Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_06381 and MPMX19_06382 are separated by 114 nucleotides MPMX19_06382 and MPMX19_06383 are separated by 301 nucleotides
MPMX19_06381: MPMX19_06381 - putative manganese efflux pump MntP, at 149,644 to 150,210
_06381
MPMX19_06382: MPMX19_06382 - putative MFS-type transporter YfcJ, at 150,325 to 151,506
_06382
MPMX19_06383: MPMX19_06383 - hypothetical protein, at 151,808 to 152,494
_06383
Position (kb)
150
151
152 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 149.371 kb on - strand at 149.375 kb on + strand at 149.389 kb on + strand at 149.453 kb on + strand at 149.453 kb on + strand at 149.461 kb on + strand at 149.483 kb on + strand at 149.483 kb on + strand at 149.483 kb on + strand at 149.483 kb on + strand at 149.484 kb on - strand at 149.666 kb on + strand at 149.666 kb on + strand at 149.666 kb on + strand at 150.009 kb on - strand, within MPMX19_06381 at 150.009 kb on - strand, within MPMX19_06381 at 150.286 kb on + strand at 150.341 kb on + strand at 150.567 kb on + strand, within MPMX19_06382 at 150.568 kb on + strand, within MPMX19_06382 at 150.568 kb on + strand, within MPMX19_06382 at 150.569 kb on - strand, within MPMX19_06382 at 150.569 kb on - strand, within MPMX19_06382 at 150.596 kb on + strand, within MPMX19_06382 at 150.597 kb on - strand, within MPMX19_06382 at 150.597 kb on - strand, within MPMX19_06382 at 150.597 kb on - strand, within MPMX19_06382 at 150.597 kb on - strand, within MPMX19_06382 at 151.066 kb on + strand, within MPMX19_06382 at 151.067 kb on - strand, within MPMX19_06382 at 151.067 kb on - strand, within MPMX19_06382 at 151.103 kb on - strand, within MPMX19_06382 at 151.345 kb on + strand, within MPMX19_06382 at 151.345 kb on + strand, within MPMX19_06382 at 151.345 kb on + strand, within MPMX19_06382 at 151.345 kb on + strand, within MPMX19_06382 at 151.346 kb on - strand, within MPMX19_06382 at 151.400 kb on + strand at 151.401 kb on - strand at 151.401 kb on - strand at 151.401 kb on - strand at 151.401 kb on - strand at 151.401 kb on - strand at 151.401 kb on - strand at 151.401 kb on - strand at 151.401 kb on - strand at 151.504 kb on + strand at 151.505 kb on - strand at 151.505 kb on - strand at 151.505 kb on - strand at 151.609 kb on + strand at 151.609 kb on + strand at 151.609 kb on + strand at 151.609 kb on + strand at 151.610 kb on - strand at 151.610 kb on - strand at 151.610 kb on - strand at 151.635 kb on - strand at 151.635 kb on - strand at 151.643 kb on + strand at 151.643 kb on + strand at 151.643 kb on + strand at 151.644 kb on - strand at 151.644 kb on - strand at 151.644 kb on - strand at 151.798 kb on + strand at 151.798 kb on + strand at 151.798 kb on + strand at 151.810 kb on - strand at 151.827 kb on + strand at 151.838 kb on + strand at 151.838 kb on + strand at 151.838 kb on + strand at 151.839 kb on - strand at 151.883 kb on + strand, within MPMX19_06383 at 151.923 kb on + strand, within MPMX19_06383 at 151.923 kb on + strand, within MPMX19_06383 at 151.923 kb on + strand, within MPMX19_06383 at 151.924 kb on - strand, within MPMX19_06383 at 152.028 kb on - strand, within MPMX19_06383 at 152.028 kb on - strand, within MPMX19_06383 at 152.287 kb on + strand, within MPMX19_06383 at 152.288 kb on - strand, within MPMX19_06383 at 152.421 kb on + strand, within MPMX19_06383 at 152.422 kb on - strand, within MPMX19_06383 at 152.422 kb on - strand, within MPMX19_06383 at 152.422 kb on - strand, within MPMX19_06383 at 152.490 kb on + strand at 152.490 kb on + strand at 152.490 kb on + strand at 152.490 kb on + strand at 152.490 kb on + strand at 152.490 kb on + strand at 152.490 kb on + strand at 152.490 kb on + strand at 152.491 kb on - strand at 152.491 kb on - strand at 152.491 kb on - strand at 152.491 kb on - strand at 152.491 kb on - strand at 152.491 kb on - strand at 152.491 kb on - strand at 152.494 kb on + strand at 152.494 kb on + strand at 152.494 kb on + strand at 152.494 kb on + strand at 152.494 kb on + strand at 152.494 kb on + strand at 152.496 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 149,371 - -0.0 149,375 + +1.7 149,389 + +1.7 149,453 + -0.1 149,453 + +0.7 149,461 + -0.4 149,483 + -0.4 149,483 + -1.5 149,483 + -1.8 149,483 + -1.4 149,484 - +0.2 149,666 + +1.1 149,666 + -0.1 149,666 + +1.0 150,009 - MPMX19_06381 0.64 +1.3 150,009 - MPMX19_06381 0.64 -0.2 150,286 + +0.3 150,341 + -1.3 150,567 + MPMX19_06382 0.20 -0.0 150,568 + MPMX19_06382 0.21 -2.1 150,568 + MPMX19_06382 0.21 -1.4 150,569 - MPMX19_06382 0.21 -1.2 150,569 - MPMX19_06382 0.21 -0.1 150,596 + MPMX19_06382 0.23 -0.7 150,597 - MPMX19_06382 0.23 -0.8 150,597 - MPMX19_06382 0.23 -1.7 150,597 - MPMX19_06382 0.23 -1.1 150,597 - MPMX19_06382 0.23 +0.1 151,066 + MPMX19_06382 0.63 +0.1 151,067 - MPMX19_06382 0.63 -0.9 151,067 - MPMX19_06382 0.63 -1.7 151,103 - MPMX19_06382 0.66 -0.8 151,345 + MPMX19_06382 0.86 -0.6 151,345 + MPMX19_06382 0.86 -0.6 151,345 + MPMX19_06382 0.86 +0.9 151,345 + MPMX19_06382 0.86 +0.3 151,346 - MPMX19_06382 0.86 -1.3 151,400 + -0.9 151,401 - -0.1 151,401 - +1.9 151,401 - +0.5 151,401 - -0.9 151,401 - +0.5 151,401 - +1.2 151,401 - -0.3 151,401 - -0.1 151,504 + +1.5 151,505 - -0.4 151,505 - -0.7 151,505 - -0.1 151,609 + +1.2 151,609 + -0.4 151,609 + -1.1 151,609 + +1.2 151,610 - -1.9 151,610 - -0.2 151,610 - -0.2 151,635 - +0.0 151,635 - -0.6 151,643 + +1.0 151,643 + -1.4 151,643 + +0.5 151,644 - +1.4 151,644 - -0.2 151,644 - -0.3 151,798 + -1.1 151,798 + -0.6 151,798 + +0.0 151,810 - -0.5 151,827 + +1.0 151,838 + +0.2 151,838 + -1.8 151,838 + -0.4 151,839 - +1.2 151,883 + MPMX19_06383 0.11 -1.6 151,923 + MPMX19_06383 0.17 -0.8 151,923 + MPMX19_06383 0.17 +0.6 151,923 + MPMX19_06383 0.17 +0.3 151,924 - MPMX19_06383 0.17 +0.3 152,028 - MPMX19_06383 0.32 +0.3 152,028 - MPMX19_06383 0.32 -0.4 152,287 + MPMX19_06383 0.70 -1.4 152,288 - MPMX19_06383 0.70 +0.9 152,421 + MPMX19_06383 0.89 -0.9 152,422 - MPMX19_06383 0.89 +0.1 152,422 - MPMX19_06383 0.89 -0.5 152,422 - MPMX19_06383 0.89 -1.9 152,490 + +0.7 152,490 + +0.3 152,490 + -1.2 152,490 + -0.6 152,490 + -0.3 152,490 + +1.2 152,490 + +0.2 152,490 + -1.5 152,491 - -0.1 152,491 - -1.6 152,491 - -0.8 152,491 - -0.9 152,491 - -1.3 152,491 - +0.4 152,491 - -0.1 152,494 + -0.3 152,494 + -1.0 152,494 + -0.6 152,494 + +0.6 152,494 + -0.4 152,494 + +1.2 152,496 - -1.7
Or see this region's nucleotide sequence