Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_05193 and MPMX19_05194 are separated by 41 nucleotides MPMX19_05194 and MPMX19_05195 overlap by 4 nucleotides MPMX19_05195 and MPMX19_05196 are separated by 57 nucleotides MPMX19_05196 and MPMX19_05197 are separated by 51 nucleotides
MPMX19_05193: MPMX19_05193 - Taurine-binding periplasmic protein, at 696,163 to 697,179
_05193
MPMX19_05194: MPMX19_05194 - Taurine import ATP-binding protein TauB, at 697,221 to 698,024
_05194
MPMX19_05195: MPMX19_05195 - Putative aliphatic sulfonates transport permease protein SsuC, at 698,021 to 698,872
_05195
MPMX19_05196: MPMX19_05196 - Alpha-ketoglutarate-dependent taurine dioxygenase, at 698,930 to 699,781
_05196
MPMX19_05197: MPMX19_05197 - Inducible ornithine decarboxylase, at 699,833 to 702,193
_05197
Position (kb) 698
699 Strain fitness (log2 ratio) -2
-1
0
1
2 at 697.084 kb on - strand at 697.159 kb on + strand at 697.159 kb on + strand at 697.159 kb on + strand at 697.159 kb on + strand at 697.159 kb on + strand at 697.177 kb on + strand at 697.953 kb on + strand at 697.953 kb on + strand at 697.953 kb on + strand at 697.953 kb on + strand at 697.953 kb on + strand at 697.953 kb on + strand at 697.954 kb on - strand at 697.954 kb on - strand at 697.954 kb on - strand at 697.954 kb on - strand at 698.259 kb on - strand, within MPMX19_05195 at 698.259 kb on - strand, within MPMX19_05195 at 698.259 kb on - strand, within MPMX19_05195 at 698.436 kb on - strand, within MPMX19_05195 at 698.436 kb on - strand, within MPMX19_05195 at 698.436 kb on - strand, within MPMX19_05195 at 698.436 kb on - strand, within MPMX19_05195 at 698.436 kb on - strand, within MPMX19_05195 at 698.436 kb on - strand, within MPMX19_05195 at 698.436 kb on - strand, within MPMX19_05195 at 698.436 kb on - strand, within MPMX19_05195 at 698.907 kb on + strand at 698.908 kb on - strand at 698.908 kb on - strand at 698.908 kb on - strand at 698.908 kb on - strand at 699.072 kb on + strand, within MPMX19_05196 at 699.072 kb on + strand, within MPMX19_05196 at 699.072 kb on + strand, within MPMX19_05196 at 699.072 kb on + strand, within MPMX19_05196 at 699.073 kb on - strand, within MPMX19_05196 at 699.073 kb on - strand, within MPMX19_05196 at 699.073 kb on - strand, within MPMX19_05196 at 699.073 kb on - strand, within MPMX19_05196 at 699.073 kb on - strand, within MPMX19_05196 at 699.344 kb on + strand, within MPMX19_05196 at 699.344 kb on + strand, within MPMX19_05196 at 699.407 kb on - strand, within MPMX19_05196 at 699.617 kb on + strand, within MPMX19_05196 at 699.617 kb on + strand, within MPMX19_05196 at 699.618 kb on - strand, within MPMX19_05196 at 699.707 kb on + strand at 699.707 kb on + strand at 699.708 kb on - strand at 699.708 kb on - strand at 699.776 kb on + strand at 699.861 kb on + strand at 699.861 kb on + strand at 699.861 kb on + strand at 699.861 kb on + strand at 699.861 kb on + strand at 699.861 kb on + strand at 699.861 kb on + strand at 699.861 kb on + strand at 699.861 kb on + strand at 699.861 kb on + strand at 699.861 kb on + strand at 699.861 kb on + strand at 699.861 kb on + strand at 699.861 kb on + strand at 699.861 kb on + strand at 699.861 kb on + strand at 699.861 kb on + strand at 699.861 kb on + strand at 699.861 kb on + strand at 699.861 kb on + strand at 699.861 kb on + strand at 699.861 kb on + strand at 699.861 kb on + strand at 699.861 kb on + strand at 699.861 kb on + strand at 699.861 kb on + strand at 699.861 kb on + strand at 699.862 kb on - strand at 699.862 kb on - strand at 699.862 kb on - strand at 699.862 kb on - strand at 699.862 kb on - strand at 699.862 kb on - strand at 699.862 kb on - strand at 699.862 kb on - strand at 699.862 kb on - strand at 699.862 kb on - strand at 699.862 kb on - strand at 699.862 kb on - strand at 699.862 kb on - strand at 699.862 kb on - strand at 699.862 kb on - strand at 699.862 kb on - strand at 699.867 kb on + strand at 699.867 kb on + strand at 699.867 kb on + strand at 699.867 kb on + strand at 699.867 kb on + strand at 699.867 kb on + strand at 699.868 kb on - strand at 699.868 kb on - strand at 699.868 kb on - strand at 699.868 kb on - strand at 699.868 kb on - strand at 699.868 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 697,084 - -0.9 697,159 + -1.4 697,159 + +0.2 697,159 + +0.2 697,159 + -1.1 697,159 + -0.5 697,177 + +1.3 697,953 + -0.9 697,953 + -0.7 697,953 + -0.0 697,953 + +0.1 697,953 + -1.0 697,953 + -0.2 697,954 - -0.4 697,954 - +0.6 697,954 - -0.9 697,954 - -0.1 698,259 - MPMX19_05195 0.28 +0.1 698,259 - MPMX19_05195 0.28 -0.2 698,259 - MPMX19_05195 0.28 +0.1 698,436 - MPMX19_05195 0.49 +0.1 698,436 - MPMX19_05195 0.49 +0.3 698,436 - MPMX19_05195 0.49 +1.9 698,436 - MPMX19_05195 0.49 +0.8 698,436 - MPMX19_05195 0.49 +0.1 698,436 - MPMX19_05195 0.49 +0.4 698,436 - MPMX19_05195 0.49 -0.9 698,436 - MPMX19_05195 0.49 +0.9 698,907 + -0.3 698,908 - -0.9 698,908 - -1.4 698,908 - -1.5 698,908 - -0.1 699,072 + MPMX19_05196 0.17 -1.7 699,072 + MPMX19_05196 0.17 -0.4 699,072 + MPMX19_05196 0.17 -1.4 699,072 + MPMX19_05196 0.17 -0.3 699,073 - MPMX19_05196 0.17 -0.9 699,073 - MPMX19_05196 0.17 -1.6 699,073 - MPMX19_05196 0.17 +0.2 699,073 - MPMX19_05196 0.17 +0.4 699,073 - MPMX19_05196 0.17 -1.2 699,344 + MPMX19_05196 0.49 -0.2 699,344 + MPMX19_05196 0.49 -1.5 699,407 - MPMX19_05196 0.56 +0.4 699,617 + MPMX19_05196 0.81 -0.3 699,617 + MPMX19_05196 0.81 -1.0 699,618 - MPMX19_05196 0.81 +0.2 699,707 + -0.2 699,707 + +0.8 699,708 - -0.7 699,708 - +0.6 699,776 + -0.2 699,861 + +0.2 699,861 + +0.5 699,861 + -1.4 699,861 + -0.4 699,861 + -0.5 699,861 + +0.1 699,861 + -0.7 699,861 + -0.2 699,861 + +0.2 699,861 + -0.2 699,861 + -0.2 699,861 + +0.2 699,861 + -1.7 699,861 + -0.6 699,861 + -0.6 699,861 + -0.5 699,861 + -0.8 699,861 + -0.7 699,861 + -2.2 699,861 + -0.3 699,861 + -2.2 699,861 + +0.4 699,861 + +0.2 699,861 + +0.6 699,861 + -0.4 699,861 + +0.8 699,861 + -1.0 699,862 - +1.1 699,862 - -0.2 699,862 - -1.7 699,862 - -0.1 699,862 - +0.9 699,862 - +0.1 699,862 - -0.6 699,862 - -0.6 699,862 - -2.6 699,862 - +0.3 699,862 - -0.4 699,862 - -0.4 699,862 - +0.2 699,862 - -1.0 699,862 - +0.9 699,862 - -0.2 699,867 + -1.0 699,867 + +1.1 699,867 + -1.2 699,867 + +0.3 699,867 + +0.6 699,867 + +0.1 699,868 - -0.8 699,868 - +0.1 699,868 - -0.6 699,868 - -1.7 699,868 - -0.4 699,868 - -0.9
Or see this region's nucleotide sequence