Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_05041 and MPMX19_05042 are separated by 204 nucleotides MPMX19_05042 and MPMX19_05043 are separated by 77 nucleotides MPMX19_05043 and MPMX19_05044 overlap by 4 nucleotides MPMX19_05044 and MPMX19_05045 are separated by 78 nucleotides
MPMX19_05041: MPMX19_05041 - 1,3,6,8-tetrahydroxynaphthalene synthase, at 525,702 to 526,760
_05041
MPMX19_05042: MPMX19_05042 - hypothetical protein, at 526,965 to 527,513
_05042
MPMX19_05043: MPMX19_05043 - hypothetical protein, at 527,591 to 528,196
_05043
MPMX19_05044: MPMX19_05044 - hypothetical protein, at 528,193 to 529,026
_05044
MPMX19_05045: MPMX19_05045 - Succinate-semialdehyde dehydrogenase [NADP(+)], at 529,105 to 530,598
_05045
Position (kb) 527
528
529 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 526.704 kb on + strand at 526.704 kb on + strand at 526.704 kb on + strand at 526.704 kb on + strand at 526.705 kb on - strand at 526.845 kb on + strand at 526.845 kb on + strand at 526.845 kb on + strand at 526.845 kb on + strand at 526.846 kb on - strand at 526.876 kb on + strand at 526.977 kb on + strand at 526.978 kb on - strand at 527.109 kb on + strand, within MPMX19_05042 at 527.109 kb on + strand, within MPMX19_05042 at 527.109 kb on + strand, within MPMX19_05042 at 527.109 kb on + strand, within MPMX19_05042 at 527.109 kb on + strand, within MPMX19_05042 at 527.109 kb on + strand, within MPMX19_05042 at 527.110 kb on - strand, within MPMX19_05042 at 527.110 kb on - strand, within MPMX19_05042 at 527.110 kb on - strand, within MPMX19_05042 at 527.110 kb on - strand, within MPMX19_05042 at 527.110 kb on - strand, within MPMX19_05042 at 527.110 kb on - strand, within MPMX19_05042 at 527.110 kb on - strand, within MPMX19_05042 at 527.110 kb on - strand, within MPMX19_05042 at 527.110 kb on - strand, within MPMX19_05042 at 527.110 kb on - strand, within MPMX19_05042 at 527.110 kb on - strand, within MPMX19_05042 at 527.110 kb on - strand, within MPMX19_05042 at 527.178 kb on + strand, within MPMX19_05042 at 527.178 kb on + strand, within MPMX19_05042 at 527.178 kb on + strand, within MPMX19_05042 at 527.178 kb on + strand, within MPMX19_05042 at 527.178 kb on + strand, within MPMX19_05042 at 527.179 kb on - strand, within MPMX19_05042 at 527.179 kb on - strand, within MPMX19_05042 at 527.179 kb on - strand, within MPMX19_05042 at 527.179 kb on - strand, within MPMX19_05042 at 527.184 kb on + strand, within MPMX19_05042 at 527.184 kb on + strand, within MPMX19_05042 at 527.185 kb on - strand, within MPMX19_05042 at 527.185 kb on - strand, within MPMX19_05042 at 527.209 kb on - strand, within MPMX19_05042 at 527.209 kb on - strand, within MPMX19_05042 at 527.271 kb on + strand, within MPMX19_05042 at 527.271 kb on + strand, within MPMX19_05042 at 527.280 kb on + strand, within MPMX19_05042 at 527.281 kb on - strand, within MPMX19_05042 at 527.322 kb on + strand, within MPMX19_05042 at 527.322 kb on + strand, within MPMX19_05042 at 527.322 kb on + strand, within MPMX19_05042 at 527.323 kb on - strand, within MPMX19_05042 at 527.323 kb on - strand, within MPMX19_05042 at 527.323 kb on - strand, within MPMX19_05042 at 527.323 kb on - strand, within MPMX19_05042 at 527.325 kb on + strand, within MPMX19_05042 at 527.325 kb on + strand, within MPMX19_05042 at 527.325 kb on + strand, within MPMX19_05042 at 527.325 kb on + strand, within MPMX19_05042 at 527.326 kb on - strand, within MPMX19_05042 at 527.326 kb on - strand, within MPMX19_05042 at 527.326 kb on - strand, within MPMX19_05042 at 527.326 kb on - strand, within MPMX19_05042 at 527.326 kb on - strand, within MPMX19_05042 at 527.326 kb on - strand, within MPMX19_05042 at 527.355 kb on + strand, within MPMX19_05042 at 527.355 kb on + strand, within MPMX19_05042 at 527.355 kb on + strand, within MPMX19_05042 at 527.355 kb on + strand, within MPMX19_05042 at 527.373 kb on + strand, within MPMX19_05042 at 527.373 kb on + strand, within MPMX19_05042 at 527.374 kb on - strand, within MPMX19_05042 at 527.374 kb on - strand, within MPMX19_05042 at 527.388 kb on + strand, within MPMX19_05042 at 527.388 kb on + strand, within MPMX19_05042 at 527.388 kb on + strand, within MPMX19_05042 at 527.388 kb on + strand, within MPMX19_05042 at 527.388 kb on + strand, within MPMX19_05042 at 527.388 kb on + strand, within MPMX19_05042 at 527.388 kb on + strand, within MPMX19_05042 at 527.388 kb on + strand, within MPMX19_05042 at 527.388 kb on + strand, within MPMX19_05042 at 527.388 kb on + strand, within MPMX19_05042 at 527.388 kb on + strand, within MPMX19_05042 at 527.388 kb on + strand, within MPMX19_05042 at 527.388 kb on + strand, within MPMX19_05042 at 527.388 kb on + strand, within MPMX19_05042 at 527.388 kb on + strand, within MPMX19_05042 at 527.388 kb on + strand, within MPMX19_05042 at 527.388 kb on + strand, within MPMX19_05042 at 527.388 kb on + strand, within MPMX19_05042 at 527.388 kb on + strand, within MPMX19_05042 at 527.388 kb on + strand, within MPMX19_05042 at 527.388 kb on + strand, within MPMX19_05042 at 527.388 kb on + strand, within MPMX19_05042 at 527.389 kb on - strand, within MPMX19_05042 at 527.389 kb on - strand, within MPMX19_05042 at 527.389 kb on - strand, within MPMX19_05042 at 527.389 kb on - strand, within MPMX19_05042 at 527.389 kb on - strand, within MPMX19_05042 at 527.389 kb on - strand, within MPMX19_05042 at 527.389 kb on - strand, within MPMX19_05042 at 527.389 kb on - strand, within MPMX19_05042 at 527.389 kb on - strand, within MPMX19_05042 at 527.389 kb on - strand, within MPMX19_05042 at 527.389 kb on - strand, within MPMX19_05042 at 527.389 kb on - strand, within MPMX19_05042 at 527.389 kb on - strand, within MPMX19_05042 at 527.389 kb on - strand, within MPMX19_05042 at 527.389 kb on - strand, within MPMX19_05042 at 527.389 kb on - strand, within MPMX19_05042 at 527.389 kb on - strand, within MPMX19_05042 at 527.389 kb on - strand, within MPMX19_05042 at 527.389 kb on - strand, within MPMX19_05042 at 527.389 kb on - strand, within MPMX19_05042 at 527.389 kb on - strand, within MPMX19_05042 at 527.389 kb on - strand, within MPMX19_05042 at 527.389 kb on - strand, within MPMX19_05042 at 527.389 kb on - strand, within MPMX19_05042 at 527.389 kb on - strand, within MPMX19_05042 at 527.469 kb on + strand at 527.469 kb on + strand at 527.469 kb on + strand at 527.469 kb on + strand at 527.470 kb on - strand at 527.470 kb on - strand at 527.596 kb on + strand at 527.621 kb on + strand at 527.621 kb on + strand at 527.621 kb on + strand at 527.621 kb on + strand at 527.621 kb on + strand at 527.621 kb on + strand at 527.621 kb on + strand at 527.621 kb on + strand at 527.621 kb on + strand at 527.621 kb on + strand at 527.621 kb on + strand at 527.621 kb on + strand at 527.621 kb on + strand at 527.621 kb on + strand at 527.621 kb on + strand at 527.621 kb on + strand at 527.621 kb on + strand at 527.621 kb on + strand at 527.622 kb on - strand at 527.622 kb on - strand at 527.622 kb on - strand at 527.622 kb on - strand at 527.622 kb on - strand at 527.622 kb on - strand at 527.622 kb on - strand at 527.622 kb on - strand at 527.622 kb on - strand at 527.622 kb on - strand at 527.622 kb on - strand at 527.622 kb on - strand at 527.622 kb on - strand at 527.622 kb on - strand at 527.622 kb on - strand at 527.622 kb on - strand at 527.622 kb on - strand at 527.622 kb on - strand at 527.622 kb on - strand at 527.622 kb on - strand at 527.622 kb on - strand at 527.622 kb on - strand at 527.622 kb on - strand at 527.622 kb on - strand at 527.622 kb on - strand at 527.622 kb on - strand at 527.622 kb on - strand at 527.641 kb on - strand at 527.641 kb on - strand at 527.753 kb on + strand, within MPMX19_05043 at 527.754 kb on - strand, within MPMX19_05043 at 528.068 kb on + strand, within MPMX19_05043 at 528.068 kb on + strand, within MPMX19_05043 at 528.068 kb on + strand, within MPMX19_05043 at 528.068 kb on + strand, within MPMX19_05043 at 528.068 kb on + strand, within MPMX19_05043 at 528.068 kb on + strand, within MPMX19_05043 at 528.068 kb on + strand, within MPMX19_05043 at 528.068 kb on + strand, within MPMX19_05043 at 528.068 kb on + strand, within MPMX19_05043 at 528.068 kb on + strand, within MPMX19_05043 at 528.069 kb on - strand, within MPMX19_05043 at 528.069 kb on - strand, within MPMX19_05043 at 528.069 kb on - strand, within MPMX19_05043 at 528.069 kb on - strand, within MPMX19_05043 at 528.069 kb on - strand, within MPMX19_05043 at 528.069 kb on - strand, within MPMX19_05043 at 528.069 kb on - strand, within MPMX19_05043 at 528.069 kb on - strand, within MPMX19_05043 at 528.086 kb on + strand, within MPMX19_05043 at 528.087 kb on - strand, within MPMX19_05043 at 528.087 kb on - strand, within MPMX19_05043 at 528.631 kb on + strand, within MPMX19_05044 at 528.631 kb on + strand, within MPMX19_05044 at 528.631 kb on + strand, within MPMX19_05044 at 528.631 kb on + strand, within MPMX19_05044 at 528.631 kb on + strand, within MPMX19_05044 at 528.632 kb on - strand, within MPMX19_05044 at 528.634 kb on - strand, within MPMX19_05044 at 528.644 kb on - strand, within MPMX19_05044 at 529.027 kb on + strand at 529.028 kb on - strand at 529.154 kb on + strand at 529.154 kb on + strand at 529.154 kb on + strand at 529.154 kb on + strand at 529.154 kb on + strand at 529.154 kb on + strand at 529.154 kb on + strand at 529.154 kb on + strand at 529.154 kb on + strand at 529.154 kb on + strand at 529.154 kb on + strand at 529.154 kb on + strand at 529.154 kb on + strand at 529.154 kb on + strand at 529.155 kb on - strand at 529.155 kb on - strand at 529.155 kb on - strand at 529.155 kb on - strand at 529.155 kb on - strand at 529.155 kb on - strand at 529.184 kb on + strand at 529.184 kb on + strand at 529.184 kb on + strand at 529.184 kb on + strand at 529.185 kb on - strand at 529.185 kb on - strand at 529.185 kb on - strand at 529.185 kb on - strand at 529.185 kb on - strand at 529.185 kb on - strand at 529.185 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 526,704 + -1.1 526,704 + -1.0 526,704 + -0.8 526,704 + +0.4 526,705 - -0.9 526,845 + -1.3 526,845 + -0.3 526,845 + -0.8 526,845 + -0.9 526,846 - +0.1 526,876 + -1.1 526,977 + -0.1 526,978 - -0.8 527,109 + MPMX19_05042 0.26 -0.3 527,109 + MPMX19_05042 0.26 -1.0 527,109 + MPMX19_05042 0.26 -1.5 527,109 + MPMX19_05042 0.26 +0.2 527,109 + MPMX19_05042 0.26 +0.9 527,109 + MPMX19_05042 0.26 -0.9 527,110 - MPMX19_05042 0.26 -0.7 527,110 - MPMX19_05042 0.26 +1.5 527,110 - MPMX19_05042 0.26 -0.7 527,110 - MPMX19_05042 0.26 +0.1 527,110 - MPMX19_05042 0.26 +1.0 527,110 - MPMX19_05042 0.26 -0.4 527,110 - MPMX19_05042 0.26 +0.4 527,110 - MPMX19_05042 0.26 -2.3 527,110 - MPMX19_05042 0.26 -0.3 527,110 - MPMX19_05042 0.26 +0.9 527,110 - MPMX19_05042 0.26 +0.3 527,110 - MPMX19_05042 0.26 -0.5 527,178 + MPMX19_05042 0.39 -0.6 527,178 + MPMX19_05042 0.39 -1.8 527,178 + MPMX19_05042 0.39 -2.3 527,178 + MPMX19_05042 0.39 -0.3 527,178 + MPMX19_05042 0.39 -1.7 527,179 - MPMX19_05042 0.39 -0.9 527,179 - MPMX19_05042 0.39 +1.3 527,179 - MPMX19_05042 0.39 -0.3 527,179 - MPMX19_05042 0.39 +0.3 527,184 + MPMX19_05042 0.40 +0.5 527,184 + MPMX19_05042 0.40 +0.6 527,185 - MPMX19_05042 0.40 -1.8 527,185 - MPMX19_05042 0.40 -1.1 527,209 - MPMX19_05042 0.44 -2.8 527,209 - MPMX19_05042 0.44 +1.9 527,271 + MPMX19_05042 0.56 -0.5 527,271 + MPMX19_05042 0.56 -1.1 527,280 + MPMX19_05042 0.57 -1.0 527,281 - MPMX19_05042 0.58 -0.0 527,322 + MPMX19_05042 0.65 +1.0 527,322 + MPMX19_05042 0.65 +0.4 527,322 + MPMX19_05042 0.65 +1.3 527,323 - MPMX19_05042 0.65 +0.1 527,323 - MPMX19_05042 0.65 -0.5 527,323 - MPMX19_05042 0.65 -1.3 527,323 - MPMX19_05042 0.65 -0.7 527,325 + MPMX19_05042 0.66 -0.9 527,325 + MPMX19_05042 0.66 +0.1 527,325 + MPMX19_05042 0.66 +0.7 527,325 + MPMX19_05042 0.66 -2.2 527,326 - MPMX19_05042 0.66 -0.5 527,326 - MPMX19_05042 0.66 -1.3 527,326 - MPMX19_05042 0.66 -1.7 527,326 - MPMX19_05042 0.66 -0.4 527,326 - MPMX19_05042 0.66 -0.7 527,326 - MPMX19_05042 0.66 +0.3 527,355 + MPMX19_05042 0.71 -0.2 527,355 + MPMX19_05042 0.71 -0.8 527,355 + MPMX19_05042 0.71 -0.0 527,355 + MPMX19_05042 0.71 +0.5 527,373 + MPMX19_05042 0.74 -0.2 527,373 + MPMX19_05042 0.74 +1.7 527,374 - MPMX19_05042 0.74 -1.1 527,374 - MPMX19_05042 0.74 +0.4 527,388 + MPMX19_05042 0.77 +1.7 527,388 + MPMX19_05042 0.77 -0.5 527,388 + MPMX19_05042 0.77 -0.0 527,388 + MPMX19_05042 0.77 -0.2 527,388 + MPMX19_05042 0.77 -0.1 527,388 + MPMX19_05042 0.77 -1.2 527,388 + MPMX19_05042 0.77 +0.4 527,388 + MPMX19_05042 0.77 +0.4 527,388 + MPMX19_05042 0.77 +0.2 527,388 + MPMX19_05042 0.77 +0.7 527,388 + MPMX19_05042 0.77 +0.0 527,388 + MPMX19_05042 0.77 -1.7 527,388 + MPMX19_05042 0.77 -0.4 527,388 + MPMX19_05042 0.77 -0.6 527,388 + MPMX19_05042 0.77 +1.4 527,388 + MPMX19_05042 0.77 -0.4 527,388 + MPMX19_05042 0.77 -0.4 527,388 + MPMX19_05042 0.77 -1.2 527,388 + MPMX19_05042 0.77 -0.9 527,388 + MPMX19_05042 0.77 -0.2 527,388 + MPMX19_05042 0.77 +0.3 527,388 + MPMX19_05042 0.77 -1.1 527,389 - MPMX19_05042 0.77 +0.3 527,389 - MPMX19_05042 0.77 -1.7 527,389 - MPMX19_05042 0.77 +0.5 527,389 - MPMX19_05042 0.77 +0.9 527,389 - MPMX19_05042 0.77 -0.8 527,389 - MPMX19_05042 0.77 -0.2 527,389 - MPMX19_05042 0.77 +0.0 527,389 - MPMX19_05042 0.77 -1.4 527,389 - MPMX19_05042 0.77 -0.7 527,389 - MPMX19_05042 0.77 -0.0 527,389 - MPMX19_05042 0.77 -0.5 527,389 - MPMX19_05042 0.77 +1.5 527,389 - MPMX19_05042 0.77 -0.4 527,389 - MPMX19_05042 0.77 -0.7 527,389 - MPMX19_05042 0.77 -0.4 527,389 - MPMX19_05042 0.77 -1.2 527,389 - MPMX19_05042 0.77 -0.2 527,389 - MPMX19_05042 0.77 +0.9 527,389 - MPMX19_05042 0.77 -2.0 527,389 - MPMX19_05042 0.77 -1.0 527,389 - MPMX19_05042 0.77 -2.5 527,389 - MPMX19_05042 0.77 -1.5 527,389 - MPMX19_05042 0.77 -1.2 527,389 - MPMX19_05042 0.77 +0.3 527,389 - MPMX19_05042 0.77 -0.1 527,469 + -2.2 527,469 + -0.1 527,469 + -0.7 527,469 + -1.1 527,470 - -0.1 527,470 - -0.3 527,596 + +0.7 527,621 + +0.9 527,621 + -0.9 527,621 + +0.3 527,621 + -1.6 527,621 + -0.7 527,621 + -0.1 527,621 + -0.6 527,621 + +0.9 527,621 + -0.4 527,621 + -0.5 527,621 + -0.6 527,621 + +0.3 527,621 + -0.6 527,621 + -0.2 527,621 + -0.2 527,621 + +0.0 527,621 + +0.5 527,621 + +0.5 527,622 - -1.5 527,622 - -0.5 527,622 - +0.0 527,622 - +1.1 527,622 - +0.1 527,622 - +1.7 527,622 - +0.4 527,622 - -1.1 527,622 - -0.5 527,622 - -0.2 527,622 - +0.4 527,622 - +1.4 527,622 - -1.6 527,622 - +0.7 527,622 - +1.1 527,622 - +0.7 527,622 - -1.1 527,622 - +0.5 527,622 - -0.1 527,622 - -0.4 527,622 - -0.3 527,622 - -0.0 527,622 - -0.3 527,622 - -0.4 527,622 - -0.4 527,622 - -0.3 527,622 - -0.1 527,641 - -0.5 527,641 - -1.2 527,753 + MPMX19_05043 0.27 -0.4 527,754 - MPMX19_05043 0.27 -0.9 528,068 + MPMX19_05043 0.79 -0.6 528,068 + MPMX19_05043 0.79 -0.3 528,068 + MPMX19_05043 0.79 +0.0 528,068 + MPMX19_05043 0.79 -1.6 528,068 + MPMX19_05043 0.79 -0.3 528,068 + MPMX19_05043 0.79 -0.3 528,068 + MPMX19_05043 0.79 +1.7 528,068 + MPMX19_05043 0.79 -0.6 528,068 + MPMX19_05043 0.79 -0.2 528,068 + MPMX19_05043 0.79 -0.6 528,069 - MPMX19_05043 0.79 +0.6 528,069 - MPMX19_05043 0.79 +0.7 528,069 - MPMX19_05043 0.79 -0.6 528,069 - MPMX19_05043 0.79 +1.7 528,069 - MPMX19_05043 0.79 +1.1 528,069 - MPMX19_05043 0.79 +1.2 528,069 - MPMX19_05043 0.79 +0.5 528,069 - MPMX19_05043 0.79 +0.1 528,086 + MPMX19_05043 0.82 +1.2 528,087 - MPMX19_05043 0.82 +0.4 528,087 - MPMX19_05043 0.82 +0.4 528,631 + MPMX19_05044 0.53 -0.8 528,631 + MPMX19_05044 0.53 +0.2 528,631 + MPMX19_05044 0.53 -1.1 528,631 + MPMX19_05044 0.53 -1.7 528,631 + MPMX19_05044 0.53 -0.5 528,632 - MPMX19_05044 0.53 -1.3 528,634 - MPMX19_05044 0.53 +1.3 528,644 - MPMX19_05044 0.54 -1.5 529,027 + +0.1 529,028 - +0.1 529,154 + -0.9 529,154 + -0.2 529,154 + -0.1 529,154 + -0.8 529,154 + -1.3 529,154 + +0.7 529,154 + -0.1 529,154 + +1.2 529,154 + -1.1 529,154 + +0.5 529,154 + -0.5 529,154 + -0.9 529,154 + +0.7 529,154 + -0.1 529,155 - +0.8 529,155 - +1.0 529,155 - -0.7 529,155 - +0.1 529,155 - +0.3 529,155 - +0.3 529,184 + +0.1 529,184 + +0.5 529,184 + -2.6 529,184 + +0.5 529,185 - -1.6 529,185 - +0.1 529,185 - -1.7 529,185 - -1.3 529,185 - -0.0 529,185 - -0.3 529,185 - -1.4
Or see this region's nucleotide sequence