Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_05374 and MPMX19_05375 are separated by 27 nucleotides MPMX19_05375 and MPMX19_05376 are separated by 159 nucleotides
MPMX19_05374: MPMX19_05374 - hypothetical protein, at 46,752 to 48,593
_05374
MPMX19_05375: MPMX19_05375 - hypothetical protein, at 48,621 to 49,046
_05375
MPMX19_05376: MPMX19_05376 - hypothetical protein, at 49,206 to 49,976
_05376
Position (kb) 48
49
50 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 47.961 kb on + strand, within MPMX19_05374 at 47.961 kb on + strand, within MPMX19_05374 at 47.961 kb on + strand, within MPMX19_05374 at 47.961 kb on + strand, within MPMX19_05374 at 47.961 kb on + strand, within MPMX19_05374 at 47.961 kb on + strand, within MPMX19_05374 at 47.961 kb on + strand, within MPMX19_05374 at 47.961 kb on + strand, within MPMX19_05374 at 47.961 kb on + strand, within MPMX19_05374 at 47.961 kb on + strand, within MPMX19_05374 at 47.961 kb on + strand, within MPMX19_05374 at 47.961 kb on + strand, within MPMX19_05374 at 47.961 kb on + strand, within MPMX19_05374 at 47.961 kb on + strand, within MPMX19_05374 at 47.961 kb on + strand, within MPMX19_05374 at 47.961 kb on + strand, within MPMX19_05374 at 47.961 kb on + strand, within MPMX19_05374 at 47.961 kb on + strand, within MPMX19_05374 at 47.961 kb on + strand, within MPMX19_05374 at 47.961 kb on + strand, within MPMX19_05374 at 47.961 kb on + strand, within MPMX19_05374 at 47.962 kb on - strand, within MPMX19_05374 at 47.962 kb on - strand, within MPMX19_05374 at 47.962 kb on - strand, within MPMX19_05374 at 47.962 kb on - strand, within MPMX19_05374 at 47.962 kb on - strand, within MPMX19_05374 at 47.962 kb on - strand, within MPMX19_05374 at 47.962 kb on - strand, within MPMX19_05374 at 47.962 kb on - strand, within MPMX19_05374 at 47.962 kb on - strand, within MPMX19_05374 at 47.962 kb on - strand, within MPMX19_05374 at 47.962 kb on - strand, within MPMX19_05374 at 47.962 kb on - strand, within MPMX19_05374 at 47.962 kb on - strand, within MPMX19_05374 at 47.962 kb on - strand, within MPMX19_05374 at 47.991 kb on + strand, within MPMX19_05374 at 47.991 kb on + strand, within MPMX19_05374 at 47.991 kb on + strand, within MPMX19_05374 at 47.991 kb on + strand, within MPMX19_05374 at 47.991 kb on + strand, within MPMX19_05374 at 47.991 kb on + strand, within MPMX19_05374 at 47.991 kb on + strand, within MPMX19_05374 at 47.991 kb on + strand, within MPMX19_05374 at 47.992 kb on - strand, within MPMX19_05374 at 47.992 kb on - strand, within MPMX19_05374 at 47.992 kb on - strand, within MPMX19_05374 at 47.992 kb on - strand, within MPMX19_05374 at 47.992 kb on - strand, within MPMX19_05374 at 47.992 kb on - strand, within MPMX19_05374 at 47.992 kb on - strand, within MPMX19_05374 at 48.154 kb on - strand, within MPMX19_05374 at 48.154 kb on - strand, within MPMX19_05374 at 48.229 kb on - strand, within MPMX19_05374 at 48.229 kb on - strand, within MPMX19_05374 at 48.229 kb on - strand, within MPMX19_05374 at 48.229 kb on - strand, within MPMX19_05374 at 48.229 kb on - strand, within MPMX19_05374 at 48.345 kb on + strand, within MPMX19_05374 at 48.345 kb on + strand, within MPMX19_05374 at 48.345 kb on + strand, within MPMX19_05374 at 48.346 kb on - strand, within MPMX19_05374 at 48.453 kb on + strand at 48.454 kb on - strand at 48.454 kb on - strand at 48.454 kb on - strand at 48.454 kb on - strand at 48.454 kb on - strand at 48.454 kb on - strand at 48.498 kb on + strand at 48.498 kb on + strand at 48.498 kb on + strand at 48.498 kb on + strand at 48.498 kb on + strand at 48.498 kb on + strand at 48.498 kb on + strand at 48.498 kb on + strand at 48.498 kb on + strand at 48.498 kb on + strand at 48.498 kb on + strand at 48.498 kb on + strand at 48.498 kb on + strand at 48.498 kb on + strand at 48.498 kb on + strand at 48.499 kb on - strand at 48.499 kb on - strand at 48.499 kb on - strand at 48.499 kb on - strand at 48.499 kb on - strand at 48.499 kb on - strand at 48.499 kb on - strand at 48.499 kb on - strand at 48.499 kb on - strand at 48.499 kb on - strand at 48.499 kb on - strand at 48.499 kb on - strand at 48.499 kb on - strand at 48.499 kb on - strand at 48.499 kb on - strand at 48.499 kb on - strand at 48.500 kb on + strand at 48.500 kb on + strand at 48.500 kb on + strand at 48.500 kb on + strand at 48.500 kb on + strand at 48.500 kb on + strand at 48.500 kb on + strand at 48.500 kb on + strand at 48.500 kb on + strand at 48.500 kb on + strand at 48.500 kb on + strand at 48.500 kb on + strand at 48.500 kb on + strand at 48.500 kb on + strand at 48.500 kb on + strand at 48.500 kb on + strand at 48.500 kb on + strand at 48.500 kb on + strand at 48.501 kb on - strand at 48.501 kb on - strand at 48.501 kb on - strand at 48.501 kb on - strand at 48.501 kb on - strand at 48.501 kb on - strand at 48.501 kb on - strand at 48.501 kb on - strand at 48.501 kb on - strand at 48.501 kb on - strand at 48.501 kb on - strand at 48.501 kb on - strand at 48.501 kb on - strand at 48.501 kb on - strand at 48.501 kb on - strand at 48.501 kb on - strand at 48.501 kb on - strand at 48.501 kb on - strand at 48.501 kb on - strand at 48.501 kb on - strand at 48.501 kb on - strand at 48.501 kb on - strand at 48.501 kb on - strand at 48.501 kb on - strand at 48.501 kb on - strand at 48.592 kb on - strand at 48.592 kb on - strand at 48.592 kb on - strand at 48.729 kb on + strand, within MPMX19_05375 at 48.729 kb on + strand, within MPMX19_05375 at 48.729 kb on + strand, within MPMX19_05375 at 48.729 kb on + strand, within MPMX19_05375 at 48.729 kb on + strand, within MPMX19_05375 at 48.729 kb on + strand, within MPMX19_05375 at 48.729 kb on + strand, within MPMX19_05375 at 48.729 kb on + strand, within MPMX19_05375 at 48.729 kb on + strand, within MPMX19_05375 at 48.730 kb on - strand, within MPMX19_05375 at 48.730 kb on - strand, within MPMX19_05375 at 48.730 kb on - strand, within MPMX19_05375 at 48.730 kb on - strand, within MPMX19_05375 at 48.730 kb on - strand, within MPMX19_05375 at 48.730 kb on - strand, within MPMX19_05375 at 48.730 kb on - strand, within MPMX19_05375 at 48.731 kb on + strand, within MPMX19_05375 at 49.095 kb on + strand at 49.095 kb on + strand at 49.096 kb on - strand at 49.096 kb on - strand at 49.229 kb on + strand at 49.229 kb on + strand at 49.229 kb on + strand at 49.230 kb on - strand at 49.230 kb on - strand at 49.230 kb on - strand at 49.230 kb on - strand at 49.614 kb on + strand, within MPMX19_05376 at 49.614 kb on + strand, within MPMX19_05376 at 49.614 kb on + strand, within MPMX19_05376 at 49.614 kb on + strand, within MPMX19_05376 at 49.614 kb on + strand, within MPMX19_05376 at 49.614 kb on + strand, within MPMX19_05376 at 49.614 kb on + strand, within MPMX19_05376 at 49.614 kb on + strand, within MPMX19_05376 at 49.614 kb on + strand, within MPMX19_05376 at 49.615 kb on - strand, within MPMX19_05376 at 49.615 kb on - strand, within MPMX19_05376 at 49.615 kb on - strand, within MPMX19_05376 at 49.615 kb on - strand, within MPMX19_05376 at 49.615 kb on - strand, within MPMX19_05376 at 49.615 kb on - strand, within MPMX19_05376 at 49.615 kb on - strand, within MPMX19_05376 at 49.615 kb on - strand, within MPMX19_05376 at 49.615 kb on - strand, within MPMX19_05376 at 49.615 kb on - strand, within MPMX19_05376 at 49.615 kb on - strand, within MPMX19_05376 at 50.017 kb on + strand at 50.017 kb on + strand at 50.018 kb on - strand at 50.018 kb on - strand at 50.018 kb on - strand at 50.018 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 47,961 + MPMX19_05374 0.66 +1.2 47,961 + MPMX19_05374 0.66 -0.6 47,961 + MPMX19_05374 0.66 +0.2 47,961 + MPMX19_05374 0.66 +0.2 47,961 + MPMX19_05374 0.66 -2.8 47,961 + MPMX19_05374 0.66 +0.1 47,961 + MPMX19_05374 0.66 -0.8 47,961 + MPMX19_05374 0.66 -0.2 47,961 + MPMX19_05374 0.66 +1.8 47,961 + MPMX19_05374 0.66 +0.7 47,961 + MPMX19_05374 0.66 +0.9 47,961 + MPMX19_05374 0.66 +1.8 47,961 + MPMX19_05374 0.66 -0.7 47,961 + MPMX19_05374 0.66 +0.1 47,961 + MPMX19_05374 0.66 -0.0 47,961 + MPMX19_05374 0.66 +0.1 47,961 + MPMX19_05374 0.66 +0.6 47,961 + MPMX19_05374 0.66 -0.2 47,961 + MPMX19_05374 0.66 -0.7 47,961 + MPMX19_05374 0.66 +1.4 47,961 + MPMX19_05374 0.66 -0.8 47,962 - MPMX19_05374 0.66 -0.2 47,962 - MPMX19_05374 0.66 -1.7 47,962 - MPMX19_05374 0.66 -1.7 47,962 - MPMX19_05374 0.66 -0.6 47,962 - MPMX19_05374 0.66 -0.4 47,962 - MPMX19_05374 0.66 -1.2 47,962 - MPMX19_05374 0.66 -1.7 47,962 - MPMX19_05374 0.66 -0.1 47,962 - MPMX19_05374 0.66 -1.6 47,962 - MPMX19_05374 0.66 -0.8 47,962 - MPMX19_05374 0.66 +0.2 47,962 - MPMX19_05374 0.66 -2.1 47,962 - MPMX19_05374 0.66 +0.3 47,962 - MPMX19_05374 0.66 -2.3 47,991 + MPMX19_05374 0.67 -0.7 47,991 + MPMX19_05374 0.67 +0.3 47,991 + MPMX19_05374 0.67 +0.0 47,991 + MPMX19_05374 0.67 -0.6 47,991 + MPMX19_05374 0.67 +0.2 47,991 + MPMX19_05374 0.67 +0.1 47,991 + MPMX19_05374 0.67 -1.7 47,991 + MPMX19_05374 0.67 +0.5 47,992 - MPMX19_05374 0.67 -1.2 47,992 - MPMX19_05374 0.67 -0.8 47,992 - MPMX19_05374 0.67 -0.8 47,992 - MPMX19_05374 0.67 -1.5 47,992 - MPMX19_05374 0.67 +0.4 47,992 - MPMX19_05374 0.67 -0.1 47,992 - MPMX19_05374 0.67 -0.5 48,154 - MPMX19_05374 0.76 -0.9 48,154 - MPMX19_05374 0.76 +0.7 48,229 - MPMX19_05374 0.80 -1.5 48,229 - MPMX19_05374 0.80 +0.6 48,229 - MPMX19_05374 0.80 -0.5 48,229 - MPMX19_05374 0.80 +0.6 48,229 - MPMX19_05374 0.80 -1.6 48,345 + MPMX19_05374 0.86 +0.6 48,345 + MPMX19_05374 0.86 -0.2 48,345 + MPMX19_05374 0.86 -0.7 48,346 - MPMX19_05374 0.87 +0.1 48,453 + -0.9 48,454 - -0.5 48,454 - +0.5 48,454 - -1.8 48,454 - +0.4 48,454 - -1.7 48,454 - -1.1 48,498 + +0.6 48,498 + +0.5 48,498 + -0.8 48,498 + -1.9 48,498 + +0.3 48,498 + -1.0 48,498 + -0.1 48,498 + -0.8 48,498 + +1.3 48,498 + -0.4 48,498 + +0.1 48,498 + -0.2 48,498 + -1.2 48,498 + +1.3 48,498 + -0.7 48,499 - +0.1 48,499 - -0.2 48,499 - -0.6 48,499 - -0.8 48,499 - -0.7 48,499 - -1.7 48,499 - -0.2 48,499 - -0.6 48,499 - -0.2 48,499 - -1.2 48,499 - -0.8 48,499 - +0.8 48,499 - +0.4 48,499 - -1.0 48,499 - -0.5 48,499 - +0.9 48,500 + +0.8 48,500 + -0.9 48,500 + -0.2 48,500 + +0.9 48,500 + +0.6 48,500 + -1.0 48,500 + -1.6 48,500 + -2.2 48,500 + +0.2 48,500 + -0.1 48,500 + -0.1 48,500 + -0.1 48,500 + -0.7 48,500 + +0.4 48,500 + +0.3 48,500 + -1.4 48,500 + +0.4 48,500 + +1.1 48,501 - +1.0 48,501 - +0.8 48,501 - +0.9 48,501 - -0.9 48,501 - +1.2 48,501 - +0.9 48,501 - -0.0 48,501 - -0.4 48,501 - -0.2 48,501 - -0.2 48,501 - -0.2 48,501 - -3.3 48,501 - -0.1 48,501 - +0.1 48,501 - +0.8 48,501 - -0.8 48,501 - +0.5 48,501 - +0.2 48,501 - -0.2 48,501 - -0.8 48,501 - -0.6 48,501 - -1.3 48,501 - +1.1 48,501 - +0.9 48,501 - -1.7 48,592 - +0.1 48,592 - -0.7 48,592 - -0.6 48,729 + MPMX19_05375 0.25 -0.6 48,729 + MPMX19_05375 0.25 +1.3 48,729 + MPMX19_05375 0.25 -1.4 48,729 + MPMX19_05375 0.25 +0.0 48,729 + MPMX19_05375 0.25 -1.6 48,729 + MPMX19_05375 0.25 +0.2 48,729 + MPMX19_05375 0.25 -0.2 48,729 + MPMX19_05375 0.25 +0.2 48,729 + MPMX19_05375 0.25 -2.1 48,730 - MPMX19_05375 0.26 -0.2 48,730 - MPMX19_05375 0.26 -1.2 48,730 - MPMX19_05375 0.26 -0.8 48,730 - MPMX19_05375 0.26 +0.4 48,730 - MPMX19_05375 0.26 -1.2 48,730 - MPMX19_05375 0.26 +0.5 48,730 - MPMX19_05375 0.26 -1.0 48,731 + MPMX19_05375 0.26 -0.4 49,095 + -0.4 49,095 + -0.1 49,096 - -0.1 49,096 - +0.5 49,229 + +0.2 49,229 + +0.5 49,229 + +0.5 49,230 - -0.0 49,230 - +0.8 49,230 - +0.5 49,230 - -0.5 49,614 + MPMX19_05376 0.53 -2.3 49,614 + MPMX19_05376 0.53 -0.6 49,614 + MPMX19_05376 0.53 -0.6 49,614 + MPMX19_05376 0.53 -1.6 49,614 + MPMX19_05376 0.53 -0.2 49,614 + MPMX19_05376 0.53 -0.9 49,614 + MPMX19_05376 0.53 -1.8 49,614 + MPMX19_05376 0.53 -0.4 49,614 + MPMX19_05376 0.53 +0.8 49,615 - MPMX19_05376 0.53 -0.2 49,615 - MPMX19_05376 0.53 +0.6 49,615 - MPMX19_05376 0.53 -1.9 49,615 - MPMX19_05376 0.53 -0.3 49,615 - MPMX19_05376 0.53 -1.6 49,615 - MPMX19_05376 0.53 -0.7 49,615 - MPMX19_05376 0.53 +0.1 49,615 - MPMX19_05376 0.53 -0.5 49,615 - MPMX19_05376 0.53 +0.3 49,615 - MPMX19_05376 0.53 -1.2 49,615 - MPMX19_05376 0.53 -1.1 50,017 + +0.8 50,017 + +0.5 50,018 - +0.4 50,018 - -0.6 50,018 - +0.3 50,018 - +0.5
Or see this region's nucleotide sequence