494 at 277.080 kb on - strand, within MPMX19_06494 at 277.080 kb on - strand, within MPMX19_06494 at 277.082 kb on + strand, within MPMX19_06494 at 277.082 kb on + strand, within MPMX19_06494 at 277.083 kb on - strand, within MPMX19_06494 at 277.083 kb on - strand, within MPMX19_06494 at 277.083 kb on - strand, within MPMX19_06494 at 277.083 kb on - strand, within MPMX19_06494 at 277.083 kb on - strand, within MPMX19_06494 at 277.118 kb on + strand, within MPMX19_06494 at 277.118 kb on + strand, within MPMX19_06494 at 277.118 kb on + strand, within MPMX19_06494 at 277.118 kb on + strand, within MPMX19_06494 at 277.118 kb on + strand, within MPMX19_06494 at 277.118 kb on + strand, within MPMX19_06494 at 277.118 kb on + strand, within MPMX19_06494 at 277.118 kb on + strand, within MPMX19_06494 at 277.119 kb on - strand, within MPMX19_06494 at 277.119 kb on - strand, within MPMX19_06494 at 277.119 kb on - strand, within MPMX19_06494 at 277.119 kb on - strand, within MPMX19_06494 at 277.119 kb on - strand, within MPMX19_06494 at 277.119 kb on - strand, within MPMX19_06494 at 277.119 kb on - strand, within MPMX19_06494 at 277.119 kb on - strand, within MPMX19_06494 at 277.189 kb on + strand, within MPMX19_06494 at 277.190 kb on - strand, within MPMX19_06494 at 277.203 kb on - strand, within MPMX19_06494 at 277.203 kb on - strand, within MPMX19_06494 at 277.203 kb on - strand, within MPMX19_06494 at 277.203 kb on - strand, within MPMX19_06494 at 277.314 kb on + strand at 277.314 kb on + strand at 277.314 kb on + strand at 277.314 kb on + strand at 277.315 kb on - strand at 277.315 kb on - strand at 277.325 kb on + strand at 277.325 kb on + strand at 277.325 kb on + strand at 277.325 kb on + strand at 277.325 kb on + strand at 277.325 kb on + strand at 277.326 kb on - strand at 277.326 kb on - strand at 277.326 kb on - strand at 277.326 kb on - strand at 277.326 kb on - strand at 277.326 kb on - strand at 277.326 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 274,603 + MPMX19_06491 0.49 -0.1 274,603 + MPMX19_06491 0.49 -2.2 274,603 + MPMX19_06491 0.49 -1.0 274,603 + MPMX19_06491 0.49 -1.4 274,603 + MPMX19_06491 0.49 -1.0 274,603 + MPMX19_06491 0.49 -0.3 274,604 - MPMX19_06491 0.49 +0.0 274,604 - MPMX19_06491 0.49 -0.8 274,604 - MPMX19_06491 0.49 -0.4 274,876 + MPMX19_06491 0.81 -0.5 274,876 + MPMX19_06491 0.81 -1.8 274,876 + MPMX19_06491 0.81 -1.1 274,877 - MPMX19_06491 0.81 +0.3 274,877 - MPMX19_06491 0.81 -1.3 274,884 + MPMX19_06491 0.82 +0.7 274,885 - MPMX19_06491 0.82 -1.6 274,885 - MPMX19_06491 0.82 +0.5 274,900 + MPMX19_06491 0.83 -1.0 274,900 + MPMX19_06491 0.83 -0.9 274,950 + MPMX19_06491 0.89 -0.3 274,950 + MPMX19_06491 0.89 +0.2 274,950 + MPMX19_06491 0.89 -0.0 274,950 + MPMX19_06491 0.89 -0.1 274,950 + MPMX19_06491 0.89 -1.2 274,951 - MPMX19_06491 0.89 -1.1 274,951 - MPMX19_06491 0.89 +0.1 274,951 - MPMX19_06491 0.89 +1.0 274,951 - MPMX19_06491 0.89 +1.2 274,982 - -0.9 275,001 + -0.2 275,001 + +0.6 275,001 + -0.4 275,001 + +0.3 275,001 + +0.3 275,001 + -0.3 275,002 - -0.2 275,036 - +0.4 275,072 - -0.2 275,103 - -0.8 275,184 + -0.0 275,184 + -0.7 275,306 + -2.1 275,306 + -2.1 275,306 + -1.1 275,306 + +0.2 275,307 - +0.1 275,307 - +0.7 275,307 - -0.1 275,307 - -0.9 275,307 - -0.3 275,307 - +0.3 275,307 - -0.3 275,412 - MPMX19_06492 0.14 +0.5 275,480 + MPMX19_06492 0.20 +1.3 275,480 + MPMX19_06492 0.20 +0.2 275,480 + MPMX19_06492 0.20 -1.1 275,480 + MPMX19_06492 0.20 +1.0 275,480 + MPMX19_06492 0.20 -0.1 275,480 + MPMX19_06492 0.20 -0.5 275,523 - MPMX19_06492 0.24 -0.7 275,523 - MPMX19_06492 0.24 -1.1 275,582 - MPMX19_06492 0.29 +0.3 275,582 - MPMX19_06492 0.29 +1.9 275,865 - MPMX19_06492 0.56 -0.4 276,053 + MPMX19_06492 0.73 +0.2 276,302 + -0.9 276,303 - +0.6 276,303 - -0.7 276,341 + +0.3 276,341 + -0.4 276,341 + -0.4 276,341 + -0.3 276,342 - -0.6 276,342 - +1.4 276,404 + +0.9 276,405 - +0.1 276,468 + -0.2 276,469 - +0.7 276,469 - -0.4 276,469 - -0.2 276,492 + MPMX19_06493 0.13 -0.4 276,492 + MPMX19_06493 0.13 +0.1 276,493 - MPMX19_06493 0.13 -0.6 276,493 - MPMX19_06493 0.13 -1.9 276,653 + +0.5 276,693 + -1.1 276,694 - -0.4 276,694 - -1.2 276,777 + +0.6 276,777 + -0.2 276,777 + -0.7 276,777 + -0.8 276,777 + -0.3 276,777 + +0.2 276,777 + -0.4 276,777 + -0.2 276,777 + -1.1 276,777 + -0.8 276,777 + +0.6 276,777 + +0.5 276,777 + +1.9 276,777 + -0.8 276,778 - -1.5 276,778 - +0.9 276,778 - -1.4 276,778 - -0.1 276,778 - -2.1 276,778 - -1.4 276,778 - +0.9 276,778 - -0.6 276,778 - -0.5 276,778 - -1.0 276,778 - +0.3 276,778 - +0.9 276,778 - +0.9 276,783 + +0.2 276,784 - -0.8 276,870 - MPMX19_06494 0.15 +1.3 276,870 - MPMX19_06494 0.15 +0.3 276,870 - MPMX19_06494 0.15 +0.2 276,913 + MPMX19_06494 0.22 +0.4 276,913 + MPMX19_06494 0.22 -0.5 276,914 - MPMX19_06494 0.23 +0.9 276,914 - MPMX19_06494 0.23 -0.9 276,914 - MPMX19_06494 0.23 -0.6 276,914 - MPMX19_06494 0.23 -0.3 276,914 - MPMX19_06494 0.23 +0.4 277,079 + MPMX19_06494 0.51 -0.7 277,079 + MPMX19_06494 0.51 +1.2 277,079 + MPMX19_06494 0.51 -0.1 277,079 + MPMX19_06494 0.51 -1.8 277,079 + MPMX19_06494 0.51 -1.4 277,079 + MPMX19_06494 0.51 +0.1 277,079 + MPMX19_06494 0.51 -1.0 277,080 - MPMX19_06494 0.51 -0.1 277,080 - MPMX19_06494 0.51 -0.7 277,080 - MPMX19_06494 0.51 +0.4 277,080 - MPMX19_06494 0.51 +0.5 277,080 - MPMX19_06494 0.51 -2.1 277,080 - MPMX19_06494 0.51 -0.8 277,080 - MPMX19_06494 0.51 -0.6 277,080 - MPMX19_06494 0.51 +0.0 277,080 - MPMX19_06494 0.51 +0.8 277,080 - MPMX19_06494 0.51 -1.8 277,080 - MPMX19_06494 0.51 -0.1 277,080 - MPMX19_06494 0.51 +0.6 277,080 - MPMX19_06494 0.51 -1.0 277,080 - MPMX19_06494 0.51 +0.6 277,082 + MPMX19_06494 0.52 +0.9 277,082 + MPMX19_06494 0.52 +0.5 277,083 - MPMX19_06494 0.52 -0.3 277,083 - MPMX19_06494 0.52 +0.2 277,083 - MPMX19_06494 0.52 -0.1 277,083 - MPMX19_06494 0.52 -0.2 277,083 - MPMX19_06494 0.52 +1.0 277,118 + MPMX19_06494 0.58 +0.4 277,118 + MPMX19_06494 0.58 -0.9 277,118 + MPMX19_06494 0.58 -0.9 277,118 + MPMX19_06494 0.58 -1.7 277,118 + MPMX19_06494 0.58 -1.7 277,118 + MPMX19_06494 0.58 -0.1 277,118 + MPMX19_06494 0.58 +0.1 277,118 + MPMX19_06494 0.58 +0.0 277,119 - MPMX19_06494 0.58 -0.0 277,119 - MPMX19_06494 0.58 +0.7 277,119 - MPMX19_06494 0.58 +1.3 277,119 - MPMX19_06494 0.58 -1.9 277,119 - MPMX19_06494 0.58 -0.7 277,119 - MPMX19_06494 0.58 +1.5 277,119 - MPMX19_06494 0.58 -0.4 277,119 - MPMX19_06494 0.58 -0.9 277,189 + MPMX19_06494 0.71 -0.4 277,190 - MPMX19_06494 0.71 -0.6 277,203 - MPMX19_06494 0.73 -0.8 277,203 - MPMX19_06494 0.73 -0.7 277,203 - MPMX19_06494 0.73 +0.2 277,203 - MPMX19_06494 0.73 -0.7 277,314 + +1.3 277,314 + +0.7 277,314 + -0.9 277,314 + -0.2 277,315 - +0.3 277,315 - -0.3 277,325 + +0.3 277,325 + +0.1 277,325 + -0.5 277,325 + -2.7 277,325 + -1.3 277,325 + +0.3 277,326 - -0.6 277,326 - +0.5 277,326 - +0.3 277,326 - -1.1 277,326 - -1.0 277,326 - -0.9 277,326 - -0.3
Or see this region's nucleotide sequence