Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_05027

Experiment: NF

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX19_05025 and MPMX19_05026 are separated by 56 nucleotidesMPMX19_05026 and MPMX19_05027 are separated by 105 nucleotidesMPMX19_05027 and MPMX19_05028 are separated by 205 nucleotides MPMX19_05025: MPMX19_05025 - Cytochrome bd-I ubiquinol oxidase subunit 2, at 510,739 to 511,758 _05025 MPMX19_05026: MPMX19_05026 - hypothetical protein, at 511,815 to 512,516 _05026 MPMX19_05027: MPMX19_05027 - hypothetical protein, at 512,622 to 513,341 _05027 MPMX19_05028: MPMX19_05028 - hypothetical protein, at 513,547 to 515,019 _05028 Position (kb) 512 513 514Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 511.696 kb on + strandat 511.696 kb on + strandat 511.696 kb on + strandat 511.697 kb on - strandat 511.697 kb on - strandat 511.705 kb on + strandat 511.705 kb on + strandat 511.705 kb on + strandat 511.706 kb on - strandat 511.706 kb on - strandat 511.711 kb on + strandat 511.711 kb on + strandat 511.711 kb on + strandat 511.750 kb on + strandat 511.750 kb on + strandat 511.750 kb on + strandat 511.780 kb on - strandat 512.085 kb on + strand, within MPMX19_05026at 512.085 kb on + strand, within MPMX19_05026at 512.085 kb on + strand, within MPMX19_05026at 512.085 kb on + strand, within MPMX19_05026at 512.085 kb on + strand, within MPMX19_05026at 512.085 kb on + strand, within MPMX19_05026at 512.085 kb on + strand, within MPMX19_05026at 512.085 kb on + strand, within MPMX19_05026at 512.085 kb on + strand, within MPMX19_05026at 512.085 kb on + strand, within MPMX19_05026at 512.085 kb on + strand, within MPMX19_05026at 512.086 kb on - strand, within MPMX19_05026at 512.086 kb on - strand, within MPMX19_05026at 512.086 kb on - strand, within MPMX19_05026at 512.086 kb on - strand, within MPMX19_05026at 512.086 kb on - strand, within MPMX19_05026at 512.086 kb on - strand, within MPMX19_05026at 512.086 kb on - strand, within MPMX19_05026at 512.086 kb on - strand, within MPMX19_05026at 512.086 kb on - strand, within MPMX19_05026at 512.086 kb on - strand, within MPMX19_05026at 512.086 kb on - strand, within MPMX19_05026at 512.086 kb on - strand, within MPMX19_05026at 512.086 kb on - strand, within MPMX19_05026at 512.086 kb on - strand, within MPMX19_05026at 512.175 kb on + strand, within MPMX19_05026at 512.175 kb on + strand, within MPMX19_05026at 512.175 kb on + strand, within MPMX19_05026at 512.175 kb on + strand, within MPMX19_05026at 512.175 kb on + strand, within MPMX19_05026at 512.175 kb on + strand, within MPMX19_05026at 512.175 kb on + strand, within MPMX19_05026at 512.175 kb on + strand, within MPMX19_05026at 512.175 kb on + strand, within MPMX19_05026at 512.175 kb on + strand, within MPMX19_05026at 512.175 kb on + strand, within MPMX19_05026at 512.175 kb on + strand, within MPMX19_05026at 512.175 kb on + strand, within MPMX19_05026at 512.176 kb on - strand, within MPMX19_05026at 512.176 kb on - strand, within MPMX19_05026at 512.176 kb on - strand, within MPMX19_05026at 512.176 kb on - strand, within MPMX19_05026at 512.176 kb on - strand, within MPMX19_05026at 512.176 kb on - strand, within MPMX19_05026at 512.176 kb on - strand, within MPMX19_05026at 512.176 kb on - strand, within MPMX19_05026at 512.176 kb on - strand, within MPMX19_05026at 512.176 kb on - strand, within MPMX19_05026at 512.176 kb on - strand, within MPMX19_05026at 512.176 kb on - strand, within MPMX19_05026at 512.176 kb on - strand, within MPMX19_05026at 512.176 kb on - strand, within MPMX19_05026at 512.176 kb on - strand, within MPMX19_05026at 512.176 kb on - strand, within MPMX19_05026at 512.176 kb on - strand, within MPMX19_05026at 512.176 kb on - strand, within MPMX19_05026at 512.397 kb on + strand, within MPMX19_05026at 512.397 kb on + strand, within MPMX19_05026at 512.398 kb on - strand, within MPMX19_05026at 512.398 kb on - strand, within MPMX19_05026at 512.398 kb on - strand, within MPMX19_05026at 512.398 kb on - strand, within MPMX19_05026at 512.514 kb on + strandat 512.514 kb on + strandat 512.515 kb on - strandat 512.520 kb on + strandat 512.521 kb on - strandat 512.582 kb on - strandat 512.639 kb on + strandat 512.640 kb on - strandat 512.830 kb on - strand, within MPMX19_05027at 512.830 kb on - strand, within MPMX19_05027at 512.830 kb on - strand, within MPMX19_05027at 512.830 kb on - strand, within MPMX19_05027at 512.830 kb on - strand, within MPMX19_05027at 512.833 kb on - strand, within MPMX19_05027at 512.833 kb on - strand, within MPMX19_05027at 512.833 kb on - strand, within MPMX19_05027at 513.097 kb on + strand, within MPMX19_05027at 513.097 kb on + strand, within MPMX19_05027at 513.097 kb on + strand, within MPMX19_05027at 513.097 kb on + strand, within MPMX19_05027at 513.097 kb on + strand, within MPMX19_05027at 513.097 kb on + strand, within MPMX19_05027at 513.097 kb on + strand, within MPMX19_05027at 513.097 kb on + strand, within MPMX19_05027at 513.097 kb on + strand, within MPMX19_05027at 513.097 kb on + strand, within MPMX19_05027at 513.097 kb on + strand, within MPMX19_05027at 513.097 kb on + strand, within MPMX19_05027at 513.097 kb on + strand, within MPMX19_05027at 513.097 kb on + strand, within MPMX19_05027at 513.097 kb on + strand, within MPMX19_05027at 513.097 kb on + strand, within MPMX19_05027at 513.097 kb on + strand, within MPMX19_05027at 513.097 kb on + strand, within MPMX19_05027at 513.097 kb on + strand, within MPMX19_05027at 513.097 kb on + strand, within MPMX19_05027at 513.097 kb on + strand, within MPMX19_05027at 513.097 kb on + strand, within MPMX19_05027at 513.098 kb on - strand, within MPMX19_05027at 513.098 kb on - strand, within MPMX19_05027at 513.098 kb on - strand, within MPMX19_05027at 513.098 kb on - strand, within MPMX19_05027at 513.098 kb on - strand, within MPMX19_05027at 513.098 kb on - strand, within MPMX19_05027at 513.098 kb on - strand, within MPMX19_05027at 513.098 kb on - strand, within MPMX19_05027at 513.098 kb on - strand, within MPMX19_05027at 513.098 kb on - strand, within MPMX19_05027at 513.098 kb on - strand, within MPMX19_05027at 513.098 kb on - strand, within MPMX19_05027at 513.098 kb on - strand, within MPMX19_05027at 513.098 kb on - strand, within MPMX19_05027at 513.098 kb on - strand, within MPMX19_05027at 513.098 kb on - strand, within MPMX19_05027at 513.098 kb on - strand, within MPMX19_05027at 513.098 kb on - strand, within MPMX19_05027at 513.098 kb on - strand, within MPMX19_05027at 513.098 kb on - strand, within MPMX19_05027at 513.098 kb on - strand, within MPMX19_05027at 513.098 kb on - strand, within MPMX19_05027at 513.098 kb on - strand, within MPMX19_05027at 513.098 kb on - strand, within MPMX19_05027at 513.098 kb on - strand, within MPMX19_05027at 513.297 kb on + strandat 513.297 kb on + strandat 513.297 kb on + strandat 513.297 kb on + strandat 513.297 kb on + strandat 513.297 kb on + strandat 513.297 kb on + strandat 513.298 kb on - strandat 513.298 kb on - strandat 513.298 kb on - strandat 513.298 kb on - strandat 513.298 kb on - strandat 513.298 kb on - strandat 513.298 kb on - strandat 513.298 kb on - strandat 513.299 kb on + strandat 513.299 kb on + strandat 513.299 kb on + strandat 513.299 kb on + strandat 513.299 kb on + strandat 513.299 kb on + strandat 513.299 kb on + strandat 513.299 kb on + strandat 513.299 kb on + strandat 513.299 kb on + strandat 513.299 kb on + strandat 513.299 kb on + strandat 513.299 kb on + strandat 513.299 kb on + strandat 513.299 kb on + strandat 513.299 kb on + strandat 513.299 kb on + strandat 513.299 kb on + strandat 513.299 kb on + strandat 513.299 kb on + strandat 513.299 kb on + strandat 513.300 kb on - strandat 513.300 kb on - strandat 513.300 kb on - strandat 513.300 kb on - strandat 513.300 kb on - strandat 513.300 kb on - strandat 513.300 kb on - strandat 513.300 kb on - strandat 513.300 kb on - strandat 513.300 kb on - strandat 513.300 kb on - strandat 513.300 kb on - strandat 513.300 kb on - strandat 513.300 kb on - strandat 513.300 kb on - strandat 513.300 kb on - strandat 513.300 kb on - strandat 513.300 kb on - strandat 513.300 kb on - strandat 513.398 kb on - strandat 513.398 kb on - strandat 513.398 kb on - strandat 513.398 kb on - strandat 513.398 kb on - strandat 513.495 kb on + strandat 513.495 kb on + strandat 513.495 kb on + strandat 513.495 kb on + strandat 513.496 kb on - strandat 513.496 kb on - strandat 513.496 kb on - strandat 513.496 kb on - strandat 513.496 kb on - strandat 513.509 kb on + strandat 513.509 kb on + strandat 513.509 kb on + strandat 513.568 kb on + strandat 513.569 kb on - strandat 513.569 kb on - strandat 513.569 kb on - strandat 513.569 kb on - strandat 513.569 kb on - strandat 513.736 kb on + strand, within MPMX19_05028at 513.736 kb on + strand, within MPMX19_05028at 513.736 kb on + strand, within MPMX19_05028at 513.737 kb on - strand, within MPMX19_05028at 513.737 kb on - strand, within MPMX19_05028at 513.919 kb on + strand, within MPMX19_05028at 513.919 kb on + strand, within MPMX19_05028at 513.919 kb on + strand, within MPMX19_05028at 513.920 kb on - strand, within MPMX19_05028at 513.920 kb on - strand, within MPMX19_05028at 513.920 kb on - strand, within MPMX19_05028at 513.920 kb on - strand, within MPMX19_05028at 513.920 kb on - strand, within MPMX19_05028at 513.920 kb on - strand, within MPMX19_05028at 513.994 kb on + strand, within MPMX19_05028at 513.994 kb on + strand, within MPMX19_05028at 513.994 kb on + strand, within MPMX19_05028at 513.995 kb on - strand, within MPMX19_05028at 513.995 kb on - strand, within MPMX19_05028at 514.027 kb on + strand, within MPMX19_05028at 514.027 kb on + strand, within MPMX19_05028at 514.027 kb on + strand, within MPMX19_05028at 514.027 kb on + strand, within MPMX19_05028at 514.027 kb on + strand, within MPMX19_05028at 514.027 kb on + strand, within MPMX19_05028at 514.027 kb on + strand, within MPMX19_05028at 514.027 kb on + strand, within MPMX19_05028at 514.027 kb on + strand, within MPMX19_05028at 514.027 kb on + strand, within MPMX19_05028at 514.027 kb on + strand, within MPMX19_05028at 514.028 kb on - strand, within MPMX19_05028at 514.028 kb on - strand, within MPMX19_05028at 514.028 kb on - strand, within MPMX19_05028at 514.028 kb on - strand, within MPMX19_05028at 514.028 kb on - strand, within MPMX19_05028at 514.028 kb on - strand, within MPMX19_05028at 514.028 kb on - strand, within MPMX19_05028at 514.028 kb on - strand, within MPMX19_05028at 514.028 kb on - strand, within MPMX19_05028at 514.028 kb on - strand, within MPMX19_05028at 514.273 kb on + strand, within MPMX19_05028at 514.273 kb on + strand, within MPMX19_05028at 514.273 kb on + strand, within MPMX19_05028at 514.273 kb on + strand, within MPMX19_05028

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Per-strain Table

Position Strand Gene LocusTag Fraction NF
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511,696 + -0.2
511,696 + -0.4
511,696 + -1.3
511,697 - -0.8
511,697 - -1.2
511,705 + -0.4
511,705 + -0.4
511,705 + -0.1
511,706 - -0.1
511,706 - +0.1
511,711 + +0.4
511,711 + +0.1
511,711 + -0.9
511,750 + -1.3
511,750 + -0.2
511,750 + -0.0
511,780 - -1.5
512,085 + MPMX19_05026 0.38 +1.7
512,085 + MPMX19_05026 0.38 +0.4
512,085 + MPMX19_05026 0.38 -0.2
512,085 + MPMX19_05026 0.38 -0.7
512,085 + MPMX19_05026 0.38 -1.0
512,085 + MPMX19_05026 0.38 +1.5
512,085 + MPMX19_05026 0.38 -1.4
512,085 + MPMX19_05026 0.38 +1.7
512,085 + MPMX19_05026 0.38 +1.0
512,085 + MPMX19_05026 0.38 +1.7
512,085 + MPMX19_05026 0.38 +0.3
512,086 - MPMX19_05026 0.39 +1.7
512,086 - MPMX19_05026 0.39 -0.3
512,086 - MPMX19_05026 0.39 +0.1
512,086 - MPMX19_05026 0.39 -1.6
512,086 - MPMX19_05026 0.39 +0.4
512,086 - MPMX19_05026 0.39 -0.6
512,086 - MPMX19_05026 0.39 -0.4
512,086 - MPMX19_05026 0.39 -0.0
512,086 - MPMX19_05026 0.39 -1.8
512,086 - MPMX19_05026 0.39 +2.3
512,086 - MPMX19_05026 0.39 -2.4
512,086 - MPMX19_05026 0.39 -1.5
512,086 - MPMX19_05026 0.39 +1.3
512,086 - MPMX19_05026 0.39 -0.3
512,175 + MPMX19_05026 0.51 +0.1
512,175 + MPMX19_05026 0.51 +0.6
512,175 + MPMX19_05026 0.51 -1.5
512,175 + MPMX19_05026 0.51 -0.7
512,175 + MPMX19_05026 0.51 -0.8
512,175 + MPMX19_05026 0.51 -0.3
512,175 + MPMX19_05026 0.51 -0.6
512,175 + MPMX19_05026 0.51 +1.1
512,175 + MPMX19_05026 0.51 -0.8
512,175 + MPMX19_05026 0.51 -0.4
512,175 + MPMX19_05026 0.51 -1.5
512,175 + MPMX19_05026 0.51 -1.0
512,175 + MPMX19_05026 0.51 -0.7
512,176 - MPMX19_05026 0.51 +1.9
512,176 - MPMX19_05026 0.51 -0.3
512,176 - MPMX19_05026 0.51 -0.1
512,176 - MPMX19_05026 0.51 -1.3
512,176 - MPMX19_05026 0.51 -0.6
512,176 - MPMX19_05026 0.51 +0.5
512,176 - MPMX19_05026 0.51 -1.1
512,176 - MPMX19_05026 0.51 +0.5
512,176 - MPMX19_05026 0.51 -0.3
512,176 - MPMX19_05026 0.51 +0.4
512,176 - MPMX19_05026 0.51 +0.2
512,176 - MPMX19_05026 0.51 +0.2
512,176 - MPMX19_05026 0.51 -0.1
512,176 - MPMX19_05026 0.51 -0.2
512,176 - MPMX19_05026 0.51 -2.3
512,176 - MPMX19_05026 0.51 +0.4
512,176 - MPMX19_05026 0.51 +0.0
512,176 - MPMX19_05026 0.51 -1.5
512,397 + MPMX19_05026 0.83 -1.0
512,397 + MPMX19_05026 0.83 -0.6
512,398 - MPMX19_05026 0.83 +1.3
512,398 - MPMX19_05026 0.83 +0.2
512,398 - MPMX19_05026 0.83 -0.6
512,398 - MPMX19_05026 0.83 -1.6
512,514 + -1.6
512,514 + -0.8
512,515 - +0.1
512,520 + -2.0
512,521 - +0.5
512,582 - -1.1
512,639 + +0.1
512,640 - -1.1
512,830 - MPMX19_05027 0.29 +0.9
512,830 - MPMX19_05027 0.29 -0.6
512,830 - MPMX19_05027 0.29 -0.6
512,830 - MPMX19_05027 0.29 -1.3
512,830 - MPMX19_05027 0.29 -0.2
512,833 - MPMX19_05027 0.29 -0.8
512,833 - MPMX19_05027 0.29 -1.5
512,833 - MPMX19_05027 0.29 +0.4
513,097 + MPMX19_05027 0.66 -1.3
513,097 + MPMX19_05027 0.66 +1.2
513,097 + MPMX19_05027 0.66 -0.2
513,097 + MPMX19_05027 0.66 +0.2
513,097 + MPMX19_05027 0.66 +0.5
513,097 + MPMX19_05027 0.66 -1.0
513,097 + MPMX19_05027 0.66 -0.6
513,097 + MPMX19_05027 0.66 +0.5
513,097 + MPMX19_05027 0.66 -0.9
513,097 + MPMX19_05027 0.66 -0.5
513,097 + MPMX19_05027 0.66 +1.7
513,097 + MPMX19_05027 0.66 -0.1
513,097 + MPMX19_05027 0.66 +0.1
513,097 + MPMX19_05027 0.66 +0.5
513,097 + MPMX19_05027 0.66 -0.8
513,097 + MPMX19_05027 0.66 -0.7
513,097 + MPMX19_05027 0.66 -0.2
513,097 + MPMX19_05027 0.66 -1.1
513,097 + MPMX19_05027 0.66 +0.4
513,097 + MPMX19_05027 0.66 -0.8
513,097 + MPMX19_05027 0.66 -0.2
513,097 + MPMX19_05027 0.66 -0.3
513,098 - MPMX19_05027 0.66 +0.8
513,098 - MPMX19_05027 0.66 +0.3
513,098 - MPMX19_05027 0.66 +0.4
513,098 - MPMX19_05027 0.66 +1.7
513,098 - MPMX19_05027 0.66 -1.8
513,098 - MPMX19_05027 0.66 -1.8
513,098 - MPMX19_05027 0.66 +0.5
513,098 - MPMX19_05027 0.66 -0.1
513,098 - MPMX19_05027 0.66 +0.4
513,098 - MPMX19_05027 0.66 +0.1
513,098 - MPMX19_05027 0.66 -0.3
513,098 - MPMX19_05027 0.66 -2.8
513,098 - MPMX19_05027 0.66 -0.3
513,098 - MPMX19_05027 0.66 -0.2
513,098 - MPMX19_05027 0.66 -2.2
513,098 - MPMX19_05027 0.66 +0.5
513,098 - MPMX19_05027 0.66 +0.5
513,098 - MPMX19_05027 0.66 -1.8
513,098 - MPMX19_05027 0.66 -0.6
513,098 - MPMX19_05027 0.66 +0.8
513,098 - MPMX19_05027 0.66 -0.5
513,098 - MPMX19_05027 0.66 -0.5
513,098 - MPMX19_05027 0.66 -1.0
513,098 - MPMX19_05027 0.66 +0.2
513,098 - MPMX19_05027 0.66 -1.9
513,297 + +0.5
513,297 + +0.1
513,297 + -2.0
513,297 + -0.8
513,297 + -0.8
513,297 + -1.2
513,297 + -0.5
513,298 - -2.3
513,298 - -0.2
513,298 - -0.8
513,298 - -0.0
513,298 - -0.3
513,298 - -1.1
513,298 - +0.2
513,298 - -0.8
513,299 + -1.4
513,299 + -0.3
513,299 + -0.6
513,299 + -0.5
513,299 + +0.5
513,299 + +0.5
513,299 + -1.6
513,299 + -2.4
513,299 + -0.1
513,299 + -0.1
513,299 + +0.8
513,299 + -0.2
513,299 + +1.1
513,299 + -0.5
513,299 + +0.3
513,299 + +0.2
513,299 + -0.2
513,299 + -0.2
513,299 + +0.9
513,299 + -1.3
513,299 + -1.0
513,300 - +0.9
513,300 - -1.3
513,300 - -0.4
513,300 - -0.4
513,300 - +1.7
513,300 - +0.3
513,300 - -0.1
513,300 - +0.5
513,300 - -0.1
513,300 - -0.3
513,300 - -0.1
513,300 - +0.4
513,300 - -0.3
513,300 - +0.8
513,300 - -0.4
513,300 - -1.1
513,300 - -0.3
513,300 - -0.9
513,300 - -0.1
513,398 - -2.2
513,398 - +0.9
513,398 - -0.8
513,398 - -0.0
513,398 - -0.1
513,495 + -0.0
513,495 + -0.3
513,495 + +0.1
513,495 + -0.1
513,496 - +0.4
513,496 - -0.8
513,496 - -0.3
513,496 - -0.9
513,496 - +0.3
513,509 + -0.1
513,509 + -1.5
513,509 + -0.6
513,568 + +0.2
513,569 - +1.4
513,569 - -0.3
513,569 - -1.2
513,569 - -0.5
513,569 - -0.8
513,736 + MPMX19_05028 0.13 -0.3
513,736 + MPMX19_05028 0.13 -1.2
513,736 + MPMX19_05028 0.13 +0.7
513,737 - MPMX19_05028 0.13 -1.1
513,737 - MPMX19_05028 0.13 +0.7
513,919 + MPMX19_05028 0.25 -1.5
513,919 + MPMX19_05028 0.25 +2.1
513,919 + MPMX19_05028 0.25 -2.1
513,920 - MPMX19_05028 0.25 -0.5
513,920 - MPMX19_05028 0.25 +0.1
513,920 - MPMX19_05028 0.25 -0.2
513,920 - MPMX19_05028 0.25 +1.8
513,920 - MPMX19_05028 0.25 -1.8
513,920 - MPMX19_05028 0.25 +0.1
513,994 + MPMX19_05028 0.30 -0.1
513,994 + MPMX19_05028 0.30 +0.5
513,994 + MPMX19_05028 0.30 -1.0
513,995 - MPMX19_05028 0.30 -0.6
513,995 - MPMX19_05028 0.30 -0.5
514,027 + MPMX19_05028 0.33 -0.1
514,027 + MPMX19_05028 0.33 -0.6
514,027 + MPMX19_05028 0.33 -0.8
514,027 + MPMX19_05028 0.33 -0.3
514,027 + MPMX19_05028 0.33 +0.7
514,027 + MPMX19_05028 0.33 -0.3
514,027 + MPMX19_05028 0.33 -1.8
514,027 + MPMX19_05028 0.33 +0.3
514,027 + MPMX19_05028 0.33 -1.5
514,027 + MPMX19_05028 0.33 -1.1
514,027 + MPMX19_05028 0.33 -0.1
514,028 - MPMX19_05028 0.33 -0.5
514,028 - MPMX19_05028 0.33 -0.9
514,028 - MPMX19_05028 0.33 -1.0
514,028 - MPMX19_05028 0.33 -0.6
514,028 - MPMX19_05028 0.33 -1.5
514,028 - MPMX19_05028 0.33 -0.9
514,028 - MPMX19_05028 0.33 -1.1
514,028 - MPMX19_05028 0.33 -1.2
514,028 - MPMX19_05028 0.33 +0.2
514,028 - MPMX19_05028 0.33 +0.5
514,273 + MPMX19_05028 0.49 -0.6
514,273 + MPMX19_05028 0.49 -1.1
514,273 + MPMX19_05028 0.49 +0.9
514,273 + MPMX19_05028 0.49 -1.1

Or see this region's nucleotide sequence