Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_04656 and MPMX19_04657 overlap by 4 nucleotides MPMX19_04657 and MPMX19_04658 are separated by 1 nucleotides
MPMX19_04656: MPMX19_04656 - Acetophenone carboxylase delta subunit, at 42,243 to 44,000
_04656
MPMX19_04657: MPMX19_04657 - 2,3-dimethylmalate lyase, at 43,997 to 44,899
_04657
MPMX19_04658: MPMX19_04658 - hypothetical protein, at 44,901 to 46,328
_04658
Position (kb)
43
44
45 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 43.090 kb on + strand, within MPMX19_04656 at 43.090 kb on + strand, within MPMX19_04656 at 43.090 kb on + strand, within MPMX19_04656 at 43.090 kb on + strand, within MPMX19_04656 at 43.090 kb on + strand, within MPMX19_04656 at 43.090 kb on + strand, within MPMX19_04656 at 43.091 kb on - strand, within MPMX19_04656 at 43.091 kb on - strand, within MPMX19_04656 at 43.091 kb on - strand, within MPMX19_04656 at 43.091 kb on - strand, within MPMX19_04656 at 43.091 kb on - strand, within MPMX19_04656 at 43.091 kb on - strand, within MPMX19_04656 at 43.091 kb on - strand, within MPMX19_04656 at 43.091 kb on - strand, within MPMX19_04656 at 43.114 kb on + strand, within MPMX19_04656 at 43.115 kb on - strand, within MPMX19_04656 at 43.243 kb on + strand, within MPMX19_04656 at 43.244 kb on - strand, within MPMX19_04656 at 43.244 kb on - strand, within MPMX19_04656 at 43.244 kb on - strand, within MPMX19_04656 at 43.244 kb on - strand, within MPMX19_04656 at 43.258 kb on + strand, within MPMX19_04656 at 43.258 kb on + strand, within MPMX19_04656 at 43.258 kb on + strand, within MPMX19_04656 at 43.259 kb on - strand, within MPMX19_04656 at 43.259 kb on - strand, within MPMX19_04656 at 43.259 kb on - strand, within MPMX19_04656 at 43.259 kb on - strand, within MPMX19_04656 at 43.259 kb on - strand, within MPMX19_04656 at 43.426 kb on + strand, within MPMX19_04656 at 43.426 kb on + strand, within MPMX19_04656 at 43.426 kb on + strand, within MPMX19_04656 at 43.426 kb on + strand, within MPMX19_04656 at 43.426 kb on + strand, within MPMX19_04656 at 43.426 kb on + strand, within MPMX19_04656 at 43.426 kb on + strand, within MPMX19_04656 at 43.426 kb on + strand, within MPMX19_04656 at 43.427 kb on - strand, within MPMX19_04656 at 43.427 kb on - strand, within MPMX19_04656 at 43.427 kb on - strand, within MPMX19_04656 at 43.427 kb on - strand, within MPMX19_04656 at 43.427 kb on - strand, within MPMX19_04656 at 43.684 kb on + strand, within MPMX19_04656 at 43.684 kb on + strand, within MPMX19_04656 at 43.685 kb on - strand, within MPMX19_04656 at 43.685 kb on - strand, within MPMX19_04656 at 43.837 kb on + strand at 43.837 kb on + strand at 43.837 kb on + strand at 43.838 kb on - strand at 43.838 kb on - strand at 43.838 kb on - strand at 43.838 kb on - strand at 43.838 kb on - strand at 43.838 kb on - strand at 43.894 kb on + strand at 44.036 kb on - strand at 44.037 kb on + strand at 44.037 kb on + strand at 44.037 kb on + strand at 44.037 kb on + strand at 44.037 kb on + strand at 44.037 kb on + strand at 44.037 kb on + strand at 44.037 kb on + strand at 44.037 kb on + strand at 44.037 kb on + strand at 44.037 kb on + strand at 44.037 kb on + strand at 44.037 kb on + strand at 44.038 kb on - strand at 44.038 kb on - strand at 44.038 kb on - strand at 44.038 kb on - strand at 44.038 kb on - strand at 44.038 kb on - strand at 44.038 kb on - strand at 44.038 kb on - strand at 44.038 kb on - strand at 44.151 kb on + strand, within MPMX19_04657 at 44.152 kb on - strand, within MPMX19_04657 at 44.152 kb on - strand, within MPMX19_04657 at 44.152 kb on - strand, within MPMX19_04657 at 44.154 kb on + strand, within MPMX19_04657 at 44.154 kb on + strand, within MPMX19_04657 at 44.154 kb on + strand, within MPMX19_04657 at 44.155 kb on - strand, within MPMX19_04657 at 44.155 kb on - strand, within MPMX19_04657 at 44.155 kb on - strand, within MPMX19_04657 at 44.155 kb on - strand, within MPMX19_04657 at 44.155 kb on - strand, within MPMX19_04657 at 44.155 kb on - strand, within MPMX19_04657 at 44.379 kb on + strand, within MPMX19_04657 at 44.379 kb on + strand, within MPMX19_04657 at 44.379 kb on + strand, within MPMX19_04657 at 44.379 kb on + strand, within MPMX19_04657 at 44.379 kb on + strand, within MPMX19_04657 at 44.379 kb on + strand, within MPMX19_04657 at 44.379 kb on + strand, within MPMX19_04657 at 44.380 kb on - strand, within MPMX19_04657 at 44.380 kb on - strand, within MPMX19_04657 at 44.380 kb on - strand, within MPMX19_04657 at 44.380 kb on - strand, within MPMX19_04657 at 44.637 kb on + strand, within MPMX19_04657 at 44.638 kb on - strand, within MPMX19_04657 at 44.754 kb on + strand, within MPMX19_04657 at 44.754 kb on + strand, within MPMX19_04657 at 44.754 kb on + strand, within MPMX19_04657 at 44.754 kb on + strand, within MPMX19_04657 at 44.754 kb on + strand, within MPMX19_04657 at 44.754 kb on + strand, within MPMX19_04657 at 44.754 kb on + strand, within MPMX19_04657 at 44.755 kb on - strand, within MPMX19_04657 at 44.755 kb on - strand, within MPMX19_04657 at 44.755 kb on - strand, within MPMX19_04657 at 44.755 kb on - strand, within MPMX19_04657 at 44.778 kb on + strand, within MPMX19_04657 at 44.778 kb on + strand, within MPMX19_04657 at 44.779 kb on - strand, within MPMX19_04657 at 44.779 kb on - strand, within MPMX19_04657 at 44.779 kb on - strand, within MPMX19_04657 at 44.779 kb on - strand, within MPMX19_04657 at 44.779 kb on - strand, within MPMX19_04657 at 44.779 kb on - strand, within MPMX19_04657 at 44.779 kb on - strand, within MPMX19_04657 at 44.779 kb on - strand, within MPMX19_04657 at 44.829 kb on + strand at 44.829 kb on + strand at 44.830 kb on - strand at 44.830 kb on - strand at 44.830 kb on - strand at 44.830 kb on - strand at 44.830 kb on - strand at 45.070 kb on + strand, within MPMX19_04658 at 45.070 kb on + strand, within MPMX19_04658 at 45.070 kb on + strand, within MPMX19_04658 at 45.070 kb on + strand, within MPMX19_04658 at 45.071 kb on - strand, within MPMX19_04658 at 45.373 kb on + strand, within MPMX19_04658 at 45.373 kb on + strand, within MPMX19_04658 at 45.373 kb on + strand, within MPMX19_04658 at 45.373 kb on + strand, within MPMX19_04658 at 45.373 kb on + strand, within MPMX19_04658 at 45.373 kb on + strand, within MPMX19_04658 at 45.373 kb on + strand, within MPMX19_04658 at 45.373 kb on + strand, within MPMX19_04658 at 45.373 kb on + strand, within MPMX19_04658 at 45.373 kb on + strand, within MPMX19_04658 at 45.373 kb on + strand, within MPMX19_04658 at 45.373 kb on + strand, within MPMX19_04658 at 45.373 kb on + strand, within MPMX19_04658 at 45.373 kb on + strand, within MPMX19_04658 at 45.373 kb on + strand, within MPMX19_04658 at 45.373 kb on + strand, within MPMX19_04658 at 45.373 kb on + strand, within MPMX19_04658 at 45.373 kb on + strand, within MPMX19_04658 at 45.373 kb on + strand, within MPMX19_04658 at 45.373 kb on + strand, within MPMX19_04658 at 45.373 kb on + strand, within MPMX19_04658 at 45.373 kb on + strand, within MPMX19_04658 at 45.373 kb on + strand, within MPMX19_04658 at 45.373 kb on + strand, within MPMX19_04658 at 45.373 kb on + strand, within MPMX19_04658 at 45.373 kb on + strand, within MPMX19_04658 at 45.373 kb on + strand, within MPMX19_04658 at 45.373 kb on + strand, within MPMX19_04658 at 45.374 kb on - strand, within MPMX19_04658 at 45.374 kb on - strand, within MPMX19_04658 at 45.374 kb on - strand, within MPMX19_04658 at 45.374 kb on - strand, within MPMX19_04658 at 45.374 kb on - strand, within MPMX19_04658 at 45.374 kb on - strand, within MPMX19_04658 at 45.374 kb on - strand, within MPMX19_04658 at 45.374 kb on - strand, within MPMX19_04658 at 45.374 kb on - strand, within MPMX19_04658 at 45.374 kb on - strand, within MPMX19_04658 at 45.374 kb on - strand, within MPMX19_04658 at 45.374 kb on - strand, within MPMX19_04658 at 45.374 kb on - strand, within MPMX19_04658 at 45.374 kb on - strand, within MPMX19_04658 at 45.374 kb on - strand, within MPMX19_04658 at 45.374 kb on - strand, within MPMX19_04658 at 45.374 kb on - strand, within MPMX19_04658 at 45.374 kb on - strand, within MPMX19_04658 at 45.374 kb on - strand, within MPMX19_04658 at 45.374 kb on - strand, within MPMX19_04658 at 45.374 kb on - strand, within MPMX19_04658 at 45.374 kb on - strand, within MPMX19_04658 at 45.374 kb on - strand, within MPMX19_04658 at 45.374 kb on - strand, within MPMX19_04658 at 45.374 kb on - strand, within MPMX19_04658 at 45.374 kb on - strand, within MPMX19_04658 at 45.374 kb on - strand, within MPMX19_04658 at 45.374 kb on - strand, within MPMX19_04658 at 45.374 kb on - strand, within MPMX19_04658 at 45.374 kb on - strand, within MPMX19_04658 at 45.374 kb on - strand, within MPMX19_04658 at 45.469 kb on + strand, within MPMX19_04658 at 45.469 kb on + strand, within MPMX19_04658 at 45.469 kb on + strand, within MPMX19_04658 at 45.470 kb on - strand, within MPMX19_04658 at 45.470 kb on - strand, within MPMX19_04658 at 45.470 kb on - strand, within MPMX19_04658 at 45.496 kb on + strand, within MPMX19_04658 at 45.496 kb on + strand, within MPMX19_04658 at 45.496 kb on + strand, within MPMX19_04658 at 45.496 kb on + strand, within MPMX19_04658 at 45.496 kb on + strand, within MPMX19_04658 at 45.496 kb on + strand, within MPMX19_04658 at 45.497 kb on - strand, within MPMX19_04658 at 45.497 kb on - strand, within MPMX19_04658 at 45.497 kb on - strand, within MPMX19_04658 at 45.497 kb on - strand, within MPMX19_04658 at 45.497 kb on - strand, within MPMX19_04658 at 45.497 kb on - strand, within MPMX19_04658 at 45.667 kb on + strand, within MPMX19_04658 at 45.667 kb on + strand, within MPMX19_04658 at 45.667 kb on + strand, within MPMX19_04658 at 45.880 kb on + strand, within MPMX19_04658
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 43,090 + MPMX19_04656 0.48 +0.4 43,090 + MPMX19_04656 0.48 -0.8 43,090 + MPMX19_04656 0.48 +0.7 43,090 + MPMX19_04656 0.48 +0.5 43,090 + MPMX19_04656 0.48 -0.4 43,090 + MPMX19_04656 0.48 -0.1 43,091 - MPMX19_04656 0.48 -0.2 43,091 - MPMX19_04656 0.48 -0.1 43,091 - MPMX19_04656 0.48 +1.2 43,091 - MPMX19_04656 0.48 +0.3 43,091 - MPMX19_04656 0.48 +0.1 43,091 - MPMX19_04656 0.48 +0.9 43,091 - MPMX19_04656 0.48 +0.7 43,091 - MPMX19_04656 0.48 -0.3 43,114 + MPMX19_04656 0.50 -0.3 43,115 - MPMX19_04656 0.50 +0.1 43,243 + MPMX19_04656 0.57 -0.1 43,244 - MPMX19_04656 0.57 -0.0 43,244 - MPMX19_04656 0.57 -1.8 43,244 - MPMX19_04656 0.57 +0.7 43,244 - MPMX19_04656 0.57 +0.7 43,258 + MPMX19_04656 0.58 +0.2 43,258 + MPMX19_04656 0.58 -0.7 43,258 + MPMX19_04656 0.58 +0.2 43,259 - MPMX19_04656 0.58 -1.0 43,259 - MPMX19_04656 0.58 +0.5 43,259 - MPMX19_04656 0.58 -0.7 43,259 - MPMX19_04656 0.58 +1.3 43,259 - MPMX19_04656 0.58 -0.7 43,426 + MPMX19_04656 0.67 -0.7 43,426 + MPMX19_04656 0.67 +0.3 43,426 + MPMX19_04656 0.67 -1.1 43,426 + MPMX19_04656 0.67 -1.3 43,426 + MPMX19_04656 0.67 +1.1 43,426 + MPMX19_04656 0.67 +0.4 43,426 + MPMX19_04656 0.67 -1.1 43,426 + MPMX19_04656 0.67 -0.3 43,427 - MPMX19_04656 0.67 -0.7 43,427 - MPMX19_04656 0.67 +0.6 43,427 - MPMX19_04656 0.67 -0.3 43,427 - MPMX19_04656 0.67 +0.3 43,427 - MPMX19_04656 0.67 -1.4 43,684 + MPMX19_04656 0.82 -0.3 43,684 + MPMX19_04656 0.82 +0.7 43,685 - MPMX19_04656 0.82 -0.9 43,685 - MPMX19_04656 0.82 -0.3 43,837 + -0.2 43,837 + -0.1 43,837 + -0.1 43,838 - -2.2 43,838 - -0.5 43,838 - -0.8 43,838 - -0.5 43,838 - +0.9 43,838 - +0.8 43,894 + -1.9 44,036 - -0.1 44,037 + -0.4 44,037 + +1.1 44,037 + +0.5 44,037 + +0.1 44,037 + -1.7 44,037 + +0.1 44,037 + -0.3 44,037 + +0.0 44,037 + -0.5 44,037 + -0.3 44,037 + +0.4 44,037 + -0.8 44,037 + -1.3 44,038 - -2.6 44,038 - -0.4 44,038 - +0.3 44,038 - +0.3 44,038 - +0.8 44,038 - +1.1 44,038 - -0.3 44,038 - -0.7 44,038 - -0.9 44,151 + MPMX19_04657 0.17 -0.2 44,152 - MPMX19_04657 0.17 +0.3 44,152 - MPMX19_04657 0.17 -0.3 44,152 - MPMX19_04657 0.17 +1.7 44,154 + MPMX19_04657 0.17 +0.5 44,154 + MPMX19_04657 0.17 +0.0 44,154 + MPMX19_04657 0.17 -0.9 44,155 - MPMX19_04657 0.17 +0.5 44,155 - MPMX19_04657 0.17 +1.6 44,155 - MPMX19_04657 0.17 -0.9 44,155 - MPMX19_04657 0.17 +0.9 44,155 - MPMX19_04657 0.17 +0.3 44,155 - MPMX19_04657 0.17 +0.1 44,379 + MPMX19_04657 0.42 -0.5 44,379 + MPMX19_04657 0.42 +0.4 44,379 + MPMX19_04657 0.42 +2.0 44,379 + MPMX19_04657 0.42 +0.1 44,379 + MPMX19_04657 0.42 +0.1 44,379 + MPMX19_04657 0.42 +0.1 44,379 + MPMX19_04657 0.42 -0.3 44,380 - MPMX19_04657 0.42 -0.5 44,380 - MPMX19_04657 0.42 +0.1 44,380 - MPMX19_04657 0.42 +0.3 44,380 - MPMX19_04657 0.42 +0.1 44,637 + MPMX19_04657 0.71 -0.9 44,638 - MPMX19_04657 0.71 +0.1 44,754 + MPMX19_04657 0.84 +1.0 44,754 + MPMX19_04657 0.84 -0.4 44,754 + MPMX19_04657 0.84 -0.3 44,754 + MPMX19_04657 0.84 -0.8 44,754 + MPMX19_04657 0.84 +1.8 44,754 + MPMX19_04657 0.84 -0.0 44,754 + MPMX19_04657 0.84 -0.8 44,755 - MPMX19_04657 0.84 +1.7 44,755 - MPMX19_04657 0.84 +0.7 44,755 - MPMX19_04657 0.84 +0.2 44,755 - MPMX19_04657 0.84 -0.0 44,778 + MPMX19_04657 0.86 +0.7 44,778 + MPMX19_04657 0.86 +0.3 44,779 - MPMX19_04657 0.87 +1.4 44,779 - MPMX19_04657 0.87 -0.3 44,779 - MPMX19_04657 0.87 -1.0 44,779 - MPMX19_04657 0.87 -0.3 44,779 - MPMX19_04657 0.87 +1.7 44,779 - MPMX19_04657 0.87 -0.3 44,779 - MPMX19_04657 0.87 -2.6 44,779 - MPMX19_04657 0.87 -1.2 44,829 + -0.4 44,829 + -0.3 44,830 - -1.1 44,830 - -0.6 44,830 - +0.3 44,830 - -1.1 44,830 - -0.4 45,070 + MPMX19_04658 0.12 -1.5 45,070 + MPMX19_04658 0.12 -0.2 45,070 + MPMX19_04658 0.12 -0.6 45,070 + MPMX19_04658 0.12 -0.1 45,071 - MPMX19_04658 0.12 -0.6 45,373 + MPMX19_04658 0.33 -1.2 45,373 + MPMX19_04658 0.33 +0.0 45,373 + MPMX19_04658 0.33 -1.3 45,373 + MPMX19_04658 0.33 -0.3 45,373 + MPMX19_04658 0.33 +2.3 45,373 + MPMX19_04658 0.33 -0.5 45,373 + MPMX19_04658 0.33 +0.1 45,373 + MPMX19_04658 0.33 -0.9 45,373 + MPMX19_04658 0.33 -0.4 45,373 + MPMX19_04658 0.33 +1.7 45,373 + MPMX19_04658 0.33 -0.3 45,373 + MPMX19_04658 0.33 -0.1 45,373 + MPMX19_04658 0.33 +1.7 45,373 + MPMX19_04658 0.33 +1.4 45,373 + MPMX19_04658 0.33 -0.1 45,373 + MPMX19_04658 0.33 -0.6 45,373 + MPMX19_04658 0.33 +0.1 45,373 + MPMX19_04658 0.33 +0.4 45,373 + MPMX19_04658 0.33 +0.2 45,373 + MPMX19_04658 0.33 +0.6 45,373 + MPMX19_04658 0.33 -1.3 45,373 + MPMX19_04658 0.33 -0.1 45,373 + MPMX19_04658 0.33 -2.1 45,373 + MPMX19_04658 0.33 -0.1 45,373 + MPMX19_04658 0.33 -0.1 45,373 + MPMX19_04658 0.33 +0.8 45,373 + MPMX19_04658 0.33 -0.3 45,373 + MPMX19_04658 0.33 -0.2 45,374 - MPMX19_04658 0.33 +0.5 45,374 - MPMX19_04658 0.33 -0.9 45,374 - MPMX19_04658 0.33 +0.4 45,374 - MPMX19_04658 0.33 +0.7 45,374 - MPMX19_04658 0.33 -0.1 45,374 - MPMX19_04658 0.33 -2.0 45,374 - MPMX19_04658 0.33 +1.3 45,374 - MPMX19_04658 0.33 -1.7 45,374 - MPMX19_04658 0.33 +2.7 45,374 - MPMX19_04658 0.33 +0.7 45,374 - MPMX19_04658 0.33 -1.7 45,374 - MPMX19_04658 0.33 -1.0 45,374 - MPMX19_04658 0.33 -0.4 45,374 - MPMX19_04658 0.33 +0.1 45,374 - MPMX19_04658 0.33 +0.3 45,374 - MPMX19_04658 0.33 -0.4 45,374 - MPMX19_04658 0.33 -0.4 45,374 - MPMX19_04658 0.33 +0.6 45,374 - MPMX19_04658 0.33 +1.3 45,374 - MPMX19_04658 0.33 +0.3 45,374 - MPMX19_04658 0.33 -1.3 45,374 - MPMX19_04658 0.33 -0.3 45,374 - MPMX19_04658 0.33 -0.7 45,374 - MPMX19_04658 0.33 +0.3 45,374 - MPMX19_04658 0.33 +0.4 45,374 - MPMX19_04658 0.33 +0.1 45,374 - MPMX19_04658 0.33 +0.1 45,374 - MPMX19_04658 0.33 -1.2 45,374 - MPMX19_04658 0.33 -0.4 45,374 - MPMX19_04658 0.33 +0.2 45,374 - MPMX19_04658 0.33 -0.8 45,469 + MPMX19_04658 0.40 -1.1 45,469 + MPMX19_04658 0.40 -0.1 45,469 + MPMX19_04658 0.40 -1.1 45,470 - MPMX19_04658 0.40 -0.3 45,470 - MPMX19_04658 0.40 -1.6 45,470 - MPMX19_04658 0.40 -0.5 45,496 + MPMX19_04658 0.42 +0.2 45,496 + MPMX19_04658 0.42 -1.3 45,496 + MPMX19_04658 0.42 +0.8 45,496 + MPMX19_04658 0.42 -0.7 45,496 + MPMX19_04658 0.42 -1.5 45,496 + MPMX19_04658 0.42 -0.7 45,497 - MPMX19_04658 0.42 +0.5 45,497 - MPMX19_04658 0.42 -0.2 45,497 - MPMX19_04658 0.42 +0.7 45,497 - MPMX19_04658 0.42 -1.3 45,497 - MPMX19_04658 0.42 -0.7 45,497 - MPMX19_04658 0.42 +0.9 45,667 + MPMX19_04658 0.54 +1.1 45,667 + MPMX19_04658 0.54 +0.8 45,667 + MPMX19_04658 0.54 -0.5 45,880 + MPMX19_04658 0.69 +0.3
Or see this region's nucleotide sequence