Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_05172 and MPMX19_05173 are separated by 48 nucleotides MPMX19_05173 and MPMX19_05174 are separated by 46 nucleotides
MPMX19_05172: MPMX19_05172 - Vitamin B12 transporter BtuB, at 673,998 to 676,199
_05172
MPMX19_05173: MPMX19_05173 - hypothetical protein, at 676,248 to 677,225
_05173
MPMX19_05174: MPMX19_05174 - Putative acyl-CoA dehydrogenase YdbM, at 677,272 to 678,477
_05174
Position (kb)
676
677
678 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 675.264 kb on + strand, within MPMX19_05172 at 675.264 kb on + strand, within MPMX19_05172 at 675.265 kb on - strand, within MPMX19_05172 at 675.265 kb on - strand, within MPMX19_05172 at 675.388 kb on + strand, within MPMX19_05172 at 675.389 kb on - strand, within MPMX19_05172 at 675.397 kb on - strand, within MPMX19_05172 at 675.397 kb on - strand, within MPMX19_05172 at 675.432 kb on + strand, within MPMX19_05172 at 675.433 kb on - strand, within MPMX19_05172 at 675.462 kb on + strand, within MPMX19_05172 at 675.462 kb on + strand, within MPMX19_05172 at 675.462 kb on + strand, within MPMX19_05172 at 675.462 kb on + strand, within MPMX19_05172 at 675.463 kb on - strand, within MPMX19_05172 at 675.463 kb on - strand, within MPMX19_05172 at 675.463 kb on - strand, within MPMX19_05172 at 675.463 kb on - strand, within MPMX19_05172 at 675.463 kb on - strand, within MPMX19_05172 at 675.463 kb on - strand, within MPMX19_05172 at 675.463 kb on - strand, within MPMX19_05172 at 675.463 kb on - strand, within MPMX19_05172 at 675.472 kb on - strand, within MPMX19_05172 at 675.472 kb on - strand, within MPMX19_05172 at 675.534 kb on + strand, within MPMX19_05172 at 675.534 kb on + strand, within MPMX19_05172 at 675.534 kb on + strand, within MPMX19_05172 at 675.535 kb on - strand, within MPMX19_05172 at 675.535 kb on - strand, within MPMX19_05172 at 675.639 kb on + strand, within MPMX19_05172 at 675.639 kb on + strand, within MPMX19_05172 at 675.639 kb on + strand, within MPMX19_05172 at 675.639 kb on + strand, within MPMX19_05172 at 675.639 kb on + strand, within MPMX19_05172 at 675.639 kb on + strand, within MPMX19_05172 at 675.639 kb on + strand, within MPMX19_05172 at 675.639 kb on + strand, within MPMX19_05172 at 675.640 kb on - strand, within MPMX19_05172 at 675.640 kb on - strand, within MPMX19_05172 at 675.642 kb on + strand, within MPMX19_05172 at 675.642 kb on + strand, within MPMX19_05172 at 675.642 kb on + strand, within MPMX19_05172 at 675.642 kb on + strand, within MPMX19_05172 at 675.642 kb on + strand, within MPMX19_05172 at 675.642 kb on + strand, within MPMX19_05172 at 675.642 kb on + strand, within MPMX19_05172 at 675.642 kb on + strand, within MPMX19_05172 at 675.642 kb on + strand, within MPMX19_05172 at 675.642 kb on + strand, within MPMX19_05172 at 675.642 kb on + strand, within MPMX19_05172 at 675.642 kb on + strand, within MPMX19_05172 at 675.643 kb on - strand, within MPMX19_05172 at 675.643 kb on - strand, within MPMX19_05172 at 675.643 kb on - strand, within MPMX19_05172 at 675.643 kb on - strand, within MPMX19_05172 at 675.643 kb on - strand, within MPMX19_05172 at 675.643 kb on - strand, within MPMX19_05172 at 675.643 kb on - strand, within MPMX19_05172 at 675.643 kb on - strand, within MPMX19_05172 at 675.643 kb on - strand, within MPMX19_05172 at 675.648 kb on + strand, within MPMX19_05172 at 675.648 kb on + strand, within MPMX19_05172 at 675.648 kb on + strand, within MPMX19_05172 at 675.648 kb on + strand, within MPMX19_05172 at 675.648 kb on + strand, within MPMX19_05172 at 675.648 kb on + strand, within MPMX19_05172 at 675.648 kb on + strand, within MPMX19_05172 at 675.648 kb on + strand, within MPMX19_05172 at 675.648 kb on + strand, within MPMX19_05172 at 675.648 kb on + strand, within MPMX19_05172 at 675.648 kb on + strand, within MPMX19_05172 at 675.648 kb on + strand, within MPMX19_05172 at 675.648 kb on + strand, within MPMX19_05172 at 675.648 kb on + strand, within MPMX19_05172 at 675.648 kb on + strand, within MPMX19_05172 at 675.648 kb on + strand, within MPMX19_05172 at 675.648 kb on + strand, within MPMX19_05172 at 675.648 kb on + strand, within MPMX19_05172 at 675.648 kb on + strand, within MPMX19_05172 at 675.648 kb on + strand, within MPMX19_05172 at 675.648 kb on + strand, within MPMX19_05172 at 675.648 kb on + strand, within MPMX19_05172 at 675.648 kb on + strand, within MPMX19_05172 at 675.648 kb on + strand, within MPMX19_05172 at 675.648 kb on + strand, within MPMX19_05172 at 675.648 kb on + strand, within MPMX19_05172 at 675.649 kb on - strand, within MPMX19_05172 at 675.649 kb on - strand, within MPMX19_05172 at 675.649 kb on - strand, within MPMX19_05172 at 675.649 kb on - strand, within MPMX19_05172 at 675.649 kb on - strand, within MPMX19_05172 at 675.649 kb on - strand, within MPMX19_05172 at 675.649 kb on - strand, within MPMX19_05172 at 675.649 kb on - strand, within MPMX19_05172 at 675.649 kb on - strand, within MPMX19_05172 at 675.649 kb on - strand, within MPMX19_05172 at 675.649 kb on - strand, within MPMX19_05172 at 675.649 kb on - strand, within MPMX19_05172 at 675.649 kb on - strand, within MPMX19_05172 at 675.649 kb on - strand, within MPMX19_05172 at 675.649 kb on - strand, within MPMX19_05172 at 675.649 kb on - strand, within MPMX19_05172 at 675.649 kb on - strand, within MPMX19_05172 at 675.649 kb on - strand, within MPMX19_05172 at 675.649 kb on - strand, within MPMX19_05172 at 675.649 kb on - strand, within MPMX19_05172 at 675.771 kb on + strand, within MPMX19_05172 at 675.771 kb on + strand, within MPMX19_05172 at 675.771 kb on + strand, within MPMX19_05172 at 675.771 kb on + strand, within MPMX19_05172 at 675.771 kb on + strand, within MPMX19_05172 at 675.772 kb on - strand, within MPMX19_05172 at 675.772 kb on - strand, within MPMX19_05172 at 675.772 kb on - strand, within MPMX19_05172 at 675.858 kb on + strand, within MPMX19_05172 at 675.858 kb on + strand, within MPMX19_05172 at 675.858 kb on + strand, within MPMX19_05172 at 675.859 kb on - strand, within MPMX19_05172 at 675.859 kb on - strand, within MPMX19_05172 at 675.859 kb on - strand, within MPMX19_05172 at 675.859 kb on - strand, within MPMX19_05172 at 675.859 kb on - strand, within MPMX19_05172 at 675.859 kb on - strand, within MPMX19_05172 at 675.993 kb on + strand at 675.993 kb on + strand at 675.993 kb on + strand at 675.993 kb on + strand at 675.993 kb on + strand at 675.993 kb on + strand at 675.993 kb on + strand at 675.994 kb on - strand at 675.994 kb on - strand at 675.994 kb on - strand at 675.994 kb on - strand at 675.994 kb on - strand at 675.994 kb on - strand at 675.994 kb on - strand at 676.020 kb on + strand at 676.077 kb on + strand at 676.077 kb on + strand at 676.077 kb on + strand at 676.077 kb on + strand at 676.078 kb on - strand at 676.078 kb on - strand at 676.080 kb on + strand at 676.080 kb on + strand at 676.080 kb on + strand at 676.080 kb on + strand at 676.080 kb on + strand at 676.080 kb on + strand at 676.080 kb on + strand at 676.080 kb on + strand at 676.080 kb on + strand at 676.080 kb on + strand at 676.081 kb on - strand at 676.081 kb on - strand at 676.081 kb on - strand at 676.104 kb on + strand at 676.105 kb on - strand at 676.105 kb on - strand at 676.198 kb on - strand at 676.198 kb on - strand at 676.198 kb on - strand at 676.772 kb on + strand, within MPMX19_05173 at 676.772 kb on + strand, within MPMX19_05173 at 676.773 kb on - strand, within MPMX19_05173 at 676.849 kb on + strand, within MPMX19_05173 at 676.850 kb on - strand, within MPMX19_05173 at 676.950 kb on + strand, within MPMX19_05173 at 676.950 kb on + strand, within MPMX19_05173 at 676.950 kb on + strand, within MPMX19_05173 at 676.950 kb on + strand, within MPMX19_05173 at 676.951 kb on - strand, within MPMX19_05173 at 676.951 kb on - strand, within MPMX19_05173 at 676.990 kb on + strand, within MPMX19_05173 at 676.993 kb on - strand, within MPMX19_05173 at 677.069 kb on - strand, within MPMX19_05173 at 677.069 kb on - strand, within MPMX19_05173 at 677.212 kb on - strand at 677.453 kb on + strand, within MPMX19_05174 at 677.453 kb on + strand, within MPMX19_05174 at 677.454 kb on - strand, within MPMX19_05174 at 677.454 kb on - strand, within MPMX19_05174 at 677.454 kb on - strand, within MPMX19_05174 at 677.458 kb on + strand, within MPMX19_05174 at 677.459 kb on - strand, within MPMX19_05174 at 677.678 kb on + strand, within MPMX19_05174 at 677.972 kb on + strand, within MPMX19_05174 at 677.972 kb on + strand, within MPMX19_05174 at 677.973 kb on - strand, within MPMX19_05174 at 678.176 kb on + strand, within MPMX19_05174 at 678.176 kb on + strand, within MPMX19_05174 at 678.176 kb on + strand, within MPMX19_05174 at 678.176 kb on + strand, within MPMX19_05174 at 678.176 kb on + strand, within MPMX19_05174 at 678.176 kb on + strand, within MPMX19_05174 at 678.176 kb on + strand, within MPMX19_05174 at 678.176 kb on + strand, within MPMX19_05174 at 678.176 kb on + strand, within MPMX19_05174 at 678.176 kb on + strand, within MPMX19_05174 at 678.176 kb on + strand, within MPMX19_05174 at 678.176 kb on + strand, within MPMX19_05174 at 678.176 kb on + strand, within MPMX19_05174 at 678.176 kb on + strand, within MPMX19_05174 at 678.176 kb on + strand, within MPMX19_05174 at 678.176 kb on + strand, within MPMX19_05174 at 678.176 kb on + strand, within MPMX19_05174 at 678.177 kb on - strand, within MPMX19_05174 at 678.177 kb on - strand, within MPMX19_05174 at 678.177 kb on - strand, within MPMX19_05174 at 678.177 kb on - strand, within MPMX19_05174 at 678.177 kb on - strand, within MPMX19_05174 at 678.177 kb on - strand, within MPMX19_05174 at 678.177 kb on - strand, within MPMX19_05174 at 678.177 kb on - strand, within MPMX19_05174 at 678.177 kb on - strand, within MPMX19_05174 at 678.177 kb on - strand, within MPMX19_05174 at 678.177 kb on - strand, within MPMX19_05174 at 678.177 kb on - strand, within MPMX19_05174 at 678.177 kb on - strand, within MPMX19_05174 at 678.177 kb on - strand, within MPMX19_05174 at 678.177 kb on - strand, within MPMX19_05174 at 678.177 kb on - strand, within MPMX19_05174 at 678.177 kb on - strand, within MPMX19_05174 at 678.177 kb on - strand, within MPMX19_05174 at 678.177 kb on - strand, within MPMX19_05174 at 678.177 kb on - strand, within MPMX19_05174 at 678.177 kb on - strand, within MPMX19_05174 at 678.177 kb on - strand, within MPMX19_05174 at 678.177 kb on - strand, within MPMX19_05174 at 678.177 kb on - strand, within MPMX19_05174 at 678.177 kb on - strand, within MPMX19_05174
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 675,264 + MPMX19_05172 0.57 -0.2 675,264 + MPMX19_05172 0.57 -1.4 675,265 - MPMX19_05172 0.58 +0.0 675,265 - MPMX19_05172 0.58 -0.4 675,388 + MPMX19_05172 0.63 -0.7 675,389 - MPMX19_05172 0.63 -0.1 675,397 - MPMX19_05172 0.64 +0.9 675,397 - MPMX19_05172 0.64 -0.6 675,432 + MPMX19_05172 0.65 -2.1 675,433 - MPMX19_05172 0.65 -2.9 675,462 + MPMX19_05172 0.66 +0.4 675,462 + MPMX19_05172 0.66 -1.4 675,462 + MPMX19_05172 0.66 -0.7 675,462 + MPMX19_05172 0.66 +0.3 675,463 - MPMX19_05172 0.67 -0.3 675,463 - MPMX19_05172 0.67 +0.2 675,463 - MPMX19_05172 0.67 -0.6 675,463 - MPMX19_05172 0.67 -0.2 675,463 - MPMX19_05172 0.67 +0.3 675,463 - MPMX19_05172 0.67 -3.0 675,463 - MPMX19_05172 0.67 -0.4 675,463 - MPMX19_05172 0.67 -0.4 675,472 - MPMX19_05172 0.67 -0.3 675,472 - MPMX19_05172 0.67 -1.6 675,534 + MPMX19_05172 0.70 -1.4 675,534 + MPMX19_05172 0.70 -0.9 675,534 + MPMX19_05172 0.70 -1.8 675,535 - MPMX19_05172 0.70 +0.6 675,535 - MPMX19_05172 0.70 +0.6 675,639 + MPMX19_05172 0.75 -1.7 675,639 + MPMX19_05172 0.75 +0.3 675,639 + MPMX19_05172 0.75 +0.9 675,639 + MPMX19_05172 0.75 -1.5 675,639 + MPMX19_05172 0.75 +2.0 675,639 + MPMX19_05172 0.75 -0.9 675,639 + MPMX19_05172 0.75 +1.2 675,639 + MPMX19_05172 0.75 +0.9 675,640 - MPMX19_05172 0.75 +2.0 675,640 - MPMX19_05172 0.75 -0.6 675,642 + MPMX19_05172 0.75 -1.4 675,642 + MPMX19_05172 0.75 +0.6 675,642 + MPMX19_05172 0.75 +0.4 675,642 + MPMX19_05172 0.75 +0.3 675,642 + MPMX19_05172 0.75 +0.3 675,642 + MPMX19_05172 0.75 -0.7 675,642 + MPMX19_05172 0.75 -0.3 675,642 + MPMX19_05172 0.75 -1.4 675,642 + MPMX19_05172 0.75 -1.5 675,642 + MPMX19_05172 0.75 -0.2 675,642 + MPMX19_05172 0.75 +0.5 675,642 + MPMX19_05172 0.75 +0.6 675,643 - MPMX19_05172 0.75 +0.2 675,643 - MPMX19_05172 0.75 +1.3 675,643 - MPMX19_05172 0.75 -0.9 675,643 - MPMX19_05172 0.75 -0.4 675,643 - MPMX19_05172 0.75 +1.0 675,643 - MPMX19_05172 0.75 +0.3 675,643 - MPMX19_05172 0.75 -0.4 675,643 - MPMX19_05172 0.75 -0.9 675,643 - MPMX19_05172 0.75 +0.6 675,648 + MPMX19_05172 0.75 -0.2 675,648 + MPMX19_05172 0.75 -2.1 675,648 + MPMX19_05172 0.75 +1.0 675,648 + MPMX19_05172 0.75 -1.0 675,648 + MPMX19_05172 0.75 -1.5 675,648 + MPMX19_05172 0.75 -0.1 675,648 + MPMX19_05172 0.75 +0.3 675,648 + MPMX19_05172 0.75 -0.2 675,648 + MPMX19_05172 0.75 -0.3 675,648 + MPMX19_05172 0.75 -0.8 675,648 + MPMX19_05172 0.75 +0.7 675,648 + MPMX19_05172 0.75 -2.1 675,648 + MPMX19_05172 0.75 -0.9 675,648 + MPMX19_05172 0.75 -1.3 675,648 + MPMX19_05172 0.75 +1.3 675,648 + MPMX19_05172 0.75 +1.3 675,648 + MPMX19_05172 0.75 -0.2 675,648 + MPMX19_05172 0.75 -0.2 675,648 + MPMX19_05172 0.75 +0.1 675,648 + MPMX19_05172 0.75 -1.2 675,648 + MPMX19_05172 0.75 +0.2 675,648 + MPMX19_05172 0.75 -2.2 675,648 + MPMX19_05172 0.75 -0.7 675,648 + MPMX19_05172 0.75 -0.4 675,648 + MPMX19_05172 0.75 -0.4 675,648 + MPMX19_05172 0.75 -0.1 675,649 - MPMX19_05172 0.75 +0.1 675,649 - MPMX19_05172 0.75 -0.1 675,649 - MPMX19_05172 0.75 +0.3 675,649 - MPMX19_05172 0.75 -0.9 675,649 - MPMX19_05172 0.75 +0.4 675,649 - MPMX19_05172 0.75 -1.4 675,649 - MPMX19_05172 0.75 -1.0 675,649 - MPMX19_05172 0.75 -1.7 675,649 - MPMX19_05172 0.75 -0.2 675,649 - MPMX19_05172 0.75 +0.5 675,649 - MPMX19_05172 0.75 +0.3 675,649 - MPMX19_05172 0.75 +0.8 675,649 - MPMX19_05172 0.75 -0.8 675,649 - MPMX19_05172 0.75 +0.1 675,649 - MPMX19_05172 0.75 -0.0 675,649 - MPMX19_05172 0.75 -0.2 675,649 - MPMX19_05172 0.75 +0.5 675,649 - MPMX19_05172 0.75 -1.5 675,649 - MPMX19_05172 0.75 +2.2 675,649 - MPMX19_05172 0.75 -0.4 675,771 + MPMX19_05172 0.81 -0.4 675,771 + MPMX19_05172 0.81 -1.9 675,771 + MPMX19_05172 0.81 -2.3 675,771 + MPMX19_05172 0.81 +0.7 675,771 + MPMX19_05172 0.81 -1.4 675,772 - MPMX19_05172 0.81 +1.1 675,772 - MPMX19_05172 0.81 -1.1 675,772 - MPMX19_05172 0.81 -0.4 675,858 + MPMX19_05172 0.84 +1.4 675,858 + MPMX19_05172 0.84 -0.5 675,858 + MPMX19_05172 0.84 +0.4 675,859 - MPMX19_05172 0.85 -0.5 675,859 - MPMX19_05172 0.85 +0.2 675,859 - MPMX19_05172 0.85 -1.2 675,859 - MPMX19_05172 0.85 -0.3 675,859 - MPMX19_05172 0.85 +0.1 675,859 - MPMX19_05172 0.85 +1.0 675,993 + -0.2 675,993 + -0.6 675,993 + +0.4 675,993 + +0.5 675,993 + -0.4 675,993 + -0.6 675,993 + -0.4 675,994 - -0.9 675,994 - -1.5 675,994 - -0.2 675,994 - -0.9 675,994 - +2.1 675,994 - +0.2 675,994 - -2.2 676,020 + +0.6 676,077 + +1.0 676,077 + -0.7 676,077 + +1.6 676,077 + -0.5 676,078 - -0.9 676,078 - +1.3 676,080 + +0.1 676,080 + +0.6 676,080 + -0.4 676,080 + -1.7 676,080 + +0.5 676,080 + +0.5 676,080 + -1.4 676,080 + +1.0 676,080 + -0.1 676,080 + +0.1 676,081 - +1.6 676,081 - -1.4 676,081 - -0.9 676,104 + +0.6 676,105 - +0.1 676,105 - -0.6 676,198 - +1.2 676,198 - -0.6 676,198 - -0.1 676,772 + MPMX19_05173 0.54 -0.8 676,772 + MPMX19_05173 0.54 +0.2 676,773 - MPMX19_05173 0.54 -0.8 676,849 + MPMX19_05173 0.61 -0.4 676,850 - MPMX19_05173 0.62 -1.7 676,950 + MPMX19_05173 0.72 -0.5 676,950 + MPMX19_05173 0.72 +0.4 676,950 + MPMX19_05173 0.72 -0.9 676,950 + MPMX19_05173 0.72 -1.5 676,951 - MPMX19_05173 0.72 -0.0 676,951 - MPMX19_05173 0.72 -0.9 676,990 + MPMX19_05173 0.76 -1.8 676,993 - MPMX19_05173 0.76 -1.9 677,069 - MPMX19_05173 0.84 -0.4 677,069 - MPMX19_05173 0.84 -0.9 677,212 - -0.2 677,453 + MPMX19_05174 0.15 -1.4 677,453 + MPMX19_05174 0.15 +1.7 677,454 - MPMX19_05174 0.15 -0.4 677,454 - MPMX19_05174 0.15 -0.8 677,454 - MPMX19_05174 0.15 +0.8 677,458 + MPMX19_05174 0.15 +0.2 677,459 - MPMX19_05174 0.16 -0.7 677,678 + MPMX19_05174 0.34 +0.3 677,972 + MPMX19_05174 0.58 -1.8 677,972 + MPMX19_05174 0.58 +1.2 677,973 - MPMX19_05174 0.58 +0.6 678,176 + MPMX19_05174 0.75 -0.2 678,176 + MPMX19_05174 0.75 -0.7 678,176 + MPMX19_05174 0.75 -1.3 678,176 + MPMX19_05174 0.75 -0.8 678,176 + MPMX19_05174 0.75 -0.8 678,176 + MPMX19_05174 0.75 +0.8 678,176 + MPMX19_05174 0.75 -0.8 678,176 + MPMX19_05174 0.75 +0.6 678,176 + MPMX19_05174 0.75 -2.4 678,176 + MPMX19_05174 0.75 -1.3 678,176 + MPMX19_05174 0.75 -0.3 678,176 + MPMX19_05174 0.75 +0.5 678,176 + MPMX19_05174 0.75 -1.2 678,176 + MPMX19_05174 0.75 -1.5 678,176 + MPMX19_05174 0.75 +1.2 678,176 + MPMX19_05174 0.75 -0.0 678,176 + MPMX19_05174 0.75 +0.6 678,177 - MPMX19_05174 0.75 -2.4 678,177 - MPMX19_05174 0.75 -1.3 678,177 - MPMX19_05174 0.75 +1.4 678,177 - MPMX19_05174 0.75 -0.1 678,177 - MPMX19_05174 0.75 -0.7 678,177 - MPMX19_05174 0.75 -0.7 678,177 - MPMX19_05174 0.75 -0.2 678,177 - MPMX19_05174 0.75 +0.3 678,177 - MPMX19_05174 0.75 -0.3 678,177 - MPMX19_05174 0.75 +0.3 678,177 - MPMX19_05174 0.75 +0.5 678,177 - MPMX19_05174 0.75 +0.8 678,177 - MPMX19_05174 0.75 -0.8 678,177 - MPMX19_05174 0.75 -1.7 678,177 - MPMX19_05174 0.75 -0.4 678,177 - MPMX19_05174 0.75 -0.7 678,177 - MPMX19_05174 0.75 +0.1 678,177 - MPMX19_05174 0.75 +0.4 678,177 - MPMX19_05174 0.75 -0.4 678,177 - MPMX19_05174 0.75 -0.9 678,177 - MPMX19_05174 0.75 -1.2 678,177 - MPMX19_05174 0.75 +0.1 678,177 - MPMX19_05174 0.75 +2.2 678,177 - MPMX19_05174 0.75 -0.9 678,177 - MPMX19_05174 0.75 -0.9
Or see this region's nucleotide sequence