Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_06486 and MPMX19_06487 are separated by 43 nucleotides MPMX19_06487 and MPMX19_06488 are separated by 390 nucleotides MPMX19_06488 and MPMX19_06489 are separated by 25 nucleotides MPMX19_06489 and MPMX19_06490 overlap by 4 nucleotides
MPMX19_06486: MPMX19_06486 - Phenylacetate-coenzyme A ligase, at 269,430 to 270,764
_06486
MPMX19_06487: MPMX19_06487 - hypothetical protein, at 270,808 to 271,050
_06487
MPMX19_06488: MPMX19_06488 - Taurine-binding periplasmic protein, at 271,441 to 272,457
_06488
MPMX19_06489: MPMX19_06489 - Taurine import ATP-binding protein TauB, at 272,483 to 273,286
_06489
MPMX19_06490: MPMX19_06490 - Putative aliphatic sulfonates transport permease protein SsuC, at 273,283 to 274,134
_06490
Position (kb) 271
272
273 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 270.473 kb on - strand, within MPMX19_06486 at 270.473 kb on - strand, within MPMX19_06486 at 270.473 kb on - strand, within MPMX19_06486 at 270.473 kb on - strand, within MPMX19_06486 at 270.635 kb on - strand at 270.652 kb on + strand at 270.652 kb on + strand at 270.652 kb on + strand at 270.652 kb on + strand at 270.740 kb on - strand at 270.740 kb on - strand at 270.787 kb on + strand at 270.787 kb on + strand at 270.787 kb on + strand at 270.787 kb on + strand at 270.787 kb on + strand at 270.787 kb on + strand at 270.787 kb on + strand at 270.787 kb on + strand at 270.787 kb on + strand at 270.787 kb on + strand at 270.787 kb on + strand at 270.787 kb on + strand at 270.787 kb on + strand at 270.787 kb on + strand at 270.787 kb on + strand at 270.787 kb on + strand at 270.787 kb on + strand at 270.787 kb on + strand at 270.787 kb on + strand at 270.787 kb on + strand at 270.787 kb on + strand at 270.787 kb on + strand at 270.787 kb on + strand at 270.788 kb on - strand at 270.788 kb on - strand at 270.788 kb on - strand at 270.788 kb on - strand at 270.788 kb on - strand at 270.788 kb on - strand at 270.788 kb on - strand at 270.788 kb on - strand at 270.788 kb on - strand at 270.788 kb on - strand at 270.788 kb on - strand at 270.788 kb on - strand at 271.064 kb on - strand at 271.064 kb on - strand at 271.188 kb on - strand at 271.197 kb on + strand at 271.257 kb on + strand at 271.257 kb on + strand at 271.257 kb on + strand at 271.258 kb on - strand at 271.258 kb on - strand at 271.258 kb on - strand at 271.258 kb on - strand at 271.258 kb on - strand at 271.260 kb on - strand at 271.299 kb on - strand at 271.371 kb on + strand at 271.371 kb on + strand at 271.371 kb on + strand at 271.372 kb on - strand at 271.372 kb on - strand at 271.469 kb on - strand at 271.469 kb on - strand at 271.469 kb on - strand at 271.469 kb on - strand at 271.690 kb on + strand, within MPMX19_06488 at 271.690 kb on + strand, within MPMX19_06488 at 271.690 kb on + strand, within MPMX19_06488 at 272.158 kb on + strand, within MPMX19_06488 at 272.158 kb on + strand, within MPMX19_06488 at 272.159 kb on - strand, within MPMX19_06488 at 272.159 kb on - strand, within MPMX19_06488 at 272.347 kb on - strand, within MPMX19_06488 at 272.437 kb on + strand at 272.437 kb on + strand at 272.437 kb on + strand at 272.437 kb on + strand at 272.672 kb on - strand, within MPMX19_06489 at 272.672 kb on - strand, within MPMX19_06489 at 272.672 kb on - strand, within MPMX19_06489 at 273.215 kb on + strand at 273.215 kb on + strand at 273.215 kb on + strand at 273.216 kb on - strand at 273.216 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 270,473 - MPMX19_06486 0.78 -0.8 270,473 - MPMX19_06486 0.78 +0.3 270,473 - MPMX19_06486 0.78 -0.6 270,473 - MPMX19_06486 0.78 +0.4 270,635 - -2.1 270,652 + -1.1 270,652 + +0.3 270,652 + +1.2 270,652 + -0.6 270,740 - +0.2 270,740 - -0.8 270,787 + +0.4 270,787 + +0.8 270,787 + -0.7 270,787 + -3.8 270,787 + -0.6 270,787 + -0.3 270,787 + +0.2 270,787 + +0.9 270,787 + -1.1 270,787 + -1.1 270,787 + +0.6 270,787 + -0.3 270,787 + -1.7 270,787 + -0.6 270,787 + -0.1 270,787 + -0.6 270,787 + -1.2 270,787 + +1.6 270,787 + -1.1 270,787 + -0.2 270,787 + +0.6 270,787 + -0.2 270,787 + -0.4 270,788 - -0.7 270,788 - +0.4 270,788 - +0.2 270,788 - -0.1 270,788 - -0.6 270,788 - -1.4 270,788 - -0.1 270,788 - -1.6 270,788 - -0.8 270,788 - +0.1 270,788 - +1.3 270,788 - -2.0 271,064 - -0.4 271,064 - +0.8 271,188 - +1.5 271,197 + +0.1 271,257 + -1.8 271,257 + -0.6 271,257 + +0.5 271,258 - +0.2 271,258 - -1.7 271,258 - -0.5 271,258 - +1.1 271,258 - +0.3 271,260 - -1.7 271,299 - +1.2 271,371 + -1.8 271,371 + -0.3 271,371 + -0.8 271,372 - -0.1 271,372 - -1.6 271,469 - +0.1 271,469 - -2.4 271,469 - -1.2 271,469 - -1.3 271,690 + MPMX19_06488 0.24 -0.2 271,690 + MPMX19_06488 0.24 -0.6 271,690 + MPMX19_06488 0.24 +0.1 272,158 + MPMX19_06488 0.71 +1.4 272,158 + MPMX19_06488 0.71 -1.1 272,159 - MPMX19_06488 0.71 +1.9 272,159 - MPMX19_06488 0.71 +2.2 272,347 - MPMX19_06488 0.89 -1.3 272,437 + +0.2 272,437 + +0.5 272,437 + -2.5 272,437 + +0.2 272,672 - MPMX19_06489 0.24 +0.3 272,672 - MPMX19_06489 0.24 +0.9 272,672 - MPMX19_06489 0.24 -0.4 273,215 + +0.6 273,215 + -0.2 273,215 + -0.5 273,216 - -1.3 273,216 - +0.6
Or see this region's nucleotide sequence