Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_04406 and MPMX19_04407 are separated by 117 nucleotides MPMX19_04407 and MPMX19_04408 overlap by 4 nucleotides MPMX19_04408 and MPMX19_04409 are separated by 60 nucleotides MPMX19_04409 and MPMX19_04410 are separated by 13 nucleotides
MPMX19_04406: MPMX19_04406 - Octaprenyl diphosphate synthase, at 770,711 to 771,727
_04406
MPMX19_04407: MPMX19_04407 - hypothetical protein, at 771,845 to 772,051
_04407
MPMX19_04408: MPMX19_04408 - tRNA1(Val) (adenine(37)-N6)-methyltransferase, at 772,048 to 772,818
_04408
MPMX19_04409: MPMX19_04409 - hypothetical protein, at 772,879 to 773,769
_04409
MPMX19_04410: MPMX19_04410 - Oxalate:formate antiporter, at 773,783 to 775,078
_04410
Position (kb) 772
773 Strain fitness (log2 ratio) -2
-1
0
1 at 771.783 kb on - strand at 771.783 kb on - strand at 771.783 kb on - strand at 771.815 kb on - strand at 771.941 kb on + strand, within MPMX19_04407 at 771.941 kb on + strand, within MPMX19_04407 at 771.941 kb on + strand, within MPMX19_04407 at 771.941 kb on + strand, within MPMX19_04407 at 771.941 kb on + strand, within MPMX19_04407 at 771.941 kb on + strand, within MPMX19_04407 at 771.941 kb on + strand, within MPMX19_04407 at 771.941 kb on + strand, within MPMX19_04407 at 771.941 kb on + strand, within MPMX19_04407 at 771.941 kb on + strand, within MPMX19_04407 at 771.941 kb on + strand, within MPMX19_04407 at 771.941 kb on + strand, within MPMX19_04407 at 771.941 kb on + strand, within MPMX19_04407 at 771.941 kb on + strand, within MPMX19_04407 at 771.941 kb on + strand, within MPMX19_04407 at 771.941 kb on + strand, within MPMX19_04407 at 771.941 kb on + strand, within MPMX19_04407 at 771.941 kb on + strand, within MPMX19_04407 at 771.941 kb on + strand, within MPMX19_04407 at 771.941 kb on + strand, within MPMX19_04407 at 771.941 kb on + strand, within MPMX19_04407 at 771.941 kb on + strand, within MPMX19_04407 at 771.941 kb on + strand, within MPMX19_04407 at 771.941 kb on + strand, within MPMX19_04407 at 771.941 kb on + strand, within MPMX19_04407 at 771.941 kb on + strand, within MPMX19_04407 at 771.941 kb on + strand, within MPMX19_04407 at 771.942 kb on - strand, within MPMX19_04407 at 771.942 kb on - strand, within MPMX19_04407 at 771.942 kb on - strand, within MPMX19_04407 at 771.942 kb on - strand, within MPMX19_04407 at 771.942 kb on - strand, within MPMX19_04407 at 771.942 kb on - strand, within MPMX19_04407 at 771.942 kb on - strand, within MPMX19_04407 at 771.942 kb on - strand, within MPMX19_04407 at 771.942 kb on - strand, within MPMX19_04407 at 771.942 kb on - strand, within MPMX19_04407 at 771.942 kb on - strand, within MPMX19_04407 at 771.942 kb on - strand, within MPMX19_04407 at 771.942 kb on - strand, within MPMX19_04407 at 771.942 kb on - strand, within MPMX19_04407 at 771.942 kb on - strand, within MPMX19_04407 at 771.942 kb on - strand, within MPMX19_04407 at 771.942 kb on - strand, within MPMX19_04407 at 771.942 kb on - strand, within MPMX19_04407 at 771.942 kb on - strand, within MPMX19_04407 at 771.942 kb on - strand, within MPMX19_04407 at 771.942 kb on - strand, within MPMX19_04407 at 771.942 kb on - strand, within MPMX19_04407 at 771.942 kb on - strand, within MPMX19_04407 at 771.942 kb on - strand, within MPMX19_04407 at 771.942 kb on - strand, within MPMX19_04407 at 771.997 kb on + strand, within MPMX19_04407 at 772.147 kb on + strand, within MPMX19_04408 at 772.441 kb on + strand, within MPMX19_04408 at 772.441 kb on + strand, within MPMX19_04408 at 772.442 kb on - strand, within MPMX19_04408 at 772.765 kb on + strand at 772.765 kb on + strand at 772.765 kb on + strand at 772.765 kb on + strand at 772.765 kb on + strand at 772.766 kb on - strand at 772.816 kb on + strand at 772.816 kb on + strand at 773.326 kb on + strand, within MPMX19_04409 at 773.326 kb on + strand, within MPMX19_04409 at 773.326 kb on + strand, within MPMX19_04409 at 773.326 kb on + strand, within MPMX19_04409 at 773.326 kb on + strand, within MPMX19_04409 at 773.327 kb on - strand, within MPMX19_04409 at 773.327 kb on - strand, within MPMX19_04409 at 773.327 kb on - strand, within MPMX19_04409 at 773.327 kb on - strand, within MPMX19_04409
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 771,783 - -1.2 771,783 - -0.3 771,783 - -0.8 771,815 - -0.5 771,941 + MPMX19_04407 0.46 +0.3 771,941 + MPMX19_04407 0.46 -0.2 771,941 + MPMX19_04407 0.46 -0.1 771,941 + MPMX19_04407 0.46 -0.8 771,941 + MPMX19_04407 0.46 +0.6 771,941 + MPMX19_04407 0.46 +0.2 771,941 + MPMX19_04407 0.46 -0.4 771,941 + MPMX19_04407 0.46 +0.7 771,941 + MPMX19_04407 0.46 -2.3 771,941 + MPMX19_04407 0.46 +1.1 771,941 + MPMX19_04407 0.46 -0.1 771,941 + MPMX19_04407 0.46 +1.1 771,941 + MPMX19_04407 0.46 -0.7 771,941 + MPMX19_04407 0.46 +0.8 771,941 + MPMX19_04407 0.46 +0.5 771,941 + MPMX19_04407 0.46 -0.7 771,941 + MPMX19_04407 0.46 -0.2 771,941 + MPMX19_04407 0.46 +0.2 771,941 + MPMX19_04407 0.46 -0.0 771,941 + MPMX19_04407 0.46 -1.0 771,941 + MPMX19_04407 0.46 -0.9 771,941 + MPMX19_04407 0.46 -0.2 771,941 + MPMX19_04407 0.46 -2.2 771,941 + MPMX19_04407 0.46 -0.2 771,941 + MPMX19_04407 0.46 -1.0 771,941 + MPMX19_04407 0.46 -0.6 771,941 + MPMX19_04407 0.46 -0.7 771,942 - MPMX19_04407 0.47 -2.3 771,942 - MPMX19_04407 0.47 -0.6 771,942 - MPMX19_04407 0.47 -0.1 771,942 - MPMX19_04407 0.47 -0.8 771,942 - MPMX19_04407 0.47 -0.4 771,942 - MPMX19_04407 0.47 -0.3 771,942 - MPMX19_04407 0.47 -1.9 771,942 - MPMX19_04407 0.47 +0.4 771,942 - MPMX19_04407 0.47 -0.5 771,942 - MPMX19_04407 0.47 -1.3 771,942 - MPMX19_04407 0.47 -0.7 771,942 - MPMX19_04407 0.47 +0.5 771,942 - MPMX19_04407 0.47 -0.8 771,942 - MPMX19_04407 0.47 -0.5 771,942 - MPMX19_04407 0.47 +0.3 771,942 - MPMX19_04407 0.47 -0.8 771,942 - MPMX19_04407 0.47 -0.3 771,942 - MPMX19_04407 0.47 -1.5 771,942 - MPMX19_04407 0.47 -2.4 771,942 - MPMX19_04407 0.47 -0.5 771,942 - MPMX19_04407 0.47 +0.4 771,942 - MPMX19_04407 0.47 +1.0 771,942 - MPMX19_04407 0.47 -2.0 771,942 - MPMX19_04407 0.47 -0.7 771,942 - MPMX19_04407 0.47 -0.9 771,997 + MPMX19_04407 0.73 +0.3 772,147 + MPMX19_04408 0.13 -1.8 772,441 + MPMX19_04408 0.51 -0.4 772,441 + MPMX19_04408 0.51 -0.9 772,442 - MPMX19_04408 0.51 +0.1 772,765 + +0.5 772,765 + -1.0 772,765 + -1.0 772,765 + -1.2 772,765 + -0.4 772,766 - -0.6 772,816 + +0.1 772,816 + +0.8 773,326 + MPMX19_04409 0.50 -0.2 773,326 + MPMX19_04409 0.50 -1.5 773,326 + MPMX19_04409 0.50 -1.7 773,326 + MPMX19_04409 0.50 +0.2 773,326 + MPMX19_04409 0.50 +0.2 773,327 - MPMX19_04409 0.50 +1.2 773,327 - MPMX19_04409 0.50 +0.4 773,327 - MPMX19_04409 0.50 -0.9 773,327 - MPMX19_04409 0.50 +0.5
Or see this region's nucleotide sequence