Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_05401 and MPMX19_05402 are separated by 91 nucleotides MPMX19_05402 and MPMX19_05403 are separated by 121 nucleotides MPMX19_05403 and MPMX19_05404 overlap by 4 nucleotides
MPMX19_05401: MPMX19_05401 - 2-methylisocitrate lyase, at 81,725 to 82,570
_05401
MPMX19_05402: MPMX19_05402 - hypothetical protein, at 82,662 to 83,129
_05402
MPMX19_05403: MPMX19_05403 - hypothetical protein, at 83,251 to 84,000
_05403
MPMX19_05404: MPMX19_05404 - UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase, at 83,997 to 85,154
_05404
Position (kb) 82
83
84 Strain fitness (log2 ratio) -2
-1
0
1 at 81.677 kb on - strand at 82.023 kb on + strand, within MPMX19_05401 at 82.023 kb on + strand, within MPMX19_05401 at 82.023 kb on + strand, within MPMX19_05401 at 82.023 kb on + strand, within MPMX19_05401 at 82.023 kb on + strand, within MPMX19_05401 at 82.023 kb on + strand, within MPMX19_05401 at 82.023 kb on + strand, within MPMX19_05401 at 82.023 kb on + strand, within MPMX19_05401 at 82.023 kb on + strand, within MPMX19_05401 at 82.024 kb on - strand, within MPMX19_05401 at 82.024 kb on - strand, within MPMX19_05401 at 82.050 kb on + strand, within MPMX19_05401 at 82.051 kb on - strand, within MPMX19_05401 at 82.051 kb on - strand, within MPMX19_05401 at 82.051 kb on - strand, within MPMX19_05401 at 82.194 kb on + strand, within MPMX19_05401 at 82.195 kb on - strand, within MPMX19_05401 at 82.195 kb on - strand, within MPMX19_05401 at 82.195 kb on - strand, within MPMX19_05401 at 82.195 kb on - strand, within MPMX19_05401 at 82.608 kb on - strand at 82.699 kb on + strand at 82.699 kb on + strand at 82.699 kb on + strand at 82.700 kb on - strand at 82.700 kb on - strand at 82.700 kb on - strand at 82.700 kb on - strand at 82.700 kb on - strand at 82.700 kb on - strand at 82.700 kb on - strand at 82.837 kb on + strand, within MPMX19_05402 at 82.837 kb on + strand, within MPMX19_05402 at 82.837 kb on + strand, within MPMX19_05402 at 82.837 kb on + strand, within MPMX19_05402 at 82.837 kb on + strand, within MPMX19_05402 at 82.837 kb on + strand, within MPMX19_05402 at 82.837 kb on + strand, within MPMX19_05402 at 82.837 kb on + strand, within MPMX19_05402 at 82.837 kb on + strand, within MPMX19_05402 at 82.837 kb on + strand, within MPMX19_05402 at 82.837 kb on + strand, within MPMX19_05402 at 82.838 kb on - strand, within MPMX19_05402 at 82.838 kb on - strand, within MPMX19_05402 at 82.838 kb on - strand, within MPMX19_05402 at 82.838 kb on - strand, within MPMX19_05402 at 82.838 kb on - strand, within MPMX19_05402 at 82.838 kb on - strand, within MPMX19_05402 at 82.838 kb on - strand, within MPMX19_05402 at 82.838 kb on - strand, within MPMX19_05402 at 82.838 kb on - strand, within MPMX19_05402 at 82.838 kb on - strand, within MPMX19_05402 at 83.247 kb on - strand at 83.247 kb on - strand at 83.247 kb on - strand at 83.980 kb on + strand at 83.980 kb on + strand at 83.980 kb on + strand at 83.981 kb on - strand at 83.981 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 81,677 - -0.6 82,023 + MPMX19_05401 0.35 -1.9 82,023 + MPMX19_05401 0.35 -0.4 82,023 + MPMX19_05401 0.35 -0.8 82,023 + MPMX19_05401 0.35 +0.8 82,023 + MPMX19_05401 0.35 +0.8 82,023 + MPMX19_05401 0.35 -0.9 82,023 + MPMX19_05401 0.35 -1.3 82,023 + MPMX19_05401 0.35 -0.2 82,023 + MPMX19_05401 0.35 +0.3 82,024 - MPMX19_05401 0.35 -1.1 82,024 - MPMX19_05401 0.35 +0.5 82,050 + MPMX19_05401 0.38 -0.1 82,051 - MPMX19_05401 0.39 +0.6 82,051 - MPMX19_05401 0.39 -0.9 82,051 - MPMX19_05401 0.39 -1.3 82,194 + MPMX19_05401 0.55 +0.1 82,195 - MPMX19_05401 0.56 -0.8 82,195 - MPMX19_05401 0.56 +0.3 82,195 - MPMX19_05401 0.56 -0.5 82,195 - MPMX19_05401 0.56 -0.8 82,608 - +0.6 82,699 + -1.4 82,699 + -1.2 82,699 + -0.6 82,700 - -0.9 82,700 - -1.9 82,700 - -1.1 82,700 - +0.9 82,700 - -1.2 82,700 - +1.5 82,700 - -1.6 82,837 + MPMX19_05402 0.37 +0.3 82,837 + MPMX19_05402 0.37 +0.5 82,837 + MPMX19_05402 0.37 +1.0 82,837 + MPMX19_05402 0.37 -0.9 82,837 + MPMX19_05402 0.37 -0.8 82,837 + MPMX19_05402 0.37 -0.1 82,837 + MPMX19_05402 0.37 +0.1 82,837 + MPMX19_05402 0.37 +0.2 82,837 + MPMX19_05402 0.37 +0.1 82,837 + MPMX19_05402 0.37 -0.5 82,837 + MPMX19_05402 0.37 -0.7 82,838 - MPMX19_05402 0.38 -0.4 82,838 - MPMX19_05402 0.38 -0.4 82,838 - MPMX19_05402 0.38 +0.1 82,838 - MPMX19_05402 0.38 -0.2 82,838 - MPMX19_05402 0.38 -0.1 82,838 - MPMX19_05402 0.38 +0.5 82,838 - MPMX19_05402 0.38 +0.2 82,838 - MPMX19_05402 0.38 +1.2 82,838 - MPMX19_05402 0.38 +0.2 82,838 - MPMX19_05402 0.38 +0.4 83,247 - +0.8 83,247 - -0.2 83,247 - -1.1 83,980 + -1.9 83,980 + -0.4 83,980 + -0.2 83,981 - +0.2 83,981 - +0.4
Or see this region's nucleotide sequence