Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_04463 and MPMX19_04464 are separated by 79 nucleotides MPMX19_04464 and MPMX19_04465 are separated by 201 nucleotides MPMX19_04465 and MPMX19_04466 are separated by 168 nucleotides MPMX19_04466 and MPMX19_04467 are separated by 216 nucleotides MPMX19_04467 and MPMX19_04468 are separated by 206 nucleotides
MPMX19_04463: MPMX19_04463 - Oxalate:formate antiporter, at 830,643 to 831,950
_04463
MPMX19_04464: MPMX19_04464 - hypothetical protein, at 832,030 to 832,440
_04464
MPMX19_04465: MPMX19_04465 - Pantothenate synthetase, at 832,642 to 833,550
_04465
MPMX19_04466: MPMX19_04466 - hypothetical protein, at 833,719 to 833,883
_04466
MPMX19_04467: MPMX19_04467 - tRNA-Val, at 834,100 to 834,174
_04467
MPMX19_04468: MPMX19_04468 - hypothetical protein, at 834,381 to 835,286
_04468
Position (kb) 832
833
834 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 831.738 kb on + strand, within MPMX19_04463 at 831.738 kb on + strand, within MPMX19_04463 at 831.738 kb on + strand, within MPMX19_04463 at 831.738 kb on + strand, within MPMX19_04463 at 831.739 kb on - strand, within MPMX19_04463 at 831.739 kb on - strand, within MPMX19_04463 at 831.739 kb on - strand, within MPMX19_04463 at 831.822 kb on + strand at 831.822 kb on + strand at 831.822 kb on + strand at 831.822 kb on + strand at 831.823 kb on - strand at 831.823 kb on - strand at 831.823 kb on - strand at 831.823 kb on - strand at 831.823 kb on - strand at 831.894 kb on + strand at 831.894 kb on + strand at 831.894 kb on + strand at 831.895 kb on - strand at 831.895 kb on - strand at 831.895 kb on - strand at 831.895 kb on - strand at 831.962 kb on + strand at 831.962 kb on + strand at 831.962 kb on + strand at 831.962 kb on + strand at 831.962 kb on + strand at 831.962 kb on + strand at 831.962 kb on + strand at 831.963 kb on - strand at 831.963 kb on - strand at 831.963 kb on - strand at 831.963 kb on - strand at 831.963 kb on - strand at 831.963 kb on - strand at 831.963 kb on - strand at 832.031 kb on + strand at 832.031 kb on + strand at 832.031 kb on + strand at 832.031 kb on + strand at 832.205 kb on + strand, within MPMX19_04464 at 832.205 kb on + strand, within MPMX19_04464 at 832.205 kb on + strand, within MPMX19_04464 at 832.205 kb on + strand, within MPMX19_04464 at 832.205 kb on + strand, within MPMX19_04464 at 832.205 kb on + strand, within MPMX19_04464 at 832.205 kb on + strand, within MPMX19_04464 at 832.205 kb on + strand, within MPMX19_04464 at 832.205 kb on + strand, within MPMX19_04464 at 832.205 kb on + strand, within MPMX19_04464 at 832.205 kb on + strand, within MPMX19_04464 at 832.205 kb on + strand, within MPMX19_04464 at 832.205 kb on + strand, within MPMX19_04464 at 832.205 kb on + strand, within MPMX19_04464 at 832.205 kb on + strand, within MPMX19_04464 at 832.206 kb on - strand, within MPMX19_04464 at 832.206 kb on - strand, within MPMX19_04464 at 832.206 kb on - strand, within MPMX19_04464 at 832.206 kb on - strand, within MPMX19_04464 at 832.206 kb on - strand, within MPMX19_04464 at 832.206 kb on - strand, within MPMX19_04464 at 832.206 kb on - strand, within MPMX19_04464 at 832.206 kb on - strand, within MPMX19_04464 at 832.206 kb on - strand, within MPMX19_04464 at 832.206 kb on - strand, within MPMX19_04464 at 832.206 kb on - strand, within MPMX19_04464 at 832.206 kb on - strand, within MPMX19_04464 at 832.319 kb on + strand, within MPMX19_04464 at 832.319 kb on + strand, within MPMX19_04464 at 832.319 kb on + strand, within MPMX19_04464 at 832.319 kb on + strand, within MPMX19_04464 at 832.320 kb on - strand, within MPMX19_04464 at 832.320 kb on - strand, within MPMX19_04464 at 832.320 kb on - strand, within MPMX19_04464 at 832.320 kb on - strand, within MPMX19_04464 at 832.320 kb on - strand, within MPMX19_04464 at 832.379 kb on + strand, within MPMX19_04464 at 832.379 kb on + strand, within MPMX19_04464 at 832.379 kb on + strand, within MPMX19_04464 at 832.379 kb on + strand, within MPMX19_04464 at 832.379 kb on + strand, within MPMX19_04464 at 832.379 kb on + strand, within MPMX19_04464 at 832.379 kb on + strand, within MPMX19_04464 at 832.379 kb on + strand, within MPMX19_04464 at 832.379 kb on + strand, within MPMX19_04464 at 832.379 kb on + strand, within MPMX19_04464 at 832.379 kb on + strand, within MPMX19_04464 at 832.379 kb on + strand, within MPMX19_04464 at 832.379 kb on + strand, within MPMX19_04464 at 832.379 kb on + strand, within MPMX19_04464 at 832.379 kb on + strand, within MPMX19_04464 at 832.379 kb on + strand, within MPMX19_04464 at 832.379 kb on + strand, within MPMX19_04464 at 832.379 kb on + strand, within MPMX19_04464 at 832.379 kb on + strand, within MPMX19_04464 at 832.379 kb on + strand, within MPMX19_04464 at 832.379 kb on + strand, within MPMX19_04464 at 832.380 kb on - strand, within MPMX19_04464 at 832.380 kb on - strand, within MPMX19_04464 at 832.380 kb on - strand, within MPMX19_04464 at 832.380 kb on - strand, within MPMX19_04464 at 832.380 kb on - strand, within MPMX19_04464 at 832.380 kb on - strand, within MPMX19_04464 at 832.380 kb on - strand, within MPMX19_04464 at 832.380 kb on - strand, within MPMX19_04464 at 832.380 kb on - strand, within MPMX19_04464 at 832.380 kb on - strand, within MPMX19_04464 at 832.380 kb on - strand, within MPMX19_04464 at 832.380 kb on - strand, within MPMX19_04464 at 832.380 kb on - strand, within MPMX19_04464 at 832.380 kb on - strand, within MPMX19_04464 at 832.380 kb on - strand, within MPMX19_04464 at 832.380 kb on - strand, within MPMX19_04464 at 832.380 kb on - strand, within MPMX19_04464 at 832.380 kb on - strand, within MPMX19_04464 at 832.552 kb on + strand at 832.552 kb on + strand at 832.552 kb on + strand at 832.552 kb on + strand at 832.552 kb on + strand at 832.553 kb on - strand at 832.553 kb on - strand at 832.553 kb on - strand at 832.553 kb on - strand at 832.553 kb on - strand at 832.553 kb on - strand at 832.553 kb on - strand at 832.553 kb on - strand at 832.553 kb on - strand at 832.553 kb on - strand at 832.553 kb on - strand at 832.553 kb on - strand at 832.620 kb on + strand at 832.621 kb on - strand at 832.621 kb on - strand at 832.621 kb on - strand at 832.621 kb on - strand at 832.772 kb on + strand, within MPMX19_04465 at 832.772 kb on + strand, within MPMX19_04465 at 832.772 kb on + strand, within MPMX19_04465 at 832.772 kb on + strand, within MPMX19_04465 at 832.772 kb on + strand, within MPMX19_04465 at 832.772 kb on + strand, within MPMX19_04465 at 832.772 kb on + strand, within MPMX19_04465 at 832.772 kb on + strand, within MPMX19_04465 at 832.772 kb on + strand, within MPMX19_04465 at 832.772 kb on + strand, within MPMX19_04465 at 832.773 kb on - strand, within MPMX19_04465 at 832.773 kb on - strand, within MPMX19_04465 at 832.773 kb on - strand, within MPMX19_04465 at 832.773 kb on - strand, within MPMX19_04465 at 832.773 kb on - strand, within MPMX19_04465 at 832.773 kb on - strand, within MPMX19_04465 at 832.773 kb on - strand, within MPMX19_04465 at 832.773 kb on - strand, within MPMX19_04465 at 832.773 kb on - strand, within MPMX19_04465 at 832.773 kb on - strand, within MPMX19_04465 at 832.773 kb on - strand, within MPMX19_04465 at 832.773 kb on - strand, within MPMX19_04465 at 832.773 kb on - strand, within MPMX19_04465 at 832.780 kb on - strand, within MPMX19_04465 at 832.922 kb on + strand, within MPMX19_04465 at 832.922 kb on + strand, within MPMX19_04465 at 832.922 kb on + strand, within MPMX19_04465 at 832.922 kb on + strand, within MPMX19_04465 at 832.922 kb on + strand, within MPMX19_04465 at 832.922 kb on + strand, within MPMX19_04465 at 832.922 kb on + strand, within MPMX19_04465 at 832.923 kb on - strand, within MPMX19_04465 at 832.923 kb on - strand, within MPMX19_04465 at 832.923 kb on - strand, within MPMX19_04465 at 832.923 kb on - strand, within MPMX19_04465 at 832.923 kb on - strand, within MPMX19_04465 at 833.039 kb on + strand, within MPMX19_04465 at 833.039 kb on + strand, within MPMX19_04465 at 833.039 kb on + strand, within MPMX19_04465 at 833.039 kb on + strand, within MPMX19_04465 at 833.040 kb on - strand, within MPMX19_04465 at 833.040 kb on - strand, within MPMX19_04465 at 833.040 kb on - strand, within MPMX19_04465 at 833.195 kb on + strand, within MPMX19_04465 at 833.195 kb on + strand, within MPMX19_04465 at 833.195 kb on + strand, within MPMX19_04465 at 833.195 kb on + strand, within MPMX19_04465 at 833.195 kb on + strand, within MPMX19_04465 at 833.195 kb on + strand, within MPMX19_04465 at 833.195 kb on + strand, within MPMX19_04465 at 833.196 kb on - strand, within MPMX19_04465 at 833.196 kb on - strand, within MPMX19_04465 at 833.196 kb on - strand, within MPMX19_04465 at 833.196 kb on - strand, within MPMX19_04465 at 833.196 kb on - strand, within MPMX19_04465 at 833.196 kb on - strand, within MPMX19_04465 at 833.196 kb on - strand, within MPMX19_04465 at 833.196 kb on - strand, within MPMX19_04465 at 833.219 kb on + strand, within MPMX19_04465 at 833.219 kb on + strand, within MPMX19_04465 at 833.219 kb on + strand, within MPMX19_04465 at 833.220 kb on - strand, within MPMX19_04465 at 833.635 kb on + strand at 833.636 kb on - strand at 833.636 kb on - strand at 833.636 kb on - strand at 833.646 kb on + strand at 833.646 kb on + strand at 833.646 kb on + strand at 833.646 kb on + strand at 833.646 kb on + strand at 833.647 kb on - strand at 833.647 kb on - strand at 833.647 kb on - strand at 833.647 kb on - strand at 833.727 kb on + strand at 833.747 kb on + strand, within MPMX19_04466 at 833.747 kb on + strand, within MPMX19_04466 at 833.748 kb on + strand, within MPMX19_04466 at 833.748 kb on - strand, within MPMX19_04466 at 833.748 kb on - strand, within MPMX19_04466 at 833.748 kb on - strand, within MPMX19_04466 at 833.748 kb on - strand, within MPMX19_04466 at 833.748 kb on - strand, within MPMX19_04466 at 833.748 kb on - strand, within MPMX19_04466 at 833.874 kb on + strand at 833.928 kb on + strand at 833.928 kb on + strand at 833.929 kb on - strand at 833.929 kb on - strand at 833.929 kb on - strand at 833.929 kb on - strand at 833.929 kb on - strand at 833.929 kb on - strand at 833.933 kb on + strand at 833.933 kb on + strand at 833.933 kb on + strand at 833.934 kb on - strand at 833.934 kb on - strand at 833.934 kb on - strand at 833.934 kb on - strand at 833.934 kb on - strand at 833.934 kb on - strand at 833.934 kb on - strand at 833.934 kb on - strand at 833.990 kb on + strand at 833.990 kb on + strand at 833.991 kb on - strand at 833.991 kb on - strand at 834.098 kb on - strand at 834.098 kb on - strand at 834.098 kb on - strand at 834.300 kb on + strand at 834.301 kb on - strand at 834.301 kb on - strand at 834.301 kb on - strand at 834.531 kb on + strand, within MPMX19_04468 at 834.532 kb on - strand, within MPMX19_04468 at 834.532 kb on - strand, within MPMX19_04468 at 834.532 kb on - strand, within MPMX19_04468 at 834.532 kb on - strand, within MPMX19_04468
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 831,738 + MPMX19_04463 0.84 -0.0 831,738 + MPMX19_04463 0.84 -1.0 831,738 + MPMX19_04463 0.84 -1.2 831,738 + MPMX19_04463 0.84 +0.1 831,739 - MPMX19_04463 0.84 +0.4 831,739 - MPMX19_04463 0.84 -0.8 831,739 - MPMX19_04463 0.84 -1.0 831,822 + -0.2 831,822 + -0.5 831,822 + +0.5 831,822 + -0.3 831,823 - -1.6 831,823 - +1.2 831,823 - +0.8 831,823 - -0.3 831,823 - -1.6 831,894 + -2.0 831,894 + +0.8 831,894 + +0.4 831,895 - -0.6 831,895 - +0.1 831,895 - -0.8 831,895 - -2.2 831,962 + -0.6 831,962 + -0.9 831,962 + -0.9 831,962 + -0.5 831,962 + -2.1 831,962 + -0.3 831,962 + -0.0 831,963 - +0.5 831,963 - -0.1 831,963 - -0.4 831,963 - -0.6 831,963 - +0.8 831,963 - -0.8 831,963 - +0.4 832,031 + +0.2 832,031 + -0.5 832,031 + +0.6 832,031 + -1.2 832,205 + MPMX19_04464 0.43 +0.7 832,205 + MPMX19_04464 0.43 -0.2 832,205 + MPMX19_04464 0.43 -0.1 832,205 + MPMX19_04464 0.43 -0.5 832,205 + MPMX19_04464 0.43 -0.4 832,205 + MPMX19_04464 0.43 -1.8 832,205 + MPMX19_04464 0.43 +0.8 832,205 + MPMX19_04464 0.43 -1.3 832,205 + MPMX19_04464 0.43 -0.6 832,205 + MPMX19_04464 0.43 -0.2 832,205 + MPMX19_04464 0.43 -0.7 832,205 + MPMX19_04464 0.43 +0.1 832,205 + MPMX19_04464 0.43 -1.9 832,205 + MPMX19_04464 0.43 -0.3 832,205 + MPMX19_04464 0.43 -0.5 832,206 - MPMX19_04464 0.43 -0.9 832,206 - MPMX19_04464 0.43 -1.7 832,206 - MPMX19_04464 0.43 -1.2 832,206 - MPMX19_04464 0.43 +0.4 832,206 - MPMX19_04464 0.43 -0.1 832,206 - MPMX19_04464 0.43 +0.2 832,206 - MPMX19_04464 0.43 +0.4 832,206 - MPMX19_04464 0.43 +0.0 832,206 - MPMX19_04464 0.43 -0.0 832,206 - MPMX19_04464 0.43 +0.6 832,206 - MPMX19_04464 0.43 -1.1 832,206 - MPMX19_04464 0.43 +0.0 832,319 + MPMX19_04464 0.70 +0.2 832,319 + MPMX19_04464 0.70 -0.6 832,319 + MPMX19_04464 0.70 -0.8 832,319 + MPMX19_04464 0.70 -1.7 832,320 - MPMX19_04464 0.71 +0.7 832,320 - MPMX19_04464 0.71 -1.3 832,320 - MPMX19_04464 0.71 -0.1 832,320 - MPMX19_04464 0.71 -0.7 832,320 - MPMX19_04464 0.71 -1.2 832,379 + MPMX19_04464 0.85 -0.5 832,379 + MPMX19_04464 0.85 -0.7 832,379 + MPMX19_04464 0.85 +0.4 832,379 + MPMX19_04464 0.85 -1.2 832,379 + MPMX19_04464 0.85 +0.5 832,379 + MPMX19_04464 0.85 -2.6 832,379 + MPMX19_04464 0.85 -1.7 832,379 + MPMX19_04464 0.85 -0.5 832,379 + MPMX19_04464 0.85 +0.8 832,379 + MPMX19_04464 0.85 -1.0 832,379 + MPMX19_04464 0.85 -0.4 832,379 + MPMX19_04464 0.85 +0.3 832,379 + MPMX19_04464 0.85 -1.5 832,379 + MPMX19_04464 0.85 +0.4 832,379 + MPMX19_04464 0.85 -0.6 832,379 + MPMX19_04464 0.85 +0.6 832,379 + MPMX19_04464 0.85 +0.1 832,379 + MPMX19_04464 0.85 -1.6 832,379 + MPMX19_04464 0.85 +0.3 832,379 + MPMX19_04464 0.85 -1.3 832,379 + MPMX19_04464 0.85 +0.2 832,380 - MPMX19_04464 0.85 -1.0 832,380 - MPMX19_04464 0.85 -1.4 832,380 - MPMX19_04464 0.85 +0.6 832,380 - MPMX19_04464 0.85 +1.0 832,380 - MPMX19_04464 0.85 +0.4 832,380 - MPMX19_04464 0.85 +0.0 832,380 - MPMX19_04464 0.85 -1.8 832,380 - MPMX19_04464 0.85 -1.2 832,380 - MPMX19_04464 0.85 -0.2 832,380 - MPMX19_04464 0.85 +0.2 832,380 - MPMX19_04464 0.85 +1.2 832,380 - MPMX19_04464 0.85 -0.2 832,380 - MPMX19_04464 0.85 +1.8 832,380 - MPMX19_04464 0.85 -0.5 832,380 - MPMX19_04464 0.85 -0.5 832,380 - MPMX19_04464 0.85 -0.1 832,380 - MPMX19_04464 0.85 -0.8 832,380 - MPMX19_04464 0.85 -0.9 832,552 + -0.2 832,552 + -0.9 832,552 + +0.4 832,552 + -1.1 832,552 + +0.7 832,553 - -1.1 832,553 - +0.2 832,553 - -0.1 832,553 - +1.2 832,553 - -0.7 832,553 - -0.8 832,553 - +0.1 832,553 - -1.6 832,553 - -1.1 832,553 - +0.1 832,553 - -1.0 832,553 - +1.5 832,620 + -0.1 832,621 - -0.8 832,621 - -0.2 832,621 - +0.3 832,621 - +0.0 832,772 + MPMX19_04465 0.14 -0.7 832,772 + MPMX19_04465 0.14 -0.2 832,772 + MPMX19_04465 0.14 +0.3 832,772 + MPMX19_04465 0.14 +0.3 832,772 + MPMX19_04465 0.14 -1.6 832,772 + MPMX19_04465 0.14 -1.0 832,772 + MPMX19_04465 0.14 -0.8 832,772 + MPMX19_04465 0.14 -0.2 832,772 + MPMX19_04465 0.14 +0.2 832,772 + MPMX19_04465 0.14 +0.2 832,773 - MPMX19_04465 0.14 -1.9 832,773 - MPMX19_04465 0.14 -0.9 832,773 - MPMX19_04465 0.14 -1.5 832,773 - MPMX19_04465 0.14 -0.1 832,773 - MPMX19_04465 0.14 -1.2 832,773 - MPMX19_04465 0.14 -2.5 832,773 - MPMX19_04465 0.14 -0.2 832,773 - MPMX19_04465 0.14 -1.4 832,773 - MPMX19_04465 0.14 -0.5 832,773 - MPMX19_04465 0.14 +0.6 832,773 - MPMX19_04465 0.14 -0.5 832,773 - MPMX19_04465 0.14 -0.4 832,773 - MPMX19_04465 0.14 -0.5 832,780 - MPMX19_04465 0.15 +0.0 832,922 + MPMX19_04465 0.31 +1.1 832,922 + MPMX19_04465 0.31 +0.2 832,922 + MPMX19_04465 0.31 -0.6 832,922 + MPMX19_04465 0.31 -1.6 832,922 + MPMX19_04465 0.31 -0.4 832,922 + MPMX19_04465 0.31 -0.8 832,922 + MPMX19_04465 0.31 -0.1 832,923 - MPMX19_04465 0.31 -0.1 832,923 - MPMX19_04465 0.31 -0.4 832,923 - MPMX19_04465 0.31 +0.1 832,923 - MPMX19_04465 0.31 +0.8 832,923 - MPMX19_04465 0.31 +0.5 833,039 + MPMX19_04465 0.44 -1.0 833,039 + MPMX19_04465 0.44 -0.1 833,039 + MPMX19_04465 0.44 -0.2 833,039 + MPMX19_04465 0.44 -0.8 833,040 - MPMX19_04465 0.44 +0.4 833,040 - MPMX19_04465 0.44 -0.6 833,040 - MPMX19_04465 0.44 -0.9 833,195 + MPMX19_04465 0.61 -0.9 833,195 + MPMX19_04465 0.61 +0.4 833,195 + MPMX19_04465 0.61 -0.2 833,195 + MPMX19_04465 0.61 +0.4 833,195 + MPMX19_04465 0.61 -0.1 833,195 + MPMX19_04465 0.61 +0.2 833,195 + MPMX19_04465 0.61 -0.9 833,196 - MPMX19_04465 0.61 +0.5 833,196 - MPMX19_04465 0.61 +0.2 833,196 - MPMX19_04465 0.61 +0.0 833,196 - MPMX19_04465 0.61 -0.3 833,196 - MPMX19_04465 0.61 -1.1 833,196 - MPMX19_04465 0.61 -0.9 833,196 - MPMX19_04465 0.61 -0.4 833,196 - MPMX19_04465 0.61 -1.0 833,219 + MPMX19_04465 0.63 -0.2 833,219 + MPMX19_04465 0.63 +2.2 833,219 + MPMX19_04465 0.63 -0.0 833,220 - MPMX19_04465 0.64 -0.2 833,635 + -0.9 833,636 - -0.8 833,636 - -1.2 833,636 - -2.9 833,646 + -0.6 833,646 + -0.0 833,646 + -0.9 833,646 + -1.8 833,646 + -1.0 833,647 - -1.2 833,647 - -1.8 833,647 - -1.4 833,647 - -0.8 833,727 + -0.2 833,747 + MPMX19_04466 0.17 +0.3 833,747 + MPMX19_04466 0.17 -0.2 833,748 + MPMX19_04466 0.18 +0.9 833,748 - MPMX19_04466 0.18 -1.5 833,748 - MPMX19_04466 0.18 +0.2 833,748 - MPMX19_04466 0.18 -0.7 833,748 - MPMX19_04466 0.18 -0.1 833,748 - MPMX19_04466 0.18 -1.0 833,748 - MPMX19_04466 0.18 +0.2 833,874 + -0.8 833,928 + +0.6 833,928 + +0.4 833,929 - +0.1 833,929 - -1.5 833,929 - -0.9 833,929 - -1.4 833,929 - +1.0 833,929 - +0.4 833,933 + +0.2 833,933 + -0.3 833,933 + +0.8 833,934 - -0.2 833,934 - -0.4 833,934 - -1.7 833,934 - -1.7 833,934 - -0.6 833,934 - -0.2 833,934 - +0.3 833,934 - -0.3 833,990 + +0.4 833,990 + +0.2 833,991 - +0.5 833,991 - +0.1 834,098 - +0.3 834,098 - -0.4 834,098 - -1.2 834,300 + -0.0 834,301 - -1.8 834,301 - -1.2 834,301 - +0.1 834,531 + MPMX19_04468 0.17 -1.6 834,532 - MPMX19_04468 0.17 -2.6 834,532 - MPMX19_04468 0.17 +1.2 834,532 - MPMX19_04468 0.17 +0.1 834,532 - MPMX19_04468 0.17 -2.3
Or see this region's nucleotide sequence