Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_06372 and MPMX19_06373 are separated by 139 nucleotides MPMX19_06373 and MPMX19_06374 are separated by 133 nucleotides MPMX19_06374 and MPMX19_06375 are separated by 76 nucleotides
MPMX19_06372: MPMX19_06372 - hypothetical protein, at 139,944 to 141,080
_06372
MPMX19_06373: MPMX19_06373 - Lipoprotein signal peptidase, at 141,220 to 141,708
_06373
MPMX19_06374: MPMX19_06374 - HTH-type transcriptional regulator HmrR, at 141,842 to 142,264
_06374
MPMX19_06375: MPMX19_06375 - Zinc/cadmium/lead-transporting P-type ATPase, at 142,341 to 144,602
_06375
Position (kb) 141
142
143 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 140.899 kb on + strand, within MPMX19_06372 at 140.899 kb on + strand, within MPMX19_06372 at 141.138 kb on + strand at 141.139 kb on - strand at 141.149 kb on + strand at 141.149 kb on + strand at 141.149 kb on + strand at 141.149 kb on + strand at 141.149 kb on + strand at 141.150 kb on - strand at 141.150 kb on - strand at 141.150 kb on - strand at 141.150 kb on - strand at 141.150 kb on - strand at 141.606 kb on + strand, within MPMX19_06373 at 141.606 kb on + strand, within MPMX19_06373 at 141.606 kb on + strand, within MPMX19_06373 at 141.607 kb on - strand, within MPMX19_06373 at 141.607 kb on - strand, within MPMX19_06373 at 141.607 kb on - strand, within MPMX19_06373 at 141.664 kb on - strand at 141.664 kb on - strand at 141.677 kb on + strand at 141.677 kb on + strand at 141.677 kb on + strand at 141.677 kb on + strand at 141.677 kb on + strand at 141.677 kb on + strand at 141.677 kb on + strand at 141.677 kb on + strand at 141.677 kb on + strand at 141.677 kb on + strand at 141.677 kb on + strand at 141.677 kb on + strand at 141.677 kb on + strand at 141.677 kb on + strand at 141.678 kb on - strand at 141.678 kb on - strand at 141.678 kb on - strand at 141.678 kb on - strand at 141.678 kb on - strand at 141.678 kb on - strand at 141.678 kb on - strand at 141.678 kb on - strand at 141.678 kb on - strand at 141.777 kb on + strand at 141.777 kb on + strand at 141.778 kb on - strand at 141.782 kb on + strand at 141.782 kb on + strand at 141.782 kb on + strand at 141.783 kb on - strand at 141.783 kb on - strand at 141.783 kb on - strand at 141.783 kb on - strand at 141.830 kb on + strand at 141.830 kb on + strand at 141.830 kb on + strand at 141.831 kb on - strand at 141.831 kb on - strand at 141.831 kb on - strand at 141.831 kb on - strand at 142.140 kb on + strand, within MPMX19_06374 at 142.140 kb on + strand, within MPMX19_06374 at 142.140 kb on + strand, within MPMX19_06374 at 142.140 kb on + strand, within MPMX19_06374 at 142.141 kb on - strand, within MPMX19_06374 at 142.141 kb on - strand, within MPMX19_06374 at 142.141 kb on - strand, within MPMX19_06374 at 142.141 kb on - strand, within MPMX19_06374 at 142.141 kb on - strand, within MPMX19_06374 at 142.141 kb on - strand, within MPMX19_06374 at 142.141 kb on - strand, within MPMX19_06374 at 142.197 kb on + strand, within MPMX19_06374 at 142.197 kb on + strand, within MPMX19_06374 at 142.197 kb on + strand, within MPMX19_06374 at 142.197 kb on + strand, within MPMX19_06374 at 142.197 kb on + strand, within MPMX19_06374 at 142.197 kb on + strand, within MPMX19_06374 at 142.197 kb on + strand, within MPMX19_06374 at 142.197 kb on + strand, within MPMX19_06374 at 142.198 kb on - strand, within MPMX19_06374 at 142.198 kb on - strand, within MPMX19_06374 at 142.198 kb on - strand, within MPMX19_06374 at 142.198 kb on - strand, within MPMX19_06374 at 142.198 kb on - strand, within MPMX19_06374 at 142.198 kb on - strand, within MPMX19_06374 at 142.200 kb on + strand, within MPMX19_06374 at 142.305 kb on + strand at 142.307 kb on - strand at 142.341 kb on - strand at 142.341 kb on - strand at 142.623 kb on - strand, within MPMX19_06375 at 142.623 kb on - strand, within MPMX19_06375 at 142.644 kb on + strand, within MPMX19_06375 at 142.645 kb on - strand, within MPMX19_06375 at 142.809 kb on + strand, within MPMX19_06375 at 142.809 kb on + strand, within MPMX19_06375 at 142.809 kb on + strand, within MPMX19_06375 at 142.809 kb on + strand, within MPMX19_06375 at 142.809 kb on + strand, within MPMX19_06375 at 142.810 kb on - strand, within MPMX19_06375 at 142.810 kb on - strand, within MPMX19_06375 at 142.810 kb on - strand, within MPMX19_06375 at 142.810 kb on - strand, within MPMX19_06375 at 142.810 kb on - strand, within MPMX19_06375
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 140,899 + MPMX19_06372 0.84 +0.9 140,899 + MPMX19_06372 0.84 -0.9 141,138 + -0.7 141,139 - +0.9 141,149 + +0.1 141,149 + +0.2 141,149 + +0.5 141,149 + -0.9 141,149 + -0.6 141,150 - -1.7 141,150 - -1.2 141,150 - -1.6 141,150 - -0.6 141,150 - -0.1 141,606 + MPMX19_06373 0.79 -2.8 141,606 + MPMX19_06373 0.79 -0.6 141,606 + MPMX19_06373 0.79 -0.4 141,607 - MPMX19_06373 0.79 -1.1 141,607 - MPMX19_06373 0.79 +0.8 141,607 - MPMX19_06373 0.79 +0.5 141,664 - +0.9 141,664 - +0.3 141,677 + +0.1 141,677 + +0.3 141,677 + -1.1 141,677 + -1.4 141,677 + -1.2 141,677 + -1.4 141,677 + +0.6 141,677 + -0.8 141,677 + -0.8 141,677 + -0.6 141,677 + -0.9 141,677 + +0.1 141,677 + +0.3 141,677 + -0.0 141,678 - +0.5 141,678 - -0.4 141,678 - -1.2 141,678 - -0.9 141,678 - -0.7 141,678 - -1.4 141,678 - +0.5 141,678 - -1.6 141,678 - +0.0 141,777 + -0.5 141,777 + -0.7 141,778 - +1.3 141,782 + +0.5 141,782 + +0.9 141,782 + +1.1 141,783 - -2.2 141,783 - +0.9 141,783 - +0.3 141,783 - -1.4 141,830 + -2.4 141,830 + -2.3 141,830 + -0.9 141,831 - +0.3 141,831 - +0.4 141,831 - +0.2 141,831 - -0.4 142,140 + MPMX19_06374 0.70 -1.1 142,140 + MPMX19_06374 0.70 -1.0 142,140 + MPMX19_06374 0.70 -0.2 142,140 + MPMX19_06374 0.70 +0.7 142,141 - MPMX19_06374 0.71 -0.1 142,141 - MPMX19_06374 0.71 -0.4 142,141 - MPMX19_06374 0.71 -0.4 142,141 - MPMX19_06374 0.71 -0.7 142,141 - MPMX19_06374 0.71 -0.7 142,141 - MPMX19_06374 0.71 -0.6 142,141 - MPMX19_06374 0.71 -1.7 142,197 + MPMX19_06374 0.84 +0.5 142,197 + MPMX19_06374 0.84 +0.9 142,197 + MPMX19_06374 0.84 -0.4 142,197 + MPMX19_06374 0.84 +0.2 142,197 + MPMX19_06374 0.84 -2.4 142,197 + MPMX19_06374 0.84 -0.3 142,197 + MPMX19_06374 0.84 +0.5 142,197 + MPMX19_06374 0.84 +0.0 142,198 - MPMX19_06374 0.84 -0.6 142,198 - MPMX19_06374 0.84 +0.2 142,198 - MPMX19_06374 0.84 -2.0 142,198 - MPMX19_06374 0.84 +0.7 142,198 - MPMX19_06374 0.84 +0.5 142,198 - MPMX19_06374 0.84 -1.0 142,200 + MPMX19_06374 0.85 -0.8 142,305 + -2.1 142,307 - +0.3 142,341 - -0.4 142,341 - +0.7 142,623 - MPMX19_06375 0.12 -0.4 142,623 - MPMX19_06375 0.12 -0.6 142,644 + MPMX19_06375 0.13 -0.4 142,645 - MPMX19_06375 0.13 +0.9 142,809 + MPMX19_06375 0.21 +1.5 142,809 + MPMX19_06375 0.21 +1.3 142,809 + MPMX19_06375 0.21 -1.9 142,809 + MPMX19_06375 0.21 -0.2 142,809 + MPMX19_06375 0.21 -1.6 142,810 - MPMX19_06375 0.21 +1.9 142,810 - MPMX19_06375 0.21 -0.6 142,810 - MPMX19_06375 0.21 -0.5 142,810 - MPMX19_06375 0.21 -0.4 142,810 - MPMX19_06375 0.21 -1.3
Or see this region's nucleotide sequence