Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_05143 and MPMX19_05144 are separated by 182 nucleotides
MPMX19_05143: MPMX19_05143 - hypothetical protein, at 638,347 to 638,565
_05143
MPMX19_05144: MPMX19_05144 - hypothetical protein, at 638,748 to 638,882
_05144
Position (kb) 638
639 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 637.790 kb on + strand at 637.790 kb on + strand at 637.791 kb on - strand at 637.791 kb on - strand at 637.791 kb on - strand at 637.791 kb on - strand at 637.803 kb on + strand at 637.803 kb on + strand at 637.803 kb on + strand at 637.804 kb on - strand at 637.804 kb on - strand at 637.804 kb on - strand at 637.804 kb on - strand at 638.064 kb on + strand at 638.064 kb on + strand at 638.065 kb on - strand at 638.065 kb on - strand at 638.140 kb on + strand at 638.140 kb on + strand at 638.140 kb on + strand at 638.217 kb on + strand at 638.218 kb on - strand at 638.218 kb on - strand at 638.269 kb on - strand at 638.281 kb on + strand at 638.281 kb on + strand at 638.281 kb on + strand at 638.281 kb on + strand at 638.281 kb on + strand at 638.281 kb on + strand at 638.281 kb on + strand at 638.282 kb on - strand at 638.285 kb on + strand at 638.285 kb on + strand at 638.285 kb on + strand at 638.285 kb on + strand at 638.285 kb on + strand at 638.285 kb on + strand at 638.285 kb on + strand at 638.285 kb on + strand at 638.286 kb on - strand at 638.286 kb on - strand at 638.286 kb on - strand at 638.286 kb on - strand at 638.286 kb on - strand at 638.286 kb on - strand at 638.337 kb on + strand at 638.346 kb on + strand at 638.346 kb on + strand at 638.346 kb on + strand at 638.346 kb on + strand at 638.347 kb on - strand at 638.347 kb on - strand at 638.361 kb on + strand at 638.361 kb on + strand at 638.361 kb on + strand at 638.361 kb on + strand at 638.362 kb on - strand at 638.362 kb on - strand at 638.362 kb on - strand at 638.491 kb on + strand, within MPMX19_05143 at 638.491 kb on + strand, within MPMX19_05143 at 638.492 kb on - strand, within MPMX19_05143 at 638.563 kb on + strand at 638.611 kb on + strand at 638.611 kb on + strand at 638.791 kb on + strand, within MPMX19_05144 at 638.792 kb on - strand, within MPMX19_05144 at 638.792 kb on - strand, within MPMX19_05144 at 638.897 kb on + strand at 638.897 kb on + strand at 638.897 kb on + strand at 638.898 kb on - strand at 638.898 kb on - strand at 638.898 kb on - strand at 638.956 kb on + strand at 638.956 kb on + strand at 638.976 kb on + strand at 638.976 kb on + strand at 638.976 kb on + strand at 638.977 kb on - strand at 638.977 kb on - strand at 638.977 kb on - strand at 638.981 kb on - strand at 638.981 kb on - strand at 639.006 kb on + strand at 639.006 kb on + strand at 639.007 kb on - strand at 639.007 kb on - strand at 639.007 kb on - strand at 639.007 kb on - strand at 639.007 kb on - strand at 639.041 kb on + strand at 639.041 kb on + strand at 639.041 kb on + strand at 639.041 kb on + strand at 639.041 kb on + strand at 639.041 kb on - strand at 639.042 kb on - strand at 639.042 kb on - strand at 639.042 kb on - strand at 639.042 kb on - strand at 639.074 kb on + strand at 639.074 kb on + strand at 639.074 kb on + strand at 639.074 kb on + strand at 639.075 kb on - strand at 639.075 kb on - strand at 639.094 kb on + strand at 639.094 kb on + strand at 639.095 kb on - strand at 639.095 kb on - strand at 639.095 kb on - strand at 639.095 kb on - strand at 639.144 kb on + strand at 639.144 kb on + strand at 639.144 kb on + strand at 639.144 kb on + strand at 639.144 kb on + strand at 639.144 kb on + strand at 639.144 kb on + strand at 639.144 kb on + strand at 639.144 kb on + strand at 639.144 kb on + strand at 639.145 kb on - strand at 639.145 kb on - strand at 639.145 kb on - strand at 639.145 kb on - strand at 639.145 kb on - strand at 639.165 kb on + strand at 639.165 kb on + strand at 639.166 kb on - strand at 639.166 kb on - strand at 639.176 kb on + strand at 639.176 kb on + strand at 639.177 kb on - strand at 639.177 kb on - strand at 639.177 kb on - strand at 639.177 kb on - strand at 639.177 kb on - strand at 639.258 kb on + strand at 639.423 kb on + strand at 639.423 kb on + strand at 639.423 kb on + strand at 639.423 kb on + strand at 639.423 kb on + strand at 639.423 kb on + strand at 639.423 kb on + strand at 639.423 kb on + strand at 639.423 kb on + strand at 639.423 kb on + strand at 639.423 kb on + strand at 639.423 kb on + strand at 639.424 kb on - strand at 639.424 kb on - strand at 639.424 kb on - strand at 639.424 kb on - strand at 639.424 kb on - strand at 639.424 kb on - strand at 639.424 kb on - strand at 639.427 kb on + strand at 639.427 kb on + strand at 639.428 kb on - strand at 639.428 kb on - strand at 639.428 kb on - strand at 639.428 kb on - strand at 639.428 kb on - strand at 639.428 kb on - strand at 639.590 kb on + strand at 639.590 kb on + strand at 639.590 kb on + strand at 639.590 kb on + strand at 639.590 kb on + strand at 639.591 kb on - strand at 639.591 kb on - strand at 639.591 kb on - strand at 639.591 kb on - strand at 639.591 kb on - strand at 639.591 kb on - strand at 639.594 kb on + strand at 639.594 kb on + strand at 639.595 kb on - strand at 639.595 kb on - strand at 639.595 kb on - strand at 639.595 kb on - strand at 639.780 kb on - strand at 639.780 kb on - strand at 639.780 kb on - strand at 639.780 kb on - strand at 639.811 kb on + strand at 639.811 kb on + strand at 639.812 kb on - strand at 639.834 kb on + strand at 639.834 kb on + strand at 639.834 kb on + strand at 639.834 kb on + strand at 639.834 kb on + strand at 639.835 kb on - strand at 639.835 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 637,790 + -1.5 637,790 + -0.8 637,791 - -0.7 637,791 - +0.9 637,791 - -0.9 637,791 - -0.1 637,803 + -0.5 637,803 + -0.7 637,803 + +0.3 637,804 - -0.2 637,804 - +1.2 637,804 - -0.4 637,804 - -1.0 638,064 + -2.0 638,064 + -0.7 638,065 - -1.1 638,065 - -1.2 638,140 + -1.3 638,140 + -0.4 638,140 + -1.9 638,217 + +1.6 638,218 - -0.9 638,218 - -1.5 638,269 - +0.4 638,281 + -0.8 638,281 + -1.9 638,281 + -1.4 638,281 + -1.2 638,281 + +0.1 638,281 + -0.9 638,281 + +0.2 638,282 - -2.2 638,285 + -0.4 638,285 + -0.5 638,285 + -0.9 638,285 + -0.6 638,285 + -1.9 638,285 + -1.2 638,285 + -1.1 638,285 + -1.8 638,286 - -0.7 638,286 - -0.9 638,286 - +0.3 638,286 - +0.1 638,286 - -1.4 638,286 - -0.6 638,337 + +0.8 638,346 + -1.2 638,346 + -0.1 638,346 + -1.5 638,346 + -1.4 638,347 - -0.4 638,347 - -0.7 638,361 + -0.4 638,361 + +0.6 638,361 + -1.2 638,361 + -1.7 638,362 - -0.4 638,362 - -1.5 638,362 - -0.1 638,491 + MPMX19_05143 0.66 -0.5 638,491 + MPMX19_05143 0.66 -0.7 638,492 - MPMX19_05143 0.66 -0.6 638,563 + +0.1 638,611 + -1.0 638,611 + +1.2 638,791 + MPMX19_05144 0.32 -0.9 638,792 - MPMX19_05144 0.33 -1.4 638,792 - MPMX19_05144 0.33 -0.9 638,897 + +1.3 638,897 + -0.2 638,897 + -0.6 638,898 - +0.2 638,898 - -2.8 638,898 - -1.2 638,956 + -0.8 638,956 + -0.2 638,976 + +0.7 638,976 + -0.6 638,976 + -0.7 638,977 - -0.7 638,977 - -0.4 638,977 - -0.2 638,981 - -0.7 638,981 - -1.1 639,006 + -1.9 639,006 + +1.6 639,007 - +0.2 639,007 - -0.2 639,007 - -0.9 639,007 - -0.4 639,007 - -0.5 639,041 + +0.3 639,041 + -1.4 639,041 + -0.5 639,041 + +0.2 639,041 + -0.5 639,041 - -1.4 639,042 - -0.5 639,042 - +0.1 639,042 - -0.0 639,042 - +0.2 639,074 + -1.4 639,074 + -1.2 639,074 + -0.9 639,074 + -1.4 639,075 - -1.4 639,075 - -0.9 639,094 + -1.4 639,094 + -0.2 639,095 - -1.8 639,095 - +0.2 639,095 - -0.2 639,095 - -0.2 639,144 + +0.5 639,144 + -1.9 639,144 + -0.4 639,144 + -0.5 639,144 + -1.2 639,144 + +0.1 639,144 + -0.8 639,144 + -0.6 639,144 + -0.4 639,144 + -1.0 639,145 - -0.8 639,145 - -0.1 639,145 - +0.6 639,145 - -0.7 639,145 - +0.2 639,165 + +0.1 639,165 + -2.2 639,166 - -0.9 639,166 - -1.8 639,176 + +0.2 639,176 + -0.2 639,177 - -1.4 639,177 - -0.7 639,177 - -0.5 639,177 - -0.5 639,177 - -1.2 639,258 + +0.6 639,423 + +0.4 639,423 + +0.2 639,423 + -1.0 639,423 + -1.5 639,423 + -1.7 639,423 + -1.1 639,423 + -0.1 639,423 + +0.2 639,423 + -1.8 639,423 + -0.5 639,423 + -0.0 639,423 + +0.1 639,424 - +0.3 639,424 - +0.4 639,424 - -1.6 639,424 - +0.1 639,424 - -0.4 639,424 - -0.0 639,424 - -0.0 639,427 + +0.1 639,427 + -0.4 639,428 - -0.9 639,428 - -2.2 639,428 - +0.6 639,428 - -0.1 639,428 - -0.1 639,428 - -0.3 639,590 + -0.8 639,590 + +0.6 639,590 + -0.7 639,590 + -0.9 639,590 + -1.8 639,591 - -2.1 639,591 - -2.6 639,591 - -0.9 639,591 - -0.7 639,591 - +0.2 639,591 - -0.2 639,594 + +0.3 639,594 + +0.1 639,595 - -0.8 639,595 - +0.9 639,595 - +0.2 639,595 - -0.3 639,780 - -0.1 639,780 - -0.7 639,780 - -0.7 639,780 - -1.1 639,811 + -2.7 639,811 + +0.5 639,812 - +0.9 639,834 + +0.8 639,834 + -0.7 639,834 + -0.1 639,834 + +0.3 639,834 + +0.1 639,835 - -1.4 639,835 - +0.6
Or see this region's nucleotide sequence