Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_05402 and MPMX19_05403 are separated by 121 nucleotides MPMX19_05403 and MPMX19_05404 overlap by 4 nucleotides MPMX19_05404 and MPMX19_05405 overlap by 4 nucleotides MPMX19_05405 and MPMX19_05406 overlap by 4 nucleotides
MPMX19_05402: MPMX19_05402 - hypothetical protein, at 82,662 to 83,129
_05402
MPMX19_05403: MPMX19_05403 - hypothetical protein, at 83,251 to 84,000
_05403
MPMX19_05404: MPMX19_05404 - UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase, at 83,997 to 85,154
_05404
MPMX19_05405: MPMX19_05405 - 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase, at 85,151 to 85,906
_05405
MPMX19_05406: MPMX19_05406 - D-inositol-3-phosphate glycosyltransferase, at 85,903 to 87,012
_05406
Position (kb) 83
84
85
86 Strain fitness (log2 ratio) -2
-1
0
1
2 at 83.247 kb on - strand at 83.247 kb on - strand at 83.247 kb on - strand at 83.980 kb on + strand at 83.980 kb on + strand at 83.980 kb on + strand at 83.981 kb on - strand at 83.981 kb on - strand at 84.274 kb on + strand, within MPMX19_05404 at 84.274 kb on + strand, within MPMX19_05404 at 84.274 kb on + strand, within MPMX19_05404 at 84.275 kb on - strand, within MPMX19_05404 at 84.275 kb on - strand, within MPMX19_05404 at 84.586 kb on + strand, within MPMX19_05404 at 84.586 kb on + strand, within MPMX19_05404 at 84.586 kb on + strand, within MPMX19_05404 at 84.586 kb on + strand, within MPMX19_05404 at 84.586 kb on + strand, within MPMX19_05404 at 84.586 kb on + strand, within MPMX19_05404 at 84.587 kb on - strand, within MPMX19_05404 at 84.587 kb on - strand, within MPMX19_05404 at 84.676 kb on + strand, within MPMX19_05404 at 84.676 kb on + strand, within MPMX19_05404 at 84.676 kb on + strand, within MPMX19_05404 at 84.676 kb on + strand, within MPMX19_05404 at 84.676 kb on + strand, within MPMX19_05404 at 84.676 kb on + strand, within MPMX19_05404 at 84.677 kb on - strand, within MPMX19_05404 at 84.677 kb on - strand, within MPMX19_05404 at 84.677 kb on - strand, within MPMX19_05404 at 84.677 kb on - strand, within MPMX19_05404 at 84.677 kb on - strand, within MPMX19_05404 at 85.221 kb on + strand at 85.221 kb on + strand at 85.221 kb on + strand at 85.221 kb on + strand at 85.221 kb on + strand at 85.221 kb on + strand at 85.222 kb on - strand at 85.222 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 83,247 - +0.8 83,247 - -0.2 83,247 - -1.1 83,980 + -1.9 83,980 + -0.4 83,980 + -0.2 83,981 - +0.2 83,981 - +0.4 84,274 + MPMX19_05404 0.24 +0.4 84,274 + MPMX19_05404 0.24 +0.6 84,274 + MPMX19_05404 0.24 -0.8 84,275 - MPMX19_05404 0.24 -0.6 84,275 - MPMX19_05404 0.24 +1.4 84,586 + MPMX19_05404 0.51 +1.0 84,586 + MPMX19_05404 0.51 +1.4 84,586 + MPMX19_05404 0.51 -2.5 84,586 + MPMX19_05404 0.51 -1.5 84,586 + MPMX19_05404 0.51 +0.3 84,586 + MPMX19_05404 0.51 -0.3 84,587 - MPMX19_05404 0.51 +0.8 84,587 - MPMX19_05404 0.51 +1.3 84,676 + MPMX19_05404 0.59 +2.2 84,676 + MPMX19_05404 0.59 +0.9 84,676 + MPMX19_05404 0.59 -0.7 84,676 + MPMX19_05404 0.59 +0.1 84,676 + MPMX19_05404 0.59 -0.1 84,676 + MPMX19_05404 0.59 -0.1 84,677 - MPMX19_05404 0.59 +2.1 84,677 - MPMX19_05404 0.59 -0.6 84,677 - MPMX19_05404 0.59 -1.4 84,677 - MPMX19_05404 0.59 +0.2 84,677 - MPMX19_05404 0.59 -0.2 85,221 + +0.2 85,221 + -2.6 85,221 + +0.8 85,221 + -0.4 85,221 + -1.2 85,221 + +0.2 85,222 - +1.1 85,222 - -1.7
Or see this region's nucleotide sequence