Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_05039 and MPMX19_05040 are separated by 238 nucleotides MPMX19_05040 and MPMX19_05041 overlap by 4 nucleotides
MPMX19_05039: MPMX19_05039 - ATP synthase subunit beta, at 523,443 to 524,906
_05039
MPMX19_05040: MPMX19_05040 - hypothetical protein, at 525,145 to 525,705
_05040
MPMX19_05041: MPMX19_05041 - 1,3,6,8-tetrahydroxynaphthalene synthase, at 525,702 to 526,760
_05041
Position (kb) 525
526 Strain fitness (log2 ratio) -2
-1
0
1
2 at 525.085 kb on + strand at 525.085 kb on + strand at 525.085 kb on + strand at 525.085 kb on + strand at 525.085 kb on + strand at 525.085 kb on + strand at 525.085 kb on + strand at 525.085 kb on + strand at 525.085 kb on + strand at 525.086 kb on - strand at 525.086 kb on - strand at 525.086 kb on - strand at 525.086 kb on - strand at 525.086 kb on - strand at 525.086 kb on - strand at 525.086 kb on - strand at 525.086 kb on - strand at 525.086 kb on - strand at 525.086 kb on - strand at 525.086 kb on - strand at 525.086 kb on - strand at 525.146 kb on + strand at 525.251 kb on + strand, within MPMX19_05040 at 525.252 kb on - strand, within MPMX19_05040 at 525.308 kb on + strand, within MPMX19_05040 at 525.308 kb on + strand, within MPMX19_05040 at 525.308 kb on + strand, within MPMX19_05040 at 525.308 kb on + strand, within MPMX19_05040 at 525.308 kb on + strand, within MPMX19_05040 at 525.308 kb on + strand, within MPMX19_05040 at 525.308 kb on + strand, within MPMX19_05040 at 525.308 kb on + strand, within MPMX19_05040 at 525.308 kb on + strand, within MPMX19_05040 at 525.308 kb on + strand, within MPMX19_05040 at 525.309 kb on - strand, within MPMX19_05040 at 525.309 kb on - strand, within MPMX19_05040 at 525.309 kb on - strand, within MPMX19_05040 at 525.309 kb on - strand, within MPMX19_05040 at 525.309 kb on - strand, within MPMX19_05040 at 525.469 kb on + strand, within MPMX19_05040 at 525.470 kb on - strand, within MPMX19_05040 at 525.470 kb on - strand, within MPMX19_05040 at 525.566 kb on + strand, within MPMX19_05040 at 526.044 kb on + strand, within MPMX19_05041 at 526.044 kb on + strand, within MPMX19_05041 at 526.044 kb on + strand, within MPMX19_05041 at 526.044 kb on + strand, within MPMX19_05041 at 526.044 kb on + strand, within MPMX19_05041 at 526.044 kb on + strand, within MPMX19_05041 at 526.044 kb on + strand, within MPMX19_05041 at 526.044 kb on + strand, within MPMX19_05041 at 526.045 kb on - strand, within MPMX19_05041 at 526.045 kb on - strand, within MPMX19_05041 at 526.045 kb on - strand, within MPMX19_05041 at 526.045 kb on - strand, within MPMX19_05041 at 526.045 kb on - strand, within MPMX19_05041 at 526.045 kb on - strand, within MPMX19_05041 at 526.045 kb on - strand, within MPMX19_05041 at 526.045 kb on - strand, within MPMX19_05041 at 526.045 kb on - strand, within MPMX19_05041 at 526.045 kb on - strand, within MPMX19_05041 at 526.573 kb on + strand, within MPMX19_05041 at 526.573 kb on + strand, within MPMX19_05041 at 526.573 kb on + strand, within MPMX19_05041 at 526.574 kb on - strand, within MPMX19_05041 at 526.704 kb on + strand at 526.704 kb on + strand at 526.704 kb on + strand at 526.704 kb on + strand at 526.705 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 525,085 + -1.4 525,085 + -0.1 525,085 + -1.1 525,085 + -0.3 525,085 + -0.3 525,085 + +0.3 525,085 + -0.1 525,085 + -1.7 525,085 + +0.4 525,086 - +1.1 525,086 - -0.1 525,086 - +0.1 525,086 - +1.4 525,086 - -1.9 525,086 - +0.7 525,086 - -0.0 525,086 - +0.4 525,086 - -0.3 525,086 - +0.0 525,086 - -1.1 525,086 - +1.3 525,146 + +0.3 525,251 + MPMX19_05040 0.19 -0.6 525,252 - MPMX19_05040 0.19 +0.2 525,308 + MPMX19_05040 0.29 +0.8 525,308 + MPMX19_05040 0.29 +0.3 525,308 + MPMX19_05040 0.29 -0.2 525,308 + MPMX19_05040 0.29 -0.2 525,308 + MPMX19_05040 0.29 +0.1 525,308 + MPMX19_05040 0.29 -0.5 525,308 + MPMX19_05040 0.29 +0.9 525,308 + MPMX19_05040 0.29 -0.3 525,308 + MPMX19_05040 0.29 -0.4 525,308 + MPMX19_05040 0.29 -2.0 525,309 - MPMX19_05040 0.29 +0.4 525,309 - MPMX19_05040 0.29 +0.5 525,309 - MPMX19_05040 0.29 +0.2 525,309 - MPMX19_05040 0.29 -0.7 525,309 - MPMX19_05040 0.29 -0.2 525,469 + MPMX19_05040 0.58 +0.9 525,470 - MPMX19_05040 0.58 -0.3 525,470 - MPMX19_05040 0.58 +0.5 525,566 + MPMX19_05040 0.75 +2.3 526,044 + MPMX19_05041 0.32 -1.2 526,044 + MPMX19_05041 0.32 +0.9 526,044 + MPMX19_05041 0.32 -1.1 526,044 + MPMX19_05041 0.32 -0.9 526,044 + MPMX19_05041 0.32 -0.5 526,044 + MPMX19_05041 0.32 -1.4 526,044 + MPMX19_05041 0.32 -1.3 526,044 + MPMX19_05041 0.32 -0.7 526,045 - MPMX19_05041 0.32 -0.6 526,045 - MPMX19_05041 0.32 +0.7 526,045 - MPMX19_05041 0.32 -1.5 526,045 - MPMX19_05041 0.32 -0.2 526,045 - MPMX19_05041 0.32 +1.1 526,045 - MPMX19_05041 0.32 +0.1 526,045 - MPMX19_05041 0.32 -0.4 526,045 - MPMX19_05041 0.32 -0.3 526,045 - MPMX19_05041 0.32 -1.5 526,045 - MPMX19_05041 0.32 -0.9 526,573 + MPMX19_05041 0.82 -0.5 526,573 + MPMX19_05041 0.82 -1.0 526,573 + MPMX19_05041 0.82 -0.4 526,574 - MPMX19_05041 0.82 +0.1 526,704 + -1.1 526,704 + -1.0 526,704 + -0.8 526,704 + +0.4 526,705 - -0.9
Or see this region's nucleotide sequence