Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_06340 and MPMX19_06341 are separated by 75 nucleotides MPMX19_06341 and MPMX19_06342 are separated by 148 nucleotides MPMX19_06342 and MPMX19_06343 are separated by 94 nucleotides MPMX19_06343 and MPMX19_06344 are separated by 40 nucleotides MPMX19_06344 and MPMX19_06345 are separated by 313 nucleotides
MPMX19_06340: MPMX19_06340 - hypothetical protein, at 108,264 to 108,413
_06340
MPMX19_06341: MPMX19_06341 - hypothetical protein, at 108,489 to 108,833
_06341
MPMX19_06342: MPMX19_06342 - hypothetical protein, at 108,982 to 109,251
_06342
MPMX19_06343: MPMX19_06343 - Acetyl-CoA acetyltransferase, at 109,346 to 110,533
_06343
MPMX19_06344: MPMX19_06344 - hypothetical protein, at 110,574 to 110,780
_06344
MPMX19_06345: MPMX19_06345 - Pyruvate synthase subunit PorC, at 111,094 to 111,651
_06345
Position (kb) 109
110
111 Strain fitness (log2 ratio) -2
-1
0
1
2 at 108.348 kb on + strand, within MPMX19_06340 at 108.349 kb on - strand, within MPMX19_06340 at 108.485 kb on + strand at 108.485 kb on + strand at 108.485 kb on + strand at 108.486 kb on - strand at 108.486 kb on - strand at 108.606 kb on + strand, within MPMX19_06341 at 108.606 kb on + strand, within MPMX19_06341 at 108.606 kb on + strand, within MPMX19_06341 at 108.606 kb on + strand, within MPMX19_06341 at 108.606 kb on + strand, within MPMX19_06341 at 108.606 kb on + strand, within MPMX19_06341 at 108.606 kb on + strand, within MPMX19_06341 at 108.606 kb on + strand, within MPMX19_06341 at 108.607 kb on - strand, within MPMX19_06341 at 108.607 kb on - strand, within MPMX19_06341 at 108.607 kb on - strand, within MPMX19_06341 at 108.607 kb on - strand, within MPMX19_06341 at 108.607 kb on - strand, within MPMX19_06341 at 108.607 kb on - strand, within MPMX19_06341 at 108.607 kb on - strand, within MPMX19_06341 at 108.607 kb on - strand, within MPMX19_06341 at 108.825 kb on - strand at 108.832 kb on - strand at 108.855 kb on + strand at 108.855 kb on + strand at 108.859 kb on + strand at 108.879 kb on - strand at 108.879 kb on - strand at 108.934 kb on - strand at 108.987 kb on + strand at 108.988 kb on - strand at 108.988 kb on - strand at 109.011 kb on + strand, within MPMX19_06342 at 109.011 kb on + strand, within MPMX19_06342 at 109.011 kb on + strand, within MPMX19_06342 at 109.011 kb on + strand, within MPMX19_06342 at 109.012 kb on - strand, within MPMX19_06342 at 109.136 kb on + strand, within MPMX19_06342 at 109.136 kb on + strand, within MPMX19_06342 at 109.136 kb on + strand, within MPMX19_06342 at 109.136 kb on + strand, within MPMX19_06342 at 109.136 kb on + strand, within MPMX19_06342 at 109.136 kb on + strand, within MPMX19_06342 at 109.136 kb on + strand, within MPMX19_06342 at 109.136 kb on + strand, within MPMX19_06342 at 109.136 kb on + strand, within MPMX19_06342 at 109.136 kb on + strand, within MPMX19_06342 at 109.136 kb on + strand, within MPMX19_06342 at 109.136 kb on + strand, within MPMX19_06342 at 109.137 kb on - strand, within MPMX19_06342 at 109.137 kb on - strand, within MPMX19_06342 at 109.137 kb on - strand, within MPMX19_06342 at 109.137 kb on - strand, within MPMX19_06342 at 109.137 kb on - strand, within MPMX19_06342 at 109.137 kb on - strand, within MPMX19_06342 at 109.137 kb on - strand, within MPMX19_06342 at 109.137 kb on - strand, within MPMX19_06342 at 109.137 kb on - strand, within MPMX19_06342 at 109.137 kb on - strand, within MPMX19_06342 at 109.137 kb on - strand, within MPMX19_06342 at 109.137 kb on - strand, within MPMX19_06342 at 109.186 kb on + strand, within MPMX19_06342 at 109.186 kb on + strand, within MPMX19_06342 at 109.186 kb on + strand, within MPMX19_06342 at 109.186 kb on + strand, within MPMX19_06342 at 109.186 kb on + strand, within MPMX19_06342 at 109.186 kb on + strand, within MPMX19_06342 at 109.186 kb on + strand, within MPMX19_06342 at 109.186 kb on + strand, within MPMX19_06342 at 109.186 kb on + strand, within MPMX19_06342 at 109.186 kb on + strand, within MPMX19_06342 at 109.186 kb on + strand, within MPMX19_06342 at 109.186 kb on + strand, within MPMX19_06342 at 109.186 kb on + strand, within MPMX19_06342 at 109.186 kb on + strand, within MPMX19_06342 at 109.186 kb on + strand, within MPMX19_06342 at 109.186 kb on + strand, within MPMX19_06342 at 109.186 kb on + strand, within MPMX19_06342 at 109.186 kb on + strand, within MPMX19_06342 at 109.186 kb on + strand, within MPMX19_06342 at 109.187 kb on - strand, within MPMX19_06342 at 109.187 kb on - strand, within MPMX19_06342 at 109.187 kb on - strand, within MPMX19_06342 at 109.187 kb on - strand, within MPMX19_06342 at 109.187 kb on - strand, within MPMX19_06342 at 109.187 kb on - strand, within MPMX19_06342 at 109.187 kb on - strand, within MPMX19_06342 at 109.187 kb on - strand, within MPMX19_06342 at 109.187 kb on - strand, within MPMX19_06342 at 109.188 kb on + strand, within MPMX19_06342 at 109.188 kb on + strand, within MPMX19_06342 at 109.188 kb on + strand, within MPMX19_06342 at 109.188 kb on + strand, within MPMX19_06342 at 109.189 kb on - strand, within MPMX19_06342 at 109.189 kb on - strand, within MPMX19_06342 at 109.189 kb on - strand, within MPMX19_06342 at 109.189 kb on - strand, within MPMX19_06342 at 109.189 kb on - strand, within MPMX19_06342 at 109.249 kb on + strand at 109.250 kb on - strand at 109.342 kb on + strand at 109.342 kb on + strand at 109.342 kb on + strand at 109.342 kb on + strand at 109.342 kb on + strand at 109.342 kb on + strand at 109.342 kb on + strand at 109.343 kb on - strand at 109.343 kb on - strand at 109.343 kb on - strand at 109.343 kb on - strand at 109.343 kb on - strand at 109.343 kb on - strand at 109.718 kb on + strand, within MPMX19_06343 at 109.718 kb on + strand, within MPMX19_06343 at 109.718 kb on + strand, within MPMX19_06343 at 109.718 kb on + strand, within MPMX19_06343 at 109.719 kb on - strand, within MPMX19_06343 at 109.719 kb on - strand, within MPMX19_06343 at 109.719 kb on - strand, within MPMX19_06343 at 109.719 kb on - strand, within MPMX19_06343 at 109.719 kb on - strand, within MPMX19_06343 at 109.719 kb on - strand, within MPMX19_06343 at 109.784 kb on + strand, within MPMX19_06343 at 109.784 kb on + strand, within MPMX19_06343 at 109.784 kb on + strand, within MPMX19_06343 at 109.785 kb on - strand, within MPMX19_06343 at 109.785 kb on - strand, within MPMX19_06343 at 109.785 kb on - strand, within MPMX19_06343 at 109.785 kb on - strand, within MPMX19_06343 at 109.785 kb on - strand, within MPMX19_06343 at 109.785 kb on - strand, within MPMX19_06343 at 109.785 kb on - strand, within MPMX19_06343 at 109.785 kb on - strand, within MPMX19_06343 at 110.006 kb on - strand, within MPMX19_06343 at 110.183 kb on + strand, within MPMX19_06343 at 110.183 kb on + strand, within MPMX19_06343 at 110.183 kb on + strand, within MPMX19_06343 at 110.183 kb on + strand, within MPMX19_06343 at 110.183 kb on + strand, within MPMX19_06343 at 110.183 kb on + strand, within MPMX19_06343 at 110.183 kb on + strand, within MPMX19_06343 at 110.183 kb on + strand, within MPMX19_06343 at 110.183 kb on + strand, within MPMX19_06343 at 110.183 kb on + strand, within MPMX19_06343 at 110.183 kb on + strand, within MPMX19_06343 at 110.183 kb on + strand, within MPMX19_06343 at 110.184 kb on - strand, within MPMX19_06343 at 110.184 kb on - strand, within MPMX19_06343 at 110.184 kb on - strand, within MPMX19_06343 at 110.184 kb on - strand, within MPMX19_06343 at 110.184 kb on - strand, within MPMX19_06343 at 110.184 kb on - strand, within MPMX19_06343 at 110.184 kb on - strand, within MPMX19_06343 at 110.184 kb on - strand, within MPMX19_06343 at 110.188 kb on + strand, within MPMX19_06343 at 110.188 kb on + strand, within MPMX19_06343 at 110.189 kb on - strand, within MPMX19_06343 at 110.573 kb on + strand at 110.573 kb on + strand at 110.573 kb on + strand at 110.573 kb on + strand at 110.573 kb on + strand at 110.573 kb on + strand at 110.573 kb on + strand at 110.574 kb on - strand at 110.574 kb on - strand at 110.574 kb on - strand at 110.574 kb on - strand at 110.574 kb on - strand at 110.574 kb on - strand at 110.574 kb on - strand at 110.574 kb on - strand at 110.574 kb on - strand at 110.937 kb on + strand at 111.061 kb on + strand at 111.110 kb on + strand at 111.110 kb on + strand at 111.111 kb on - strand at 111.330 kb on + strand, within MPMX19_06345 at 111.331 kb on - strand, within MPMX19_06345 at 111.367 kb on + strand, within MPMX19_06345 at 111.367 kb on + strand, within MPMX19_06345 at 111.367 kb on + strand, within MPMX19_06345 at 111.368 kb on - strand, within MPMX19_06345 at 111.368 kb on - strand, within MPMX19_06345 at 111.368 kb on - strand, within MPMX19_06345 at 111.368 kb on - strand, within MPMX19_06345 at 111.368 kb on - strand, within MPMX19_06345 at 111.368 kb on - strand, within MPMX19_06345 at 111.377 kb on + strand, within MPMX19_06345 at 111.377 kb on + strand, within MPMX19_06345 at 111.377 kb on + strand, within MPMX19_06345 at 111.377 kb on + strand, within MPMX19_06345 at 111.378 kb on - strand, within MPMX19_06345 at 111.378 kb on - strand, within MPMX19_06345
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 108,348 + MPMX19_06340 0.56 -1.8 108,349 - MPMX19_06340 0.57 -0.6 108,485 + -1.3 108,485 + +0.2 108,485 + +0.8 108,486 - -0.3 108,486 - +0.1 108,606 + MPMX19_06341 0.34 -1.3 108,606 + MPMX19_06341 0.34 -0.9 108,606 + MPMX19_06341 0.34 -1.4 108,606 + MPMX19_06341 0.34 +0.3 108,606 + MPMX19_06341 0.34 -1.0 108,606 + MPMX19_06341 0.34 -0.7 108,606 + MPMX19_06341 0.34 +2.3 108,606 + MPMX19_06341 0.34 -0.2 108,607 - MPMX19_06341 0.34 -0.8 108,607 - MPMX19_06341 0.34 -0.7 108,607 - MPMX19_06341 0.34 +0.8 108,607 - MPMX19_06341 0.34 +0.6 108,607 - MPMX19_06341 0.34 -0.9 108,607 - MPMX19_06341 0.34 +0.5 108,607 - MPMX19_06341 0.34 +0.3 108,607 - MPMX19_06341 0.34 -0.9 108,825 - +0.4 108,832 - +1.1 108,855 + -1.9 108,855 + -0.5 108,859 + -0.9 108,879 - -0.3 108,879 - -0.1 108,934 - -0.7 108,987 + -1.1 108,988 - +1.9 108,988 - -1.3 109,011 + MPMX19_06342 0.11 -0.7 109,011 + MPMX19_06342 0.11 -0.7 109,011 + MPMX19_06342 0.11 -0.7 109,011 + MPMX19_06342 0.11 -0.1 109,012 - MPMX19_06342 0.11 +0.1 109,136 + MPMX19_06342 0.57 -1.1 109,136 + MPMX19_06342 0.57 -1.6 109,136 + MPMX19_06342 0.57 -1.0 109,136 + MPMX19_06342 0.57 +0.9 109,136 + MPMX19_06342 0.57 -0.4 109,136 + MPMX19_06342 0.57 -0.2 109,136 + MPMX19_06342 0.57 +0.9 109,136 + MPMX19_06342 0.57 -0.9 109,136 + MPMX19_06342 0.57 +0.6 109,136 + MPMX19_06342 0.57 +0.5 109,136 + MPMX19_06342 0.57 +0.9 109,136 + MPMX19_06342 0.57 -0.9 109,137 - MPMX19_06342 0.57 +0.9 109,137 - MPMX19_06342 0.57 -0.9 109,137 - MPMX19_06342 0.57 -1.2 109,137 - MPMX19_06342 0.57 -0.9 109,137 - MPMX19_06342 0.57 -1.4 109,137 - MPMX19_06342 0.57 -1.6 109,137 - MPMX19_06342 0.57 -0.3 109,137 - MPMX19_06342 0.57 -0.1 109,137 - MPMX19_06342 0.57 +0.9 109,137 - MPMX19_06342 0.57 -0.6 109,137 - MPMX19_06342 0.57 +1.1 109,137 - MPMX19_06342 0.57 -1.5 109,186 + MPMX19_06342 0.76 -0.2 109,186 + MPMX19_06342 0.76 -0.4 109,186 + MPMX19_06342 0.76 +0.2 109,186 + MPMX19_06342 0.76 -0.3 109,186 + MPMX19_06342 0.76 -2.1 109,186 + MPMX19_06342 0.76 +0.6 109,186 + MPMX19_06342 0.76 -1.4 109,186 + MPMX19_06342 0.76 -0.1 109,186 + MPMX19_06342 0.76 +2.7 109,186 + MPMX19_06342 0.76 -0.4 109,186 + MPMX19_06342 0.76 -1.6 109,186 + MPMX19_06342 0.76 +1.5 109,186 + MPMX19_06342 0.76 +0.5 109,186 + MPMX19_06342 0.76 -0.3 109,186 + MPMX19_06342 0.76 +0.2 109,186 + MPMX19_06342 0.76 +0.9 109,186 + MPMX19_06342 0.76 +0.3 109,186 + MPMX19_06342 0.76 -2.2 109,186 + MPMX19_06342 0.76 +0.0 109,187 - MPMX19_06342 0.76 -1.4 109,187 - MPMX19_06342 0.76 -2.1 109,187 - MPMX19_06342 0.76 +0.8 109,187 - MPMX19_06342 0.76 -0.2 109,187 - MPMX19_06342 0.76 -0.1 109,187 - MPMX19_06342 0.76 -0.6 109,187 - MPMX19_06342 0.76 +0.9 109,187 - MPMX19_06342 0.76 -0.7 109,187 - MPMX19_06342 0.76 -1.3 109,188 + MPMX19_06342 0.76 -0.8 109,188 + MPMX19_06342 0.76 -0.3 109,188 + MPMX19_06342 0.76 +0.3 109,188 + MPMX19_06342 0.76 -0.8 109,189 - MPMX19_06342 0.77 -0.4 109,189 - MPMX19_06342 0.77 +0.6 109,189 - MPMX19_06342 0.77 -0.7 109,189 - MPMX19_06342 0.77 +0.6 109,189 - MPMX19_06342 0.77 +0.0 109,249 + -1.3 109,250 - +1.7 109,342 + +0.5 109,342 + +0.6 109,342 + -0.8 109,342 + -0.0 109,342 + -1.4 109,342 + +0.1 109,342 + -0.9 109,343 - -0.7 109,343 - -0.8 109,343 - +0.2 109,343 - -0.1 109,343 - -1.4 109,343 - +0.9 109,718 + MPMX19_06343 0.31 -1.4 109,718 + MPMX19_06343 0.31 -1.5 109,718 + MPMX19_06343 0.31 -0.0 109,718 + MPMX19_06343 0.31 -0.2 109,719 - MPMX19_06343 0.31 -0.7 109,719 - MPMX19_06343 0.31 +0.3 109,719 - MPMX19_06343 0.31 -2.3 109,719 - MPMX19_06343 0.31 -0.3 109,719 - MPMX19_06343 0.31 +1.1 109,719 - MPMX19_06343 0.31 +0.4 109,784 + MPMX19_06343 0.37 -0.6 109,784 + MPMX19_06343 0.37 +0.1 109,784 + MPMX19_06343 0.37 -1.3 109,785 - MPMX19_06343 0.37 +0.2 109,785 - MPMX19_06343 0.37 +0.1 109,785 - MPMX19_06343 0.37 +0.2 109,785 - MPMX19_06343 0.37 +0.8 109,785 - MPMX19_06343 0.37 +0.8 109,785 - MPMX19_06343 0.37 -0.3 109,785 - MPMX19_06343 0.37 -0.2 109,785 - MPMX19_06343 0.37 +1.0 110,006 - MPMX19_06343 0.56 -0.1 110,183 + MPMX19_06343 0.70 -0.9 110,183 + MPMX19_06343 0.70 -1.4 110,183 + MPMX19_06343 0.70 -0.9 110,183 + MPMX19_06343 0.70 -0.9 110,183 + MPMX19_06343 0.70 +0.9 110,183 + MPMX19_06343 0.70 +0.3 110,183 + MPMX19_06343 0.70 -0.4 110,183 + MPMX19_06343 0.70 -1.0 110,183 + MPMX19_06343 0.70 -0.4 110,183 + MPMX19_06343 0.70 +0.3 110,183 + MPMX19_06343 0.70 -0.8 110,183 + MPMX19_06343 0.70 -0.8 110,184 - MPMX19_06343 0.71 -0.1 110,184 - MPMX19_06343 0.71 -1.7 110,184 - MPMX19_06343 0.71 -0.4 110,184 - MPMX19_06343 0.71 +0.6 110,184 - MPMX19_06343 0.71 -1.1 110,184 - MPMX19_06343 0.71 +0.2 110,184 - MPMX19_06343 0.71 -1.9 110,184 - MPMX19_06343 0.71 +0.8 110,188 + MPMX19_06343 0.71 +1.3 110,188 + MPMX19_06343 0.71 +0.2 110,189 - MPMX19_06343 0.71 -1.7 110,573 + +0.2 110,573 + +0.3 110,573 + -0.2 110,573 + -0.3 110,573 + +0.1 110,573 + -1.1 110,573 + -1.9 110,574 - +0.6 110,574 - -1.0 110,574 - -0.9 110,574 - -1.4 110,574 - -0.2 110,574 - -0.2 110,574 - -0.1 110,574 - +0.9 110,574 - -1.6 110,937 + -1.0 111,061 + -0.5 111,110 + +0.1 111,110 + -1.0 111,111 - -1.7 111,330 + MPMX19_06345 0.42 -0.3 111,331 - MPMX19_06345 0.42 -0.2 111,367 + MPMX19_06345 0.49 -0.9 111,367 + MPMX19_06345 0.49 +0.3 111,367 + MPMX19_06345 0.49 +0.0 111,368 - MPMX19_06345 0.49 -0.6 111,368 - MPMX19_06345 0.49 -1.1 111,368 - MPMX19_06345 0.49 -1.0 111,368 - MPMX19_06345 0.49 +0.3 111,368 - MPMX19_06345 0.49 +0.4 111,368 - MPMX19_06345 0.49 -0.2 111,377 + MPMX19_06345 0.51 +0.3 111,377 + MPMX19_06345 0.51 +0.2 111,377 + MPMX19_06345 0.51 +0.3 111,377 + MPMX19_06345 0.51 +1.0 111,378 - MPMX19_06345 0.51 +0.3 111,378 - MPMX19_06345 0.51 -0.4
Or see this region's nucleotide sequence