Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_06281 and MPMX19_06282 are separated by 946 nucleotides MPMX19_06282 and MPMX19_06283 are separated by 457 nucleotides
MPMX19_06281: MPMX19_06281 - hypothetical protein, at 29,404 to 29,859
_06281
MPMX19_06282: MPMX19_06282 - ATP-dependent RecD-like DNA helicase, at 30,806 to 33,031
_06282
MPMX19_06283: MPMX19_06283 - ISL3 family transposase ISAzba9, at 33,489 to 35,147
_06283
Position (kb)
30
31
32
33
34 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 29.890 kb on + strand at 29.890 kb on + strand at 29.891 kb on - strand at 29.891 kb on - strand at 30.000 kb on + strand at 30.000 kb on + strand at 30.000 kb on + strand at 30.000 kb on + strand at 30.213 kb on + strand at 30.213 kb on + strand at 30.214 kb on - strand at 30.214 kb on - strand at 30.244 kb on + strand at 30.244 kb on + strand at 30.285 kb on + strand at 30.285 kb on + strand at 30.285 kb on + strand at 30.286 kb on - strand at 30.286 kb on - strand at 30.286 kb on - strand at 30.286 kb on - strand at 30.292 kb on + strand at 30.292 kb on + strand at 30.292 kb on + strand at 30.293 kb on - strand at 30.293 kb on - strand at 30.305 kb on + strand at 30.305 kb on + strand at 30.306 kb on - strand at 30.307 kb on + strand at 30.307 kb on + strand at 30.307 kb on + strand at 30.307 kb on + strand at 30.307 kb on + strand at 30.307 kb on + strand at 30.308 kb on - strand at 30.308 kb on - strand at 30.308 kb on - strand at 30.308 kb on - strand at 30.308 kb on - strand at 30.313 kb on + strand at 30.314 kb on - strand at 30.339 kb on - strand at 30.339 kb on - strand at 30.433 kb on - strand at 30.538 kb on + strand at 30.538 kb on + strand at 30.539 kb on - strand at 30.616 kb on + strand at 30.617 kb on - strand at 30.617 kb on - strand at 30.617 kb on - strand at 30.617 kb on - strand at 30.688 kb on + strand at 30.688 kb on + strand at 30.688 kb on + strand at 30.688 kb on + strand at 30.688 kb on + strand at 30.688 kb on + strand at 30.689 kb on - strand at 30.689 kb on - strand at 30.689 kb on - strand at 30.689 kb on - strand at 30.690 kb on + strand at 30.690 kb on + strand at 30.690 kb on + strand at 30.690 kb on + strand at 30.690 kb on + strand at 30.690 kb on + strand at 30.691 kb on - strand at 30.691 kb on - strand at 30.691 kb on - strand at 30.691 kb on - strand at 30.691 kb on - strand at 30.691 kb on - strand at 30.691 kb on - strand at 30.723 kb on - strand at 30.723 kb on - strand at 30.723 kb on - strand at 31.124 kb on + strand, within MPMX19_06282 at 31.124 kb on + strand, within MPMX19_06282 at 31.124 kb on + strand, within MPMX19_06282 at 31.124 kb on + strand, within MPMX19_06282 at 31.124 kb on + strand, within MPMX19_06282 at 31.124 kb on + strand, within MPMX19_06282 at 31.125 kb on - strand, within MPMX19_06282 at 31.125 kb on - strand, within MPMX19_06282 at 31.163 kb on + strand, within MPMX19_06282 at 31.163 kb on + strand, within MPMX19_06282 at 31.367 kb on + strand, within MPMX19_06282 at 31.367 kb on + strand, within MPMX19_06282 at 31.367 kb on + strand, within MPMX19_06282 at 31.367 kb on + strand, within MPMX19_06282 at 31.368 kb on - strand, within MPMX19_06282 at 31.368 kb on - strand, within MPMX19_06282 at 31.368 kb on - strand, within MPMX19_06282 at 31.368 kb on - strand, within MPMX19_06282 at 31.376 kb on + strand, within MPMX19_06282 at 31.377 kb on - strand, within MPMX19_06282 at 31.377 kb on - strand, within MPMX19_06282 at 31.526 kb on + strand, within MPMX19_06282 at 31.526 kb on + strand, within MPMX19_06282 at 31.716 kb on - strand, within MPMX19_06282 at 31.716 kb on - strand, within MPMX19_06282 at 31.921 kb on + strand, within MPMX19_06282 at 31.921 kb on + strand, within MPMX19_06282 at 31.921 kb on + strand, within MPMX19_06282 at 31.921 kb on + strand, within MPMX19_06282 at 31.921 kb on + strand, within MPMX19_06282 at 31.921 kb on + strand, within MPMX19_06282 at 31.921 kb on + strand, within MPMX19_06282 at 31.922 kb on - strand, within MPMX19_06282 at 31.922 kb on - strand, within MPMX19_06282 at 31.922 kb on - strand, within MPMX19_06282 at 31.922 kb on - strand, within MPMX19_06282 at 31.922 kb on - strand, within MPMX19_06282 at 31.922 kb on - strand, within MPMX19_06282 at 31.922 kb on - strand, within MPMX19_06282 at 31.922 kb on - strand, within MPMX19_06282 at 31.922 kb on - strand, within MPMX19_06282 at 31.922 kb on - strand, within MPMX19_06282 at 31.922 kb on - strand, within MPMX19_06282 at 31.922 kb on - strand, within MPMX19_06282 at 32.205 kb on + strand, within MPMX19_06282 at 32.205 kb on + strand, within MPMX19_06282 at 32.205 kb on + strand, within MPMX19_06282 at 32.206 kb on - strand, within MPMX19_06282 at 32.206 kb on - strand, within MPMX19_06282 at 32.206 kb on - strand, within MPMX19_06282 at 32.289 kb on + strand, within MPMX19_06282 at 32.290 kb on - strand, within MPMX19_06282 at 32.385 kb on + strand, within MPMX19_06282 at 32.385 kb on + strand, within MPMX19_06282 at 32.386 kb on - strand, within MPMX19_06282 at 32.386 kb on - strand, within MPMX19_06282 at 32.386 kb on - strand, within MPMX19_06282 at 32.386 kb on - strand, within MPMX19_06282 at 32.402 kb on + strand, within MPMX19_06282 at 32.402 kb on + strand, within MPMX19_06282 at 32.403 kb on - strand, within MPMX19_06282 at 32.403 kb on - strand, within MPMX19_06282 at 32.497 kb on - strand, within MPMX19_06282 at 32.621 kb on + strand, within MPMX19_06282 at 32.621 kb on + strand, within MPMX19_06282 at 32.621 kb on + strand, within MPMX19_06282 at 32.621 kb on + strand, within MPMX19_06282 at 32.621 kb on + strand, within MPMX19_06282 at 32.621 kb on + strand, within MPMX19_06282 at 32.621 kb on + strand, within MPMX19_06282 at 32.621 kb on + strand, within MPMX19_06282 at 32.621 kb on + strand, within MPMX19_06282 at 32.621 kb on + strand, within MPMX19_06282 at 32.622 kb on + strand, within MPMX19_06282 at 32.622 kb on - strand, within MPMX19_06282 at 32.622 kb on - strand, within MPMX19_06282 at 32.622 kb on - strand, within MPMX19_06282 at 32.622 kb on - strand, within MPMX19_06282 at 32.622 kb on - strand, within MPMX19_06282 at 32.622 kb on - strand, within MPMX19_06282 at 32.675 kb on + strand, within MPMX19_06282 at 32.675 kb on + strand, within MPMX19_06282 at 32.675 kb on + strand, within MPMX19_06282 at 32.675 kb on + strand, within MPMX19_06282 at 32.675 kb on + strand, within MPMX19_06282 at 32.675 kb on + strand, within MPMX19_06282 at 32.675 kb on + strand, within MPMX19_06282 at 32.676 kb on - strand, within MPMX19_06282 at 32.676 kb on - strand, within MPMX19_06282 at 32.676 kb on - strand, within MPMX19_06282 at 32.676 kb on - strand, within MPMX19_06282 at 32.760 kb on - strand, within MPMX19_06282 at 32.795 kb on + strand, within MPMX19_06282 at 32.795 kb on + strand, within MPMX19_06282 at 32.795 kb on + strand, within MPMX19_06282 at 32.796 kb on - strand, within MPMX19_06282 at 32.831 kb on + strand at 32.832 kb on - strand at 32.832 kb on - strand at 32.894 kb on + strand at 32.895 kb on - strand at 32.896 kb on + strand at 32.896 kb on + strand at 33.134 kb on - strand at 33.198 kb on - strand at 33.295 kb on + strand at 33.295 kb on + strand at 33.295 kb on + strand at 33.295 kb on + strand at 33.295 kb on + strand at 33.295 kb on + strand at 33.296 kb on - strand at 33.296 kb on - strand at 33.296 kb on - strand at 33.296 kb on - strand at 33.296 kb on - strand at 33.296 kb on - strand at 33.296 kb on - strand at 33.296 kb on - strand at 33.332 kb on + strand at 33.332 kb on + strand at 33.332 kb on + strand at 33.333 kb on - strand at 33.333 kb on - strand at 33.333 kb on - strand at 33.333 kb on - strand at 33.333 kb on - strand at 33.333 kb on - strand at 33.333 kb on - strand at 33.349 kb on - strand at 33.404 kb on + strand at 33.404 kb on + strand at 33.404 kb on + strand at 33.404 kb on + strand at 33.404 kb on + strand at 33.404 kb on + strand at 33.405 kb on - strand at 33.405 kb on - strand at 33.405 kb on - strand at 33.405 kb on - strand at 33.405 kb on - strand at 33.405 kb on - strand at 33.427 kb on + strand at 33.427 kb on + strand at 33.427 kb on + strand at 33.427 kb on + strand at 33.428 kb on - strand at 33.428 kb on - strand at 33.428 kb on - strand at 33.428 kb on - strand at 33.474 kb on + strand at 33.474 kb on + strand at 33.474 kb on + strand at 33.475 kb on - strand at 33.541 kb on + strand at 33.541 kb on + strand at 33.541 kb on + strand at 33.541 kb on + strand at 33.541 kb on + strand at 33.542 kb on - strand at 33.542 kb on - strand at 33.542 kb on - strand at 33.542 kb on - strand at 33.542 kb on - strand at 33.976 kb on + strand, within MPMX19_06283 at 33.976 kb on + strand, within MPMX19_06283 at 33.976 kb on + strand, within MPMX19_06283 at 33.976 kb on + strand, within MPMX19_06283 at 33.976 kb on + strand, within MPMX19_06283 at 33.977 kb on - strand, within MPMX19_06283 at 33.977 kb on - strand, within MPMX19_06283 at 33.977 kb on - strand, within MPMX19_06283 at 33.977 kb on - strand, within MPMX19_06283 at 33.977 kb on - strand, within MPMX19_06283 at 33.977 kb on - strand, within MPMX19_06283 at 33.977 kb on - strand, within MPMX19_06283 at 33.978 kb on - strand, within MPMX19_06283
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 29,890 + -0.3 29,890 + -1.0 29,891 - -0.7 29,891 - -0.6 30,000 + -1.1 30,000 + +1.2 30,000 + -0.8 30,000 + +0.1 30,213 + +0.9 30,213 + -0.2 30,214 - +0.0 30,214 - -1.3 30,244 + -0.0 30,244 + -1.6 30,285 + -0.4 30,285 + -1.3 30,285 + -0.6 30,286 - -1.1 30,286 - -0.1 30,286 - +0.1 30,286 - -0.6 30,292 + -0.1 30,292 + +1.2 30,292 + +0.2 30,293 - -1.0 30,293 - +1.7 30,305 + -0.3 30,305 + -1.4 30,306 - -1.1 30,307 + -0.0 30,307 + -0.1 30,307 + +0.0 30,307 + +1.2 30,307 + -1.3 30,307 + -1.7 30,308 - +0.2 30,308 - +0.1 30,308 - -0.2 30,308 - +1.4 30,308 - -0.7 30,313 + +1.9 30,314 - -0.5 30,339 - +0.0 30,339 - +0.2 30,433 - -0.5 30,538 + -0.9 30,538 + -1.7 30,539 - +0.8 30,616 + +0.1 30,617 - -2.6 30,617 - +0.2 30,617 - -1.1 30,617 - -1.0 30,688 + +0.0 30,688 + -0.8 30,688 + +0.1 30,688 + -0.2 30,688 + +0.8 30,688 + -2.4 30,689 - -0.8 30,689 - -0.9 30,689 - +0.0 30,689 - -0.7 30,690 + -0.3 30,690 + +0.3 30,690 + +0.7 30,690 + -0.8 30,690 + -0.2 30,690 + +0.8 30,691 - -0.7 30,691 - +0.5 30,691 - +1.9 30,691 - -2.4 30,691 - +0.9 30,691 - -0.9 30,691 - -0.8 30,723 - -1.4 30,723 - -0.6 30,723 - +0.3 31,124 + MPMX19_06282 0.14 -0.9 31,124 + MPMX19_06282 0.14 +0.1 31,124 + MPMX19_06282 0.14 -0.1 31,124 + MPMX19_06282 0.14 +0.4 31,124 + MPMX19_06282 0.14 -1.4 31,124 + MPMX19_06282 0.14 -1.1 31,125 - MPMX19_06282 0.14 -0.4 31,125 - MPMX19_06282 0.14 -0.5 31,163 + MPMX19_06282 0.16 +1.1 31,163 + MPMX19_06282 0.16 +0.6 31,367 + MPMX19_06282 0.25 +0.4 31,367 + MPMX19_06282 0.25 +0.7 31,367 + MPMX19_06282 0.25 +1.7 31,367 + MPMX19_06282 0.25 -1.7 31,368 - MPMX19_06282 0.25 +0.3 31,368 - MPMX19_06282 0.25 +0.6 31,368 - MPMX19_06282 0.25 -0.3 31,368 - MPMX19_06282 0.25 -0.5 31,376 + MPMX19_06282 0.26 -0.9 31,377 - MPMX19_06282 0.26 -1.7 31,377 - MPMX19_06282 0.26 +0.5 31,526 + MPMX19_06282 0.32 -1.7 31,526 + MPMX19_06282 0.32 +0.1 31,716 - MPMX19_06282 0.41 +0.3 31,716 - MPMX19_06282 0.41 +0.9 31,921 + MPMX19_06282 0.50 +0.9 31,921 + MPMX19_06282 0.50 -1.1 31,921 + MPMX19_06282 0.50 +0.9 31,921 + MPMX19_06282 0.50 -0.9 31,921 + MPMX19_06282 0.50 -1.1 31,921 + MPMX19_06282 0.50 -0.1 31,921 + MPMX19_06282 0.50 +0.9 31,922 - MPMX19_06282 0.50 -0.4 31,922 - MPMX19_06282 0.50 -0.9 31,922 - MPMX19_06282 0.50 -0.4 31,922 - MPMX19_06282 0.50 -0.8 31,922 - MPMX19_06282 0.50 +0.8 31,922 - MPMX19_06282 0.50 +0.9 31,922 - MPMX19_06282 0.50 +0.1 31,922 - MPMX19_06282 0.50 +1.2 31,922 - MPMX19_06282 0.50 +0.4 31,922 - MPMX19_06282 0.50 -0.7 31,922 - MPMX19_06282 0.50 +1.2 31,922 - MPMX19_06282 0.50 -0.3 32,205 + MPMX19_06282 0.63 -1.3 32,205 + MPMX19_06282 0.63 +0.1 32,205 + MPMX19_06282 0.63 -0.2 32,206 - MPMX19_06282 0.63 -0.4 32,206 - MPMX19_06282 0.63 +0.3 32,206 - MPMX19_06282 0.63 -0.7 32,289 + MPMX19_06282 0.67 +0.4 32,290 - MPMX19_06282 0.67 -0.9 32,385 + MPMX19_06282 0.71 -2.6 32,385 + MPMX19_06282 0.71 +0.9 32,386 - MPMX19_06282 0.71 -2.0 32,386 - MPMX19_06282 0.71 -0.4 32,386 - MPMX19_06282 0.71 +0.6 32,386 - MPMX19_06282 0.71 -0.9 32,402 + MPMX19_06282 0.72 -1.7 32,402 + MPMX19_06282 0.72 +0.9 32,403 - MPMX19_06282 0.72 +0.5 32,403 - MPMX19_06282 0.72 -0.9 32,497 - MPMX19_06282 0.76 +0.2 32,621 + MPMX19_06282 0.82 +0.9 32,621 + MPMX19_06282 0.82 -0.6 32,621 + MPMX19_06282 0.82 -1.6 32,621 + MPMX19_06282 0.82 -1.9 32,621 + MPMX19_06282 0.82 -1.8 32,621 + MPMX19_06282 0.82 -0.6 32,621 + MPMX19_06282 0.82 +0.9 32,621 + MPMX19_06282 0.82 +1.3 32,621 + MPMX19_06282 0.82 -1.4 32,621 + MPMX19_06282 0.82 +0.5 32,622 + MPMX19_06282 0.82 +0.1 32,622 - MPMX19_06282 0.82 +0.1 32,622 - MPMX19_06282 0.82 +0.2 32,622 - MPMX19_06282 0.82 +2.6 32,622 - MPMX19_06282 0.82 +0.2 32,622 - MPMX19_06282 0.82 +1.5 32,622 - MPMX19_06282 0.82 +0.3 32,675 + MPMX19_06282 0.84 -0.3 32,675 + MPMX19_06282 0.84 +0.1 32,675 + MPMX19_06282 0.84 -1.9 32,675 + MPMX19_06282 0.84 +0.9 32,675 + MPMX19_06282 0.84 -1.1 32,675 + MPMX19_06282 0.84 +0.3 32,675 + MPMX19_06282 0.84 -1.3 32,676 - MPMX19_06282 0.84 -0.9 32,676 - MPMX19_06282 0.84 +0.9 32,676 - MPMX19_06282 0.84 -0.4 32,676 - MPMX19_06282 0.84 -0.9 32,760 - MPMX19_06282 0.88 -0.3 32,795 + MPMX19_06282 0.89 -0.9 32,795 + MPMX19_06282 0.89 -0.7 32,795 + MPMX19_06282 0.89 -1.1 32,796 - MPMX19_06282 0.89 -0.4 32,831 + -0.1 32,832 - -1.2 32,832 - -0.1 32,894 + -0.1 32,895 - +0.2 32,896 + -0.4 32,896 + -0.1 33,134 - +0.2 33,198 - -1.8 33,295 + -0.5 33,295 + -2.3 33,295 + +0.5 33,295 + -0.1 33,295 + +1.1 33,295 + -1.3 33,296 - +0.6 33,296 - -0.8 33,296 - -0.1 33,296 - +1.6 33,296 - -0.5 33,296 - -1.6 33,296 - +1.6 33,296 - -2.8 33,332 + +0.1 33,332 + -0.1 33,332 + +0.9 33,333 - +0.4 33,333 - -0.3 33,333 - -0.4 33,333 - -0.9 33,333 - -0.1 33,333 - -1.8 33,333 - -0.9 33,349 - +0.1 33,404 + -1.6 33,404 + -0.3 33,404 + -0.6 33,404 + +0.4 33,404 + -1.0 33,404 + -2.2 33,405 - -0.7 33,405 - +0.7 33,405 - -0.1 33,405 - +1.2 33,405 - +0.7 33,405 - +0.2 33,427 + +0.7 33,427 + -0.4 33,427 + -0.6 33,427 + +0.7 33,428 - +0.7 33,428 - -0.5 33,428 - +0.1 33,428 - +0.1 33,474 + -0.4 33,474 + -1.2 33,474 + -0.9 33,475 - -1.5 33,541 + -0.2 33,541 + -0.9 33,541 + +0.2 33,541 + -1.0 33,541 + +0.6 33,542 - -0.9 33,542 - -1.4 33,542 - -0.5 33,542 - +0.1 33,542 - +0.6 33,976 + MPMX19_06283 0.29 -1.2 33,976 + MPMX19_06283 0.29 -0.4 33,976 + MPMX19_06283 0.29 -0.3 33,976 + MPMX19_06283 0.29 +0.9 33,976 + MPMX19_06283 0.29 -0.6 33,977 - MPMX19_06283 0.29 -1.3 33,977 - MPMX19_06283 0.29 -0.3 33,977 - MPMX19_06283 0.29 -0.4 33,977 - MPMX19_06283 0.29 -0.3 33,977 - MPMX19_06283 0.29 -0.6 33,977 - MPMX19_06283 0.29 -1.1 33,977 - MPMX19_06283 0.29 -0.8 33,978 - MPMX19_06283 0.29 -1.9
Or see this region's nucleotide sequence