Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_05263 and MPMX19_05264 are separated by 233 nucleotides MPMX19_05264 and MPMX19_05265 are separated by 23 nucleotides MPMX19_05265 and MPMX19_05266 are separated by 31 nucleotides
MPMX19_05263: MPMX19_05263 - hypothetical protein, at 797,887 to 799,308
_05263
MPMX19_05264: MPMX19_05264 - hypothetical protein, at 799,542 to 800,015
_05264
MPMX19_05265: MPMX19_05265 - hypothetical protein, at 800,039 to 800,668
_05265
MPMX19_05266: MPMX19_05266 - Aspartate aminotransferase, at 800,700 to 801,872
_05266
Position (kb) 800
801 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 799.315 kb on - strand at 799.330 kb on + strand at 799.330 kb on + strand at 799.330 kb on + strand at 799.330 kb on + strand at 799.330 kb on + strand at 799.330 kb on + strand at 799.382 kb on + strand at 799.382 kb on + strand at 799.383 kb on - strand at 799.478 kb on + strand at 799.478 kb on + strand at 799.479 kb on - strand at 799.647 kb on + strand, within MPMX19_05264 at 799.647 kb on + strand, within MPMX19_05264 at 799.647 kb on + strand, within MPMX19_05264 at 799.648 kb on - strand, within MPMX19_05264 at 799.648 kb on - strand, within MPMX19_05264 at 799.648 kb on - strand, within MPMX19_05264 at 799.648 kb on - strand, within MPMX19_05264 at 799.648 kb on - strand, within MPMX19_05264 at 799.648 kb on - strand, within MPMX19_05264 at 799.679 kb on + strand, within MPMX19_05264 at 799.679 kb on + strand, within MPMX19_05264 at 799.679 kb on + strand, within MPMX19_05264 at 799.680 kb on - strand, within MPMX19_05264 at 799.899 kb on + strand, within MPMX19_05264 at 799.899 kb on + strand, within MPMX19_05264 at 799.899 kb on + strand, within MPMX19_05264 at 799.899 kb on + strand, within MPMX19_05264 at 799.899 kb on + strand, within MPMX19_05264 at 799.899 kb on + strand, within MPMX19_05264 at 799.899 kb on + strand, within MPMX19_05264 at 799.899 kb on + strand, within MPMX19_05264 at 799.899 kb on + strand, within MPMX19_05264 at 799.900 kb on - strand, within MPMX19_05264 at 799.900 kb on - strand, within MPMX19_05264 at 799.900 kb on - strand, within MPMX19_05264 at 799.900 kb on - strand, within MPMX19_05264 at 799.900 kb on - strand, within MPMX19_05264 at 799.900 kb on - strand, within MPMX19_05264 at 799.900 kb on - strand, within MPMX19_05264 at 799.900 kb on - strand, within MPMX19_05264 at 799.900 kb on - strand, within MPMX19_05264 at 799.900 kb on - strand, within MPMX19_05264 at 800.055 kb on + strand at 800.190 kb on + strand, within MPMX19_05265 at 800.208 kb on + strand, within MPMX19_05265 at 800.208 kb on + strand, within MPMX19_05265 at 800.208 kb on + strand, within MPMX19_05265 at 800.208 kb on + strand, within MPMX19_05265 at 800.208 kb on + strand, within MPMX19_05265 at 800.208 kb on + strand, within MPMX19_05265 at 800.208 kb on + strand, within MPMX19_05265 at 800.208 kb on + strand, within MPMX19_05265 at 800.208 kb on + strand, within MPMX19_05265 at 800.209 kb on - strand, within MPMX19_05265 at 800.223 kb on + strand, within MPMX19_05265 at 800.223 kb on + strand, within MPMX19_05265 at 800.223 kb on + strand, within MPMX19_05265 at 800.223 kb on + strand, within MPMX19_05265 at 800.223 kb on + strand, within MPMX19_05265 at 800.223 kb on + strand, within MPMX19_05265 at 800.224 kb on - strand, within MPMX19_05265 at 800.224 kb on - strand, within MPMX19_05265 at 800.224 kb on - strand, within MPMX19_05265 at 800.319 kb on + strand, within MPMX19_05265 at 800.320 kb on - strand, within MPMX19_05265 at 800.320 kb on - strand, within MPMX19_05265 at 800.320 kb on - strand, within MPMX19_05265 at 800.320 kb on - strand, within MPMX19_05265 at 800.320 kb on - strand, within MPMX19_05265 at 800.445 kb on + strand, within MPMX19_05265 at 800.445 kb on + strand, within MPMX19_05265 at 800.445 kb on + strand, within MPMX19_05265 at 800.445 kb on + strand, within MPMX19_05265 at 800.446 kb on - strand, within MPMX19_05265 at 800.499 kb on + strand, within MPMX19_05265 at 800.499 kb on + strand, within MPMX19_05265 at 800.499 kb on + strand, within MPMX19_05265 at 800.499 kb on + strand, within MPMX19_05265 at 800.499 kb on + strand, within MPMX19_05265 at 800.499 kb on + strand, within MPMX19_05265 at 800.499 kb on + strand, within MPMX19_05265 at 800.499 kb on + strand, within MPMX19_05265 at 800.499 kb on + strand, within MPMX19_05265 at 800.499 kb on + strand, within MPMX19_05265 at 800.499 kb on + strand, within MPMX19_05265 at 800.500 kb on - strand, within MPMX19_05265 at 800.500 kb on - strand, within MPMX19_05265 at 800.500 kb on - strand, within MPMX19_05265 at 800.500 kb on - strand, within MPMX19_05265 at 800.500 kb on - strand, within MPMX19_05265 at 800.500 kb on - strand, within MPMX19_05265 at 800.500 kb on - strand, within MPMX19_05265 at 800.500 kb on - strand, within MPMX19_05265 at 800.500 kb on - strand, within MPMX19_05265 at 800.500 kb on - strand, within MPMX19_05265 at 800.500 kb on - strand, within MPMX19_05265 at 800.500 kb on - strand, within MPMX19_05265 at 800.500 kb on - strand, within MPMX19_05265 at 800.500 kb on - strand, within MPMX19_05265 at 800.500 kb on - strand, within MPMX19_05265 at 800.500 kb on - strand, within MPMX19_05265 at 800.500 kb on - strand, within MPMX19_05265 at 800.556 kb on + strand, within MPMX19_05265 at 800.556 kb on + strand, within MPMX19_05265 at 800.556 kb on + strand, within MPMX19_05265 at 800.556 kb on + strand, within MPMX19_05265 at 800.557 kb on - strand, within MPMX19_05265 at 800.557 kb on - strand, within MPMX19_05265 at 800.616 kb on + strand at 800.616 kb on + strand at 800.616 kb on + strand at 800.617 kb on - strand at 800.617 kb on - strand at 800.617 kb on - strand at 800.617 kb on - strand at 800.617 kb on - strand at 800.617 kb on - strand at 800.617 kb on - strand at 800.788 kb on + strand at 800.788 kb on + strand at 800.788 kb on + strand at 800.788 kb on + strand at 800.788 kb on + strand at 800.788 kb on + strand at 800.788 kb on + strand at 800.789 kb on - strand at 800.789 kb on - strand at 800.789 kb on - strand at 800.789 kb on - strand at 800.789 kb on - strand at 800.789 kb on - strand at 800.789 kb on - strand at 800.789 kb on - strand at 800.789 kb on - strand at 800.789 kb on - strand at 800.789 kb on - strand at 800.789 kb on - strand at 800.789 kb on - strand at 800.789 kb on - strand at 800.789 kb on - strand at 800.789 kb on - strand at 800.789 kb on - strand at 800.789 kb on - strand at 800.789 kb on - strand at 800.789 kb on - strand at 800.789 kb on - strand at 800.789 kb on - strand at 801.038 kb on - strand, within MPMX19_05266 at 801.038 kb on - strand, within MPMX19_05266 at 801.038 kb on - strand, within MPMX19_05266 at 801.038 kb on - strand, within MPMX19_05266 at 801.038 kb on - strand, within MPMX19_05266 at 801.038 kb on - strand, within MPMX19_05266 at 801.038 kb on - strand, within MPMX19_05266 at 801.134 kb on - strand, within MPMX19_05266 at 801.244 kb on + strand, within MPMX19_05266 at 801.245 kb on - strand, within MPMX19_05266 at 801.245 kb on - strand, within MPMX19_05266 at 801.652 kb on + strand, within MPMX19_05266
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 799,315 - +0.6 799,330 + -2.8 799,330 + +0.3 799,330 + -2.2 799,330 + -0.9 799,330 + -0.4 799,330 + -0.8 799,382 + -2.3 799,382 + -0.8 799,383 - -0.0 799,478 + -1.0 799,478 + -0.3 799,479 - -1.0 799,647 + MPMX19_05264 0.22 -0.4 799,647 + MPMX19_05264 0.22 -0.9 799,647 + MPMX19_05264 0.22 -0.6 799,648 - MPMX19_05264 0.22 -0.4 799,648 - MPMX19_05264 0.22 -0.2 799,648 - MPMX19_05264 0.22 +0.5 799,648 - MPMX19_05264 0.22 -1.6 799,648 - MPMX19_05264 0.22 +0.5 799,648 - MPMX19_05264 0.22 +0.6 799,679 + MPMX19_05264 0.29 +1.8 799,679 + MPMX19_05264 0.29 +0.5 799,679 + MPMX19_05264 0.29 +1.2 799,680 - MPMX19_05264 0.29 -0.4 799,899 + MPMX19_05264 0.75 +1.2 799,899 + MPMX19_05264 0.75 -1.1 799,899 + MPMX19_05264 0.75 -0.3 799,899 + MPMX19_05264 0.75 -0.9 799,899 + MPMX19_05264 0.75 -0.4 799,899 + MPMX19_05264 0.75 -0.5 799,899 + MPMX19_05264 0.75 -1.8 799,899 + MPMX19_05264 0.75 -1.9 799,899 + MPMX19_05264 0.75 -1.5 799,900 - MPMX19_05264 0.76 -0.8 799,900 - MPMX19_05264 0.76 -0.9 799,900 - MPMX19_05264 0.76 -1.5 799,900 - MPMX19_05264 0.76 +1.2 799,900 - MPMX19_05264 0.76 -0.9 799,900 - MPMX19_05264 0.76 -2.9 799,900 - MPMX19_05264 0.76 -0.9 799,900 - MPMX19_05264 0.76 -0.5 799,900 - MPMX19_05264 0.76 +0.3 799,900 - MPMX19_05264 0.76 +0.1 800,055 + -0.6 800,190 + MPMX19_05265 0.24 -0.2 800,208 + MPMX19_05265 0.27 +0.5 800,208 + MPMX19_05265 0.27 -0.8 800,208 + MPMX19_05265 0.27 -2.4 800,208 + MPMX19_05265 0.27 -0.4 800,208 + MPMX19_05265 0.27 +1.6 800,208 + MPMX19_05265 0.27 -1.2 800,208 + MPMX19_05265 0.27 +0.4 800,208 + MPMX19_05265 0.27 -0.5 800,208 + MPMX19_05265 0.27 +0.5 800,209 - MPMX19_05265 0.27 -1.0 800,223 + MPMX19_05265 0.29 -0.9 800,223 + MPMX19_05265 0.29 -0.3 800,223 + MPMX19_05265 0.29 +1.4 800,223 + MPMX19_05265 0.29 -0.3 800,223 + MPMX19_05265 0.29 -0.4 800,223 + MPMX19_05265 0.29 -0.9 800,224 - MPMX19_05265 0.29 -0.4 800,224 - MPMX19_05265 0.29 -0.4 800,224 - MPMX19_05265 0.29 -0.4 800,319 + MPMX19_05265 0.44 -0.9 800,320 - MPMX19_05265 0.45 -2.4 800,320 - MPMX19_05265 0.45 -0.2 800,320 - MPMX19_05265 0.45 -0.7 800,320 - MPMX19_05265 0.45 -1.3 800,320 - MPMX19_05265 0.45 +0.1 800,445 + MPMX19_05265 0.64 +0.0 800,445 + MPMX19_05265 0.64 +1.3 800,445 + MPMX19_05265 0.64 -0.5 800,445 + MPMX19_05265 0.64 -1.2 800,446 - MPMX19_05265 0.65 -0.6 800,499 + MPMX19_05265 0.73 -1.2 800,499 + MPMX19_05265 0.73 +0.5 800,499 + MPMX19_05265 0.73 -0.0 800,499 + MPMX19_05265 0.73 -1.9 800,499 + MPMX19_05265 0.73 -0.9 800,499 + MPMX19_05265 0.73 -0.4 800,499 + MPMX19_05265 0.73 -0.8 800,499 + MPMX19_05265 0.73 -0.4 800,499 + MPMX19_05265 0.73 -0.7 800,499 + MPMX19_05265 0.73 -1.4 800,499 + MPMX19_05265 0.73 +0.1 800,500 - MPMX19_05265 0.73 -2.1 800,500 - MPMX19_05265 0.73 +0.3 800,500 - MPMX19_05265 0.73 -1.0 800,500 - MPMX19_05265 0.73 +0.2 800,500 - MPMX19_05265 0.73 +0.1 800,500 - MPMX19_05265 0.73 -0.9 800,500 - MPMX19_05265 0.73 -0.4 800,500 - MPMX19_05265 0.73 -0.3 800,500 - MPMX19_05265 0.73 -0.7 800,500 - MPMX19_05265 0.73 -1.4 800,500 - MPMX19_05265 0.73 -0.8 800,500 - MPMX19_05265 0.73 +0.6 800,500 - MPMX19_05265 0.73 +0.1 800,500 - MPMX19_05265 0.73 -0.7 800,500 - MPMX19_05265 0.73 +0.1 800,500 - MPMX19_05265 0.73 -0.9 800,500 - MPMX19_05265 0.73 -1.4 800,556 + MPMX19_05265 0.82 -1.6 800,556 + MPMX19_05265 0.82 +1.9 800,556 + MPMX19_05265 0.82 +0.5 800,556 + MPMX19_05265 0.82 +0.2 800,557 - MPMX19_05265 0.82 +2.2 800,557 - MPMX19_05265 0.82 -0.4 800,616 + -1.3 800,616 + -0.4 800,616 + +0.3 800,617 - -0.4 800,617 - -2.5 800,617 - -1.3 800,617 - +1.2 800,617 - +0.1 800,617 - +1.2 800,617 - -1.8 800,788 + +0.3 800,788 + +1.2 800,788 + +0.5 800,788 + +0.1 800,788 + -0.2 800,788 + -0.2 800,788 + -1.4 800,789 - -0.7 800,789 - -1.2 800,789 - +0.2 800,789 - +0.4 800,789 - +1.6 800,789 - -0.1 800,789 - -0.3 800,789 - +0.9 800,789 - +0.1 800,789 - +0.3 800,789 - +0.4 800,789 - -1.2 800,789 - -0.4 800,789 - +0.5 800,789 - +0.2 800,789 - +0.2 800,789 - -0.1 800,789 - -0.2 800,789 - +0.4 800,789 - +1.3 800,789 - -0.9 800,789 - -1.4 801,038 - MPMX19_05266 0.29 +0.2 801,038 - MPMX19_05266 0.29 -2.3 801,038 - MPMX19_05266 0.29 -1.2 801,038 - MPMX19_05266 0.29 -0.0 801,038 - MPMX19_05266 0.29 -1.8 801,038 - MPMX19_05266 0.29 -0.7 801,038 - MPMX19_05266 0.29 -0.8 801,134 - MPMX19_05266 0.37 -0.5 801,244 + MPMX19_05266 0.46 +0.3 801,245 - MPMX19_05266 0.46 +0.1 801,245 - MPMX19_05266 0.46 +0.1 801,652 + MPMX19_05266 0.81 -0.3
Or see this region's nucleotide sequence