Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_05739 and MPMX19_05740 overlap by 4 nucleotides MPMX19_05740 and MPMX19_05741 overlap by 1 nucleotides
MPMX19_05739: MPMX19_05739 - Tuberculostearic acid methyltransferase UfaA1, at 455,224 to 456,486
_05739
MPMX19_05740: MPMX19_05740 - hypothetical protein, at 456,483 to 457,316
_05740
MPMX19_05741: MPMX19_05741 - hypothetical protein, at 457,316 to 458,698
_05741
Position (kb) 456
457
458 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 455.532 kb on - strand, within MPMX19_05739 at 455.532 kb on - strand, within MPMX19_05739 at 455.532 kb on - strand, within MPMX19_05739 at 455.618 kb on + strand, within MPMX19_05739 at 455.618 kb on + strand, within MPMX19_05739 at 455.619 kb on - strand, within MPMX19_05739 at 455.619 kb on - strand, within MPMX19_05739 at 455.955 kb on - strand, within MPMX19_05739 at 455.969 kb on + strand, within MPMX19_05739 at 455.969 kb on + strand, within MPMX19_05739 at 455.969 kb on + strand, within MPMX19_05739 at 455.969 kb on + strand, within MPMX19_05739 at 455.969 kb on + strand, within MPMX19_05739 at 455.969 kb on + strand, within MPMX19_05739 at 455.969 kb on + strand, within MPMX19_05739 at 455.969 kb on + strand, within MPMX19_05739 at 455.969 kb on + strand, within MPMX19_05739 at 455.969 kb on + strand, within MPMX19_05739 at 455.969 kb on + strand, within MPMX19_05739 at 455.969 kb on + strand, within MPMX19_05739 at 455.969 kb on + strand, within MPMX19_05739 at 455.969 kb on + strand, within MPMX19_05739 at 455.969 kb on + strand, within MPMX19_05739 at 455.969 kb on + strand, within MPMX19_05739 at 455.969 kb on + strand, within MPMX19_05739 at 455.970 kb on - strand, within MPMX19_05739 at 455.970 kb on - strand, within MPMX19_05739 at 455.970 kb on - strand, within MPMX19_05739 at 455.970 kb on - strand, within MPMX19_05739 at 455.970 kb on - strand, within MPMX19_05739 at 455.970 kb on - strand, within MPMX19_05739 at 455.970 kb on - strand, within MPMX19_05739 at 455.970 kb on - strand, within MPMX19_05739 at 455.970 kb on - strand, within MPMX19_05739 at 455.970 kb on - strand, within MPMX19_05739 at 455.970 kb on - strand, within MPMX19_05739 at 455.970 kb on - strand, within MPMX19_05739 at 455.970 kb on - strand, within MPMX19_05739 at 455.970 kb on - strand, within MPMX19_05739 at 455.970 kb on - strand, within MPMX19_05739 at 455.999 kb on + strand, within MPMX19_05739 at 455.999 kb on + strand, within MPMX19_05739 at 456.000 kb on - strand, within MPMX19_05739 at 456.020 kb on + strand, within MPMX19_05739 at 456.021 kb on - strand, within MPMX19_05739 at 456.021 kb on - strand, within MPMX19_05739 at 456.215 kb on + strand, within MPMX19_05739 at 456.215 kb on + strand, within MPMX19_05739 at 456.215 kb on + strand, within MPMX19_05739 at 456.215 kb on + strand, within MPMX19_05739 at 456.215 kb on + strand, within MPMX19_05739 at 456.216 kb on - strand, within MPMX19_05739 at 456.216 kb on - strand, within MPMX19_05739 at 456.216 kb on - strand, within MPMX19_05739 at 456.216 kb on - strand, within MPMX19_05739 at 456.802 kb on + strand, within MPMX19_05740 at 456.802 kb on + strand, within MPMX19_05740 at 456.802 kb on + strand, within MPMX19_05740 at 456.802 kb on + strand, within MPMX19_05740 at 456.803 kb on - strand, within MPMX19_05740 at 456.815 kb on + strand, within MPMX19_05740 at 456.816 kb on - strand, within MPMX19_05740 at 456.835 kb on + strand, within MPMX19_05740 at 456.835 kb on + strand, within MPMX19_05740 at 456.835 kb on + strand, within MPMX19_05740 at 456.835 kb on + strand, within MPMX19_05740 at 456.835 kb on + strand, within MPMX19_05740 at 456.835 kb on + strand, within MPMX19_05740 at 456.835 kb on + strand, within MPMX19_05740 at 456.835 kb on + strand, within MPMX19_05740 at 456.835 kb on + strand, within MPMX19_05740 at 456.835 kb on + strand, within MPMX19_05740 at 456.835 kb on + strand, within MPMX19_05740 at 456.835 kb on + strand, within MPMX19_05740 at 456.835 kb on + strand, within MPMX19_05740 at 456.835 kb on + strand, within MPMX19_05740 at 456.836 kb on - strand, within MPMX19_05740 at 456.836 kb on - strand, within MPMX19_05740 at 456.836 kb on - strand, within MPMX19_05740 at 456.836 kb on - strand, within MPMX19_05740 at 456.836 kb on - strand, within MPMX19_05740 at 456.836 kb on - strand, within MPMX19_05740 at 456.836 kb on - strand, within MPMX19_05740 at 456.836 kb on - strand, within MPMX19_05740 at 456.836 kb on - strand, within MPMX19_05740 at 456.836 kb on - strand, within MPMX19_05740 at 456.836 kb on - strand, within MPMX19_05740 at 456.836 kb on - strand, within MPMX19_05740 at 456.836 kb on - strand, within MPMX19_05740 at 456.836 kb on - strand, within MPMX19_05740 at 456.836 kb on - strand, within MPMX19_05740 at 456.836 kb on - strand, within MPMX19_05740 at 456.836 kb on - strand, within MPMX19_05740 at 456.836 kb on - strand, within MPMX19_05740 at 456.836 kb on - strand, within MPMX19_05740 at 456.836 kb on - strand, within MPMX19_05740 at 456.836 kb on - strand, within MPMX19_05740 at 456.836 kb on - strand, within MPMX19_05740 at 456.836 kb on - strand, within MPMX19_05740 at 456.836 kb on - strand, within MPMX19_05740 at 456.836 kb on - strand, within MPMX19_05740 at 456.898 kb on + strand, within MPMX19_05740 at 456.899 kb on - strand, within MPMX19_05740 at 456.899 kb on - strand, within MPMX19_05740 at 456.899 kb on - strand, within MPMX19_05740 at 457.088 kb on + strand, within MPMX19_05740 at 457.088 kb on + strand, within MPMX19_05740 at 457.088 kb on + strand, within MPMX19_05740 at 457.088 kb on + strand, within MPMX19_05740 at 457.089 kb on - strand, within MPMX19_05740 at 457.089 kb on - strand, within MPMX19_05740 at 457.089 kb on - strand, within MPMX19_05740 at 457.089 kb on - strand, within MPMX19_05740 at 457.231 kb on + strand, within MPMX19_05740 at 457.285 kb on + strand at 457.285 kb on + strand at 457.285 kb on + strand at 457.285 kb on + strand at 457.285 kb on + strand at 457.285 kb on + strand at 457.285 kb on + strand at 457.285 kb on + strand at 457.285 kb on + strand at 457.285 kb on + strand at 457.285 kb on + strand at 457.286 kb on - strand at 457.286 kb on - strand at 457.286 kb on - strand at 457.286 kb on - strand at 457.286 kb on - strand at 457.286 kb on - strand at 457.286 kb on - strand at 457.286 kb on - strand at 457.476 kb on + strand, within MPMX19_05741 at 457.476 kb on + strand, within MPMX19_05741 at 457.476 kb on + strand, within MPMX19_05741 at 457.476 kb on + strand, within MPMX19_05741 at 457.477 kb on - strand, within MPMX19_05741 at 457.477 kb on - strand, within MPMX19_05741 at 457.477 kb on - strand, within MPMX19_05741 at 457.569 kb on + strand, within MPMX19_05741 at 457.570 kb on - strand, within MPMX19_05741 at 457.677 kb on + strand, within MPMX19_05741 at 457.677 kb on + strand, within MPMX19_05741 at 457.677 kb on + strand, within MPMX19_05741 at 457.677 kb on + strand, within MPMX19_05741 at 457.677 kb on + strand, within MPMX19_05741 at 457.678 kb on - strand, within MPMX19_05741 at 457.678 kb on - strand, within MPMX19_05741 at 457.678 kb on - strand, within MPMX19_05741 at 457.678 kb on - strand, within MPMX19_05741 at 457.725 kb on + strand, within MPMX19_05741 at 457.725 kb on + strand, within MPMX19_05741 at 457.725 kb on + strand, within MPMX19_05741 at 457.725 kb on + strand, within MPMX19_05741 at 457.725 kb on + strand, within MPMX19_05741 at 457.725 kb on + strand, within MPMX19_05741 at 457.726 kb on - strand, within MPMX19_05741 at 457.726 kb on - strand, within MPMX19_05741 at 457.726 kb on - strand, within MPMX19_05741 at 457.804 kb on - strand, within MPMX19_05741 at 458.019 kb on + strand, within MPMX19_05741 at 458.019 kb on + strand, within MPMX19_05741 at 458.019 kb on + strand, within MPMX19_05741 at 458.019 kb on + strand, within MPMX19_05741 at 458.019 kb on + strand, within MPMX19_05741 at 458.019 kb on + strand, within MPMX19_05741 at 458.019 kb on + strand, within MPMX19_05741 at 458.019 kb on + strand, within MPMX19_05741 at 458.019 kb on + strand, within MPMX19_05741 at 458.019 kb on + strand, within MPMX19_05741 at 458.019 kb on + strand, within MPMX19_05741 at 458.019 kb on + strand, within MPMX19_05741 at 458.019 kb on + strand, within MPMX19_05741 at 458.019 kb on + strand, within MPMX19_05741 at 458.019 kb on + strand, within MPMX19_05741 at 458.019 kb on + strand, within MPMX19_05741 at 458.019 kb on + strand, within MPMX19_05741 at 458.019 kb on + strand, within MPMX19_05741 at 458.019 kb on + strand, within MPMX19_05741 at 458.019 kb on + strand, within MPMX19_05741 at 458.019 kb on + strand, within MPMX19_05741 at 458.019 kb on + strand, within MPMX19_05741 at 458.019 kb on + strand, within MPMX19_05741 at 458.019 kb on + strand, within MPMX19_05741 at 458.019 kb on + strand, within MPMX19_05741 at 458.019 kb on + strand, within MPMX19_05741 at 458.019 kb on + strand, within MPMX19_05741 at 458.019 kb on + strand, within MPMX19_05741 at 458.019 kb on + strand, within MPMX19_05741 at 458.019 kb on + strand, within MPMX19_05741 at 458.019 kb on + strand, within MPMX19_05741 at 458.019 kb on + strand, within MPMX19_05741 at 458.020 kb on - strand, within MPMX19_05741 at 458.020 kb on - strand, within MPMX19_05741 at 458.020 kb on - strand, within MPMX19_05741 at 458.020 kb on - strand, within MPMX19_05741 at 458.020 kb on - strand, within MPMX19_05741 at 458.020 kb on - strand, within MPMX19_05741 at 458.020 kb on - strand, within MPMX19_05741 at 458.020 kb on - strand, within MPMX19_05741 at 458.020 kb on - strand, within MPMX19_05741 at 458.020 kb on - strand, within MPMX19_05741 at 458.020 kb on - strand, within MPMX19_05741 at 458.020 kb on - strand, within MPMX19_05741 at 458.020 kb on - strand, within MPMX19_05741 at 458.020 kb on - strand, within MPMX19_05741 at 458.020 kb on - strand, within MPMX19_05741 at 458.020 kb on - strand, within MPMX19_05741 at 458.020 kb on - strand, within MPMX19_05741 at 458.020 kb on - strand, within MPMX19_05741 at 458.289 kb on + strand, within MPMX19_05741 at 458.289 kb on + strand, within MPMX19_05741 at 458.289 kb on + strand, within MPMX19_05741 at 458.289 kb on + strand, within MPMX19_05741 at 458.290 kb on - strand, within MPMX19_05741 at 458.290 kb on - strand, within MPMX19_05741 at 458.290 kb on - strand, within MPMX19_05741
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 455,532 - MPMX19_05739 0.24 -0.9 455,532 - MPMX19_05739 0.24 -0.0 455,532 - MPMX19_05739 0.24 +0.1 455,618 + MPMX19_05739 0.31 -2.1 455,618 + MPMX19_05739 0.31 -1.1 455,619 - MPMX19_05739 0.31 +0.8 455,619 - MPMX19_05739 0.31 +0.3 455,955 - MPMX19_05739 0.58 +1.0 455,969 + MPMX19_05739 0.59 +0.4 455,969 + MPMX19_05739 0.59 -0.2 455,969 + MPMX19_05739 0.59 -1.5 455,969 + MPMX19_05739 0.59 -0.4 455,969 + MPMX19_05739 0.59 +1.1 455,969 + MPMX19_05739 0.59 +0.3 455,969 + MPMX19_05739 0.59 -0.5 455,969 + MPMX19_05739 0.59 +0.3 455,969 + MPMX19_05739 0.59 -0.2 455,969 + MPMX19_05739 0.59 +0.3 455,969 + MPMX19_05739 0.59 -0.1 455,969 + MPMX19_05739 0.59 -0.9 455,969 + MPMX19_05739 0.59 -0.8 455,969 + MPMX19_05739 0.59 -0.3 455,969 + MPMX19_05739 0.59 -1.3 455,969 + MPMX19_05739 0.59 -0.9 455,969 + MPMX19_05739 0.59 -0.2 455,970 - MPMX19_05739 0.59 -1.3 455,970 - MPMX19_05739 0.59 +1.2 455,970 - MPMX19_05739 0.59 -0.9 455,970 - MPMX19_05739 0.59 +0.8 455,970 - MPMX19_05739 0.59 +2.0 455,970 - MPMX19_05739 0.59 -0.0 455,970 - MPMX19_05739 0.59 -1.6 455,970 - MPMX19_05739 0.59 -0.1 455,970 - MPMX19_05739 0.59 -0.1 455,970 - MPMX19_05739 0.59 -0.3 455,970 - MPMX19_05739 0.59 +0.2 455,970 - MPMX19_05739 0.59 +0.1 455,970 - MPMX19_05739 0.59 -2.3 455,970 - MPMX19_05739 0.59 -2.6 455,970 - MPMX19_05739 0.59 -0.6 455,999 + MPMX19_05739 0.61 +1.3 455,999 + MPMX19_05739 0.61 -2.2 456,000 - MPMX19_05739 0.61 -0.3 456,020 + MPMX19_05739 0.63 +1.2 456,021 - MPMX19_05739 0.63 -1.0 456,021 - MPMX19_05739 0.63 +0.2 456,215 + MPMX19_05739 0.78 -1.0 456,215 + MPMX19_05739 0.78 -0.4 456,215 + MPMX19_05739 0.78 -1.2 456,215 + MPMX19_05739 0.78 -0.3 456,215 + MPMX19_05739 0.78 -0.8 456,216 - MPMX19_05739 0.79 +0.6 456,216 - MPMX19_05739 0.79 +0.6 456,216 - MPMX19_05739 0.79 -0.7 456,216 - MPMX19_05739 0.79 +0.3 456,802 + MPMX19_05740 0.38 -0.6 456,802 + MPMX19_05740 0.38 -1.1 456,802 + MPMX19_05740 0.38 +0.1 456,802 + MPMX19_05740 0.38 +0.4 456,803 - MPMX19_05740 0.38 -0.3 456,815 + MPMX19_05740 0.40 -0.0 456,816 - MPMX19_05740 0.40 +0.7 456,835 + MPMX19_05740 0.42 -0.5 456,835 + MPMX19_05740 0.42 -0.2 456,835 + MPMX19_05740 0.42 -0.3 456,835 + MPMX19_05740 0.42 -0.6 456,835 + MPMX19_05740 0.42 -0.1 456,835 + MPMX19_05740 0.42 -2.7 456,835 + MPMX19_05740 0.42 +0.1 456,835 + MPMX19_05740 0.42 -0.7 456,835 + MPMX19_05740 0.42 -0.8 456,835 + MPMX19_05740 0.42 +0.9 456,835 + MPMX19_05740 0.42 -1.9 456,835 + MPMX19_05740 0.42 -0.6 456,835 + MPMX19_05740 0.42 +0.0 456,835 + MPMX19_05740 0.42 -1.2 456,836 - MPMX19_05740 0.42 -0.0 456,836 - MPMX19_05740 0.42 -0.5 456,836 - MPMX19_05740 0.42 +0.1 456,836 - MPMX19_05740 0.42 -0.8 456,836 - MPMX19_05740 0.42 +0.0 456,836 - MPMX19_05740 0.42 -0.4 456,836 - MPMX19_05740 0.42 -0.5 456,836 - MPMX19_05740 0.42 +0.8 456,836 - MPMX19_05740 0.42 -1.1 456,836 - MPMX19_05740 0.42 -0.2 456,836 - MPMX19_05740 0.42 +2.7 456,836 - MPMX19_05740 0.42 +0.1 456,836 - MPMX19_05740 0.42 +0.4 456,836 - MPMX19_05740 0.42 -0.4 456,836 - MPMX19_05740 0.42 -1.0 456,836 - MPMX19_05740 0.42 -0.7 456,836 - MPMX19_05740 0.42 -2.0 456,836 - MPMX19_05740 0.42 +0.3 456,836 - MPMX19_05740 0.42 -0.9 456,836 - MPMX19_05740 0.42 -0.8 456,836 - MPMX19_05740 0.42 +0.5 456,836 - MPMX19_05740 0.42 -0.5 456,836 - MPMX19_05740 0.42 -1.5 456,836 - MPMX19_05740 0.42 -1.1 456,836 - MPMX19_05740 0.42 -0.6 456,898 + MPMX19_05740 0.50 +0.3 456,899 - MPMX19_05740 0.50 -1.3 456,899 - MPMX19_05740 0.50 -0.1 456,899 - MPMX19_05740 0.50 -1.5 457,088 + MPMX19_05740 0.73 +0.0 457,088 + MPMX19_05740 0.73 -0.2 457,088 + MPMX19_05740 0.73 -3.1 457,088 + MPMX19_05740 0.73 -1.2 457,089 - MPMX19_05740 0.73 +0.7 457,089 - MPMX19_05740 0.73 -1.3 457,089 - MPMX19_05740 0.73 -0.1 457,089 - MPMX19_05740 0.73 -0.2 457,231 + MPMX19_05740 0.90 +2.7 457,285 + -1.5 457,285 + -0.9 457,285 + +0.5 457,285 + -0.2 457,285 + -1.0 457,285 + -0.6 457,285 + -1.2 457,285 + +0.5 457,285 + +0.7 457,285 + -1.9 457,285 + -0.8 457,286 - -1.5 457,286 - +0.4 457,286 - -2.0 457,286 - -1.0 457,286 - -0.4 457,286 - -1.4 457,286 - -0.9 457,286 - +0.7 457,476 + MPMX19_05741 0.12 +1.4 457,476 + MPMX19_05741 0.12 -0.1 457,476 + MPMX19_05741 0.12 -2.0 457,476 + MPMX19_05741 0.12 -0.9 457,477 - MPMX19_05741 0.12 +0.8 457,477 - MPMX19_05741 0.12 -0.2 457,477 - MPMX19_05741 0.12 -2.7 457,569 + MPMX19_05741 0.18 -0.4 457,570 - MPMX19_05741 0.18 +0.7 457,677 + MPMX19_05741 0.26 +0.7 457,677 + MPMX19_05741 0.26 -1.3 457,677 + MPMX19_05741 0.26 -1.9 457,677 + MPMX19_05741 0.26 -0.9 457,677 + MPMX19_05741 0.26 -0.8 457,678 - MPMX19_05741 0.26 -0.7 457,678 - MPMX19_05741 0.26 -0.9 457,678 - MPMX19_05741 0.26 -0.0 457,678 - MPMX19_05741 0.26 -0.4 457,725 + MPMX19_05741 0.30 +0.3 457,725 + MPMX19_05741 0.30 -0.1 457,725 + MPMX19_05741 0.30 +0.3 457,725 + MPMX19_05741 0.30 -1.9 457,725 + MPMX19_05741 0.30 -0.2 457,725 + MPMX19_05741 0.30 -0.7 457,726 - MPMX19_05741 0.30 -0.8 457,726 - MPMX19_05741 0.30 -1.2 457,726 - MPMX19_05741 0.30 -0.2 457,804 - MPMX19_05741 0.35 -1.0 458,019 + MPMX19_05741 0.51 +0.2 458,019 + MPMX19_05741 0.51 -0.4 458,019 + MPMX19_05741 0.51 -0.2 458,019 + MPMX19_05741 0.51 -1.4 458,019 + MPMX19_05741 0.51 -0.6 458,019 + MPMX19_05741 0.51 -0.5 458,019 + MPMX19_05741 0.51 -1.6 458,019 + MPMX19_05741 0.51 -1.5 458,019 + MPMX19_05741 0.51 +1.0 458,019 + MPMX19_05741 0.51 -0.3 458,019 + MPMX19_05741 0.51 -0.0 458,019 + MPMX19_05741 0.51 +2.0 458,019 + MPMX19_05741 0.51 +0.7 458,019 + MPMX19_05741 0.51 -0.4 458,019 + MPMX19_05741 0.51 -0.1 458,019 + MPMX19_05741 0.51 +0.0 458,019 + MPMX19_05741 0.51 +2.0 458,019 + MPMX19_05741 0.51 -0.3 458,019 + MPMX19_05741 0.51 -0.0 458,019 + MPMX19_05741 0.51 -0.7 458,019 + MPMX19_05741 0.51 -0.7 458,019 + MPMX19_05741 0.51 -0.6 458,019 + MPMX19_05741 0.51 +1.3 458,019 + MPMX19_05741 0.51 +0.7 458,019 + MPMX19_05741 0.51 -0.9 458,019 + MPMX19_05741 0.51 -0.8 458,019 + MPMX19_05741 0.51 -1.2 458,019 + MPMX19_05741 0.51 -0.5 458,019 + MPMX19_05741 0.51 -0.8 458,019 + MPMX19_05741 0.51 -1.2 458,019 + MPMX19_05741 0.51 -2.5 458,019 + MPMX19_05741 0.51 -0.3 458,020 - MPMX19_05741 0.51 -1.2 458,020 - MPMX19_05741 0.51 -0.3 458,020 - MPMX19_05741 0.51 +0.7 458,020 - MPMX19_05741 0.51 +0.2 458,020 - MPMX19_05741 0.51 +0.2 458,020 - MPMX19_05741 0.51 +0.5 458,020 - MPMX19_05741 0.51 -0.4 458,020 - MPMX19_05741 0.51 -0.0 458,020 - MPMX19_05741 0.51 +0.6 458,020 - MPMX19_05741 0.51 +0.1 458,020 - MPMX19_05741 0.51 +0.2 458,020 - MPMX19_05741 0.51 -1.1 458,020 - MPMX19_05741 0.51 +0.1 458,020 - MPMX19_05741 0.51 +0.5 458,020 - MPMX19_05741 0.51 -0.9 458,020 - MPMX19_05741 0.51 -0.6 458,020 - MPMX19_05741 0.51 -0.3 458,020 - MPMX19_05741 0.51 -1.1 458,289 + MPMX19_05741 0.70 -1.5 458,289 + MPMX19_05741 0.70 -1.1 458,289 + MPMX19_05741 0.70 -0.2 458,289 + MPMX19_05741 0.70 +0.4 458,290 - MPMX19_05741 0.70 -0.7 458,290 - MPMX19_05741 0.70 -1.6 458,290 - MPMX19_05741 0.70 +1.1
Or see this region's nucleotide sequence