Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_06394 and MPMX19_06395 are separated by 68 nucleotides MPMX19_06395 and MPMX19_06396 are separated by 31 nucleotides MPMX19_06396 and MPMX19_06397 are separated by 16 nucleotides MPMX19_06397 and MPMX19_06398 are separated by 75 nucleotides
MPMX19_06394: MPMX19_06394 - hypothetical protein, at 159,901 to 160,572
_06394
MPMX19_06395: MPMX19_06395 - Inner membrane protein YqaA, at 160,641 to 161,066
_06395
MPMX19_06396: MPMX19_06396 - hypothetical protein, at 161,098 to 161,571
_06396
MPMX19_06397: MPMX19_06397 - hypothetical protein, at 161,588 to 162,355
_06397
MPMX19_06398: MPMX19_06398 - Silver exporting P-type ATPase, at 162,431 to 164,830
_06398
Position (kb) 161
162 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 160.187 kb on + strand, within MPMX19_06394 at 160.187 kb on + strand, within MPMX19_06394 at 160.187 kb on + strand, within MPMX19_06394 at 160.187 kb on + strand, within MPMX19_06394 at 160.187 kb on + strand, within MPMX19_06394 at 160.187 kb on + strand, within MPMX19_06394 at 160.187 kb on + strand, within MPMX19_06394 at 160.187 kb on + strand, within MPMX19_06394 at 160.188 kb on - strand, within MPMX19_06394 at 160.188 kb on - strand, within MPMX19_06394 at 160.188 kb on - strand, within MPMX19_06394 at 160.188 kb on - strand, within MPMX19_06394 at 160.188 kb on - strand, within MPMX19_06394 at 160.188 kb on - strand, within MPMX19_06394 at 160.336 kb on + strand, within MPMX19_06394 at 160.336 kb on + strand, within MPMX19_06394 at 160.336 kb on + strand, within MPMX19_06394 at 160.336 kb on + strand, within MPMX19_06394 at 160.336 kb on + strand, within MPMX19_06394 at 160.336 kb on + strand, within MPMX19_06394 at 160.336 kb on + strand, within MPMX19_06394 at 160.336 kb on + strand, within MPMX19_06394 at 160.336 kb on + strand, within MPMX19_06394 at 160.337 kb on - strand, within MPMX19_06394 at 160.337 kb on - strand, within MPMX19_06394 at 160.337 kb on - strand, within MPMX19_06394 at 160.337 kb on - strand, within MPMX19_06394 at 160.337 kb on - strand, within MPMX19_06394 at 160.337 kb on - strand, within MPMX19_06394 at 160.337 kb on - strand, within MPMX19_06394 at 160.337 kb on - strand, within MPMX19_06394 at 160.337 kb on - strand, within MPMX19_06394 at 160.337 kb on - strand, within MPMX19_06394 at 160.338 kb on + strand, within MPMX19_06394 at 160.338 kb on + strand, within MPMX19_06394 at 160.338 kb on + strand, within MPMX19_06394 at 160.338 kb on + strand, within MPMX19_06394 at 160.339 kb on - strand, within MPMX19_06394 at 160.339 kb on - strand, within MPMX19_06394 at 160.339 kb on - strand, within MPMX19_06394 at 160.417 kb on + strand, within MPMX19_06394 at 160.417 kb on + strand, within MPMX19_06394 at 160.417 kb on + strand, within MPMX19_06394 at 160.417 kb on + strand, within MPMX19_06394 at 160.418 kb on - strand, within MPMX19_06394 at 160.418 kb on - strand, within MPMX19_06394 at 160.418 kb on - strand, within MPMX19_06394 at 160.546 kb on + strand at 160.546 kb on + strand at 160.546 kb on + strand at 160.546 kb on + strand at 160.547 kb on - strand at 160.702 kb on + strand, within MPMX19_06395 at 160.703 kb on - strand, within MPMX19_06395 at 160.830 kb on + strand, within MPMX19_06395 at 160.830 kb on + strand, within MPMX19_06395 at 160.831 kb on - strand, within MPMX19_06395 at 160.831 kb on - strand, within MPMX19_06395 at 160.831 kb on - strand, within MPMX19_06395 at 160.847 kb on + strand, within MPMX19_06395 at 160.902 kb on + strand, within MPMX19_06395 at 161.040 kb on + strand at 161.041 kb on - strand at 161.041 kb on - strand at 161.064 kb on + strand at 161.064 kb on + strand at 161.064 kb on + strand at 161.064 kb on + strand at 161.064 kb on + strand at 161.064 kb on + strand at 161.064 kb on + strand at 161.064 kb on + strand at 161.065 kb on - strand at 161.065 kb on - strand at 161.065 kb on - strand at 161.065 kb on - strand at 161.065 kb on - strand at 161.203 kb on + strand, within MPMX19_06396 at 161.203 kb on + strand, within MPMX19_06396 at 161.203 kb on + strand, within MPMX19_06396 at 161.203 kb on + strand, within MPMX19_06396 at 161.203 kb on + strand, within MPMX19_06396 at 161.203 kb on + strand, within MPMX19_06396 at 161.204 kb on - strand, within MPMX19_06396 at 161.204 kb on - strand, within MPMX19_06396 at 161.204 kb on - strand, within MPMX19_06396 at 161.204 kb on - strand, within MPMX19_06396 at 161.403 kb on + strand, within MPMX19_06396 at 161.404 kb on - strand, within MPMX19_06396 at 161.404 kb on - strand, within MPMX19_06396 at 161.455 kb on + strand, within MPMX19_06396 at 161.455 kb on + strand, within MPMX19_06396 at 161.455 kb on + strand, within MPMX19_06396 at 161.455 kb on + strand, within MPMX19_06396 at 161.455 kb on + strand, within MPMX19_06396 at 161.456 kb on - strand, within MPMX19_06396 at 161.456 kb on - strand, within MPMX19_06396 at 161.456 kb on - strand, within MPMX19_06396 at 161.456 kb on - strand, within MPMX19_06396 at 161.456 kb on - strand, within MPMX19_06396 at 161.456 kb on - strand, within MPMX19_06396 at 161.456 kb on - strand, within MPMX19_06396 at 161.456 kb on - strand, within MPMX19_06396 at 161.456 kb on - strand, within MPMX19_06396 at 161.456 kb on - strand, within MPMX19_06396 at 161.456 kb on - strand, within MPMX19_06396 at 161.456 kb on - strand, within MPMX19_06396 at 161.729 kb on + strand, within MPMX19_06397 at 161.730 kb on - strand, within MPMX19_06397 at 161.810 kb on + strand, within MPMX19_06397 at 161.825 kb on + strand, within MPMX19_06397 at 161.825 kb on + strand, within MPMX19_06397 at 161.825 kb on + strand, within MPMX19_06397 at 161.907 kb on - strand, within MPMX19_06397 at 161.907 kb on - strand, within MPMX19_06397 at 161.907 kb on - strand, within MPMX19_06397 at 161.996 kb on + strand, within MPMX19_06397 at 161.996 kb on + strand, within MPMX19_06397 at 161.996 kb on + strand, within MPMX19_06397 at 161.996 kb on + strand, within MPMX19_06397 at 161.997 kb on - strand, within MPMX19_06397 at 161.997 kb on - strand, within MPMX19_06397 at 161.997 kb on - strand, within MPMX19_06397 at 161.997 kb on - strand, within MPMX19_06397 at 161.997 kb on - strand, within MPMX19_06397 at 161.997 kb on - strand, within MPMX19_06397 at 161.997 kb on - strand, within MPMX19_06397 at 161.997 kb on - strand, within MPMX19_06397 at 162.089 kb on + strand, within MPMX19_06397 at 162.089 kb on + strand, within MPMX19_06397 at 162.089 kb on + strand, within MPMX19_06397 at 162.089 kb on + strand, within MPMX19_06397 at 162.089 kb on + strand, within MPMX19_06397 at 162.089 kb on + strand, within MPMX19_06397 at 162.089 kb on + strand, within MPMX19_06397 at 162.089 kb on + strand, within MPMX19_06397 at 162.089 kb on + strand, within MPMX19_06397 at 162.090 kb on - strand, within MPMX19_06397 at 162.090 kb on - strand, within MPMX19_06397 at 162.090 kb on - strand, within MPMX19_06397 at 162.090 kb on - strand, within MPMX19_06397 at 162.090 kb on - strand, within MPMX19_06397 at 162.090 kb on - strand, within MPMX19_06397 at 162.090 kb on - strand, within MPMX19_06397 at 162.090 kb on - strand, within MPMX19_06397 at 162.090 kb on - strand, within MPMX19_06397 at 162.090 kb on - strand, within MPMX19_06397 at 162.090 kb on - strand, within MPMX19_06397 at 162.090 kb on - strand, within MPMX19_06397 at 162.101 kb on + strand, within MPMX19_06397 at 162.101 kb on + strand, within MPMX19_06397 at 162.101 kb on + strand, within MPMX19_06397 at 162.101 kb on + strand, within MPMX19_06397 at 162.101 kb on + strand, within MPMX19_06397 at 162.101 kb on + strand, within MPMX19_06397 at 162.101 kb on + strand, within MPMX19_06397 at 162.102 kb on - strand, within MPMX19_06397 at 162.102 kb on - strand, within MPMX19_06397 at 162.102 kb on - strand, within MPMX19_06397 at 162.102 kb on - strand, within MPMX19_06397 at 162.102 kb on - strand, within MPMX19_06397 at 162.102 kb on - strand, within MPMX19_06397 at 162.102 kb on - strand, within MPMX19_06397 at 162.290 kb on + strand at 162.290 kb on + strand at 162.290 kb on + strand at 162.291 kb on - strand at 162.291 kb on - strand at 162.291 kb on - strand at 162.291 kb on - strand at 162.291 kb on - strand at 162.291 kb on - strand at 162.302 kb on + strand at 162.303 kb on - strand at 162.303 kb on - strand at 162.303 kb on - strand at 162.303 kb on - strand at 162.333 kb on + strand at 162.333 kb on + strand at 162.334 kb on - strand at 162.343 kb on + strand at 162.343 kb on + strand at 162.343 kb on + strand at 162.344 kb on - strand at 162.344 kb on - strand at 162.344 kb on - strand at 162.344 kb on - strand at 162.344 kb on - strand at 162.369 kb on + strand at 162.369 kb on + strand at 162.369 kb on + strand at 162.369 kb on + strand at 162.369 kb on + strand at 162.369 kb on + strand at 162.369 kb on + strand at 162.369 kb on + strand at 162.369 kb on + strand at 162.369 kb on + strand at 162.370 kb on - strand at 162.370 kb on - strand at 162.370 kb on - strand at 162.370 kb on - strand at 162.370 kb on - strand at 162.370 kb on - strand at 162.386 kb on + strand at 162.387 kb on - strand at 162.387 kb on - strand at 162.432 kb on + strand at 162.432 kb on + strand at 162.433 kb on - strand at 162.433 kb on - strand at 162.433 kb on - strand at 162.433 kb on - strand at 162.433 kb on - strand at 162.540 kb on + strand at 162.540 kb on + strand at 162.540 kb on + strand at 162.540 kb on + strand at 162.540 kb on + strand at 162.540 kb on + strand at 162.540 kb on + strand at 162.540 kb on + strand at 162.540 kb on + strand at 162.540 kb on + strand at 162.541 kb on - strand at 162.541 kb on - strand at 162.541 kb on - strand at 162.541 kb on - strand at 162.541 kb on - strand at 162.541 kb on - strand at 162.541 kb on - strand at 162.541 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 160,187 + MPMX19_06394 0.43 -0.2 160,187 + MPMX19_06394 0.43 +0.7 160,187 + MPMX19_06394 0.43 +0.3 160,187 + MPMX19_06394 0.43 +0.6 160,187 + MPMX19_06394 0.43 -0.4 160,187 + MPMX19_06394 0.43 +0.3 160,187 + MPMX19_06394 0.43 +0.5 160,187 + MPMX19_06394 0.43 -1.1 160,188 - MPMX19_06394 0.43 +0.4 160,188 - MPMX19_06394 0.43 -0.3 160,188 - MPMX19_06394 0.43 -0.6 160,188 - MPMX19_06394 0.43 -1.1 160,188 - MPMX19_06394 0.43 -1.2 160,188 - MPMX19_06394 0.43 -0.2 160,336 + MPMX19_06394 0.65 -0.1 160,336 + MPMX19_06394 0.65 -2.0 160,336 + MPMX19_06394 0.65 -1.2 160,336 + MPMX19_06394 0.65 -1.3 160,336 + MPMX19_06394 0.65 -0.2 160,336 + MPMX19_06394 0.65 -0.7 160,336 + MPMX19_06394 0.65 +1.0 160,336 + MPMX19_06394 0.65 -1.4 160,336 + MPMX19_06394 0.65 -0.7 160,337 - MPMX19_06394 0.65 +0.2 160,337 - MPMX19_06394 0.65 +0.1 160,337 - MPMX19_06394 0.65 -0.9 160,337 - MPMX19_06394 0.65 +0.3 160,337 - MPMX19_06394 0.65 -1.3 160,337 - MPMX19_06394 0.65 +0.7 160,337 - MPMX19_06394 0.65 +0.5 160,337 - MPMX19_06394 0.65 +0.3 160,337 - MPMX19_06394 0.65 -1.0 160,337 - MPMX19_06394 0.65 -0.4 160,338 + MPMX19_06394 0.65 -1.2 160,338 + MPMX19_06394 0.65 -0.4 160,338 + MPMX19_06394 0.65 +0.7 160,338 + MPMX19_06394 0.65 -1.9 160,339 - MPMX19_06394 0.65 +0.4 160,339 - MPMX19_06394 0.65 +1.9 160,339 - MPMX19_06394 0.65 +0.0 160,417 + MPMX19_06394 0.77 +0.6 160,417 + MPMX19_06394 0.77 -1.9 160,417 + MPMX19_06394 0.77 -1.9 160,417 + MPMX19_06394 0.77 -0.6 160,418 - MPMX19_06394 0.77 -1.1 160,418 - MPMX19_06394 0.77 -0.1 160,418 - MPMX19_06394 0.77 -1.1 160,546 + +0.1 160,546 + -0.0 160,546 + -0.1 160,546 + -0.3 160,547 - +0.9 160,702 + MPMX19_06395 0.14 -2.0 160,703 - MPMX19_06395 0.15 -0.4 160,830 + MPMX19_06395 0.44 -0.3 160,830 + MPMX19_06395 0.44 +0.3 160,831 - MPMX19_06395 0.45 +0.3 160,831 - MPMX19_06395 0.45 +0.8 160,831 - MPMX19_06395 0.45 -1.1 160,847 + MPMX19_06395 0.48 -0.6 160,902 + MPMX19_06395 0.61 -0.8 161,040 + +0.4 161,041 - -1.3 161,041 - -0.1 161,064 + +0.2 161,064 + +0.3 161,064 + -0.4 161,064 + -1.6 161,064 + -1.1 161,064 + +0.3 161,064 + -1.6 161,064 + -1.1 161,065 - -1.7 161,065 - -1.5 161,065 - +0.8 161,065 - -2.6 161,065 - +1.9 161,203 + MPMX19_06396 0.22 -1.6 161,203 + MPMX19_06396 0.22 +0.7 161,203 + MPMX19_06396 0.22 -0.6 161,203 + MPMX19_06396 0.22 -0.7 161,203 + MPMX19_06396 0.22 -1.3 161,203 + MPMX19_06396 0.22 -1.1 161,204 - MPMX19_06396 0.22 -0.7 161,204 - MPMX19_06396 0.22 -0.5 161,204 - MPMX19_06396 0.22 -0.3 161,204 - MPMX19_06396 0.22 +0.9 161,403 + MPMX19_06396 0.64 -0.9 161,404 - MPMX19_06396 0.65 -0.8 161,404 - MPMX19_06396 0.65 -1.3 161,455 + MPMX19_06396 0.75 +0.2 161,455 + MPMX19_06396 0.75 -1.4 161,455 + MPMX19_06396 0.75 -1.3 161,455 + MPMX19_06396 0.75 -0.1 161,455 + MPMX19_06396 0.75 -1.2 161,456 - MPMX19_06396 0.76 -1.6 161,456 - MPMX19_06396 0.76 +0.9 161,456 - MPMX19_06396 0.76 -0.9 161,456 - MPMX19_06396 0.76 +0.5 161,456 - MPMX19_06396 0.76 -0.2 161,456 - MPMX19_06396 0.76 -1.3 161,456 - MPMX19_06396 0.76 -1.6 161,456 - MPMX19_06396 0.76 -1.1 161,456 - MPMX19_06396 0.76 -0.9 161,456 - MPMX19_06396 0.76 -0.6 161,456 - MPMX19_06396 0.76 -0.4 161,456 - MPMX19_06396 0.76 -1.4 161,729 + MPMX19_06397 0.18 +0.4 161,730 - MPMX19_06397 0.18 -0.1 161,810 + MPMX19_06397 0.29 +0.3 161,825 + MPMX19_06397 0.31 -0.4 161,825 + MPMX19_06397 0.31 -1.0 161,825 + MPMX19_06397 0.31 -1.0 161,907 - MPMX19_06397 0.42 +0.1 161,907 - MPMX19_06397 0.42 +0.4 161,907 - MPMX19_06397 0.42 -0.6 161,996 + MPMX19_06397 0.53 +0.3 161,996 + MPMX19_06397 0.53 -0.5 161,996 + MPMX19_06397 0.53 +1.1 161,996 + MPMX19_06397 0.53 -1.6 161,997 - MPMX19_06397 0.53 -0.3 161,997 - MPMX19_06397 0.53 -1.4 161,997 - MPMX19_06397 0.53 +1.0 161,997 - MPMX19_06397 0.53 -0.1 161,997 - MPMX19_06397 0.53 -0.0 161,997 - MPMX19_06397 0.53 -1.1 161,997 - MPMX19_06397 0.53 +0.5 161,997 - MPMX19_06397 0.53 -1.3 162,089 + MPMX19_06397 0.65 -0.9 162,089 + MPMX19_06397 0.65 -0.7 162,089 + MPMX19_06397 0.65 -1.0 162,089 + MPMX19_06397 0.65 -0.4 162,089 + MPMX19_06397 0.65 -0.4 162,089 + MPMX19_06397 0.65 +1.9 162,089 + MPMX19_06397 0.65 -0.0 162,089 + MPMX19_06397 0.65 -0.2 162,089 + MPMX19_06397 0.65 -0.2 162,090 - MPMX19_06397 0.65 -0.3 162,090 - MPMX19_06397 0.65 -2.0 162,090 - MPMX19_06397 0.65 -2.8 162,090 - MPMX19_06397 0.65 -0.0 162,090 - MPMX19_06397 0.65 -0.0 162,090 - MPMX19_06397 0.65 +0.3 162,090 - MPMX19_06397 0.65 -1.2 162,090 - MPMX19_06397 0.65 -1.4 162,090 - MPMX19_06397 0.65 +0.4 162,090 - MPMX19_06397 0.65 +0.8 162,090 - MPMX19_06397 0.65 +1.2 162,090 - MPMX19_06397 0.65 -0.2 162,101 + MPMX19_06397 0.67 -0.3 162,101 + MPMX19_06397 0.67 -0.4 162,101 + MPMX19_06397 0.67 +0.4 162,101 + MPMX19_06397 0.67 +0.1 162,101 + MPMX19_06397 0.67 +0.6 162,101 + MPMX19_06397 0.67 -0.4 162,101 + MPMX19_06397 0.67 -0.3 162,102 - MPMX19_06397 0.67 -0.4 162,102 - MPMX19_06397 0.67 +1.5 162,102 - MPMX19_06397 0.67 +0.1 162,102 - MPMX19_06397 0.67 -0.5 162,102 - MPMX19_06397 0.67 +0.1 162,102 - MPMX19_06397 0.67 +0.2 162,102 - MPMX19_06397 0.67 +0.9 162,290 + -1.5 162,290 + -0.2 162,290 + -0.2 162,291 - -0.7 162,291 - -0.9 162,291 - -0.4 162,291 - +1.3 162,291 - -0.1 162,291 - -0.7 162,302 + +0.1 162,303 - -2.5 162,303 - +1.9 162,303 - -1.8 162,303 - +0.1 162,333 + -2.0 162,333 + +0.5 162,334 - -1.7 162,343 + +1.2 162,343 + -0.6 162,343 + -0.0 162,344 - -0.3 162,344 - -1.1 162,344 - -0.7 162,344 - +0.0 162,344 - -0.5 162,369 + -0.7 162,369 + -0.6 162,369 + -0.2 162,369 + -0.4 162,369 + -0.7 162,369 + +1.6 162,369 + -0.7 162,369 + +0.1 162,369 + -1.7 162,369 + -0.6 162,370 - -0.1 162,370 - +0.2 162,370 - +1.0 162,370 - -1.6 162,370 - +0.2 162,370 - +1.9 162,386 + +0.9 162,387 - -0.9 162,387 - -1.7 162,432 + -0.1 162,432 + -1.5 162,433 - -2.2 162,433 - -1.1 162,433 - +0.4 162,433 - -0.0 162,433 - +0.4 162,540 + -0.8 162,540 + -0.4 162,540 + +0.1 162,540 + -2.1 162,540 + -0.1 162,540 + -1.6 162,540 + +0.1 162,540 + +0.5 162,540 + -1.6 162,540 + -0.1 162,541 - +0.3 162,541 - -1.0 162,541 - -0.1 162,541 - -0.3 162,541 - +0.3 162,541 - -1.5 162,541 - +0.3 162,541 - -0.5
Or see this region's nucleotide sequence