Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_04329 and MPMX19_04330 are separated by 192 nucleotides MPMX19_04330 and MPMX19_04331 are separated by 36 nucleotides MPMX19_04331 and MPMX19_04332 are separated by 130 nucleotides MPMX19_04332 and MPMX19_04333 are separated by 85 nucleotides
MPMX19_04329: MPMX19_04329 - Deoxyguanosinetriphosphate triphosphohydrolase-like protein, at 693,739 to 694,938
_04329
MPMX19_04330: MPMX19_04330 - Iron-sulfur cluster insertion protein ErpA, at 695,131 to 695,487
_04330
MPMX19_04331: MPMX19_04331 - Exodeoxyribonuclease, at 695,524 to 696,297
_04331
MPMX19_04332: MPMX19_04332 - hypothetical protein, at 696,428 to 697,000
_04332
MPMX19_04333: MPMX19_04333 - tRNA-Ser, at 697,086 to 697,175
_04333
Position (kb)
695
696
697 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 694.740 kb on - strand, within MPMX19_04329 at 694.743 kb on - strand, within MPMX19_04329 at 694.743 kb on - strand, within MPMX19_04329 at 694.743 kb on - strand, within MPMX19_04329 at 694.758 kb on - strand, within MPMX19_04329 at 694.758 kb on - strand, within MPMX19_04329 at 694.758 kb on - strand, within MPMX19_04329 at 694.951 kb on - strand at 694.990 kb on - strand at 694.990 kb on - strand at 694.990 kb on - strand at 694.990 kb on - strand at 694.990 kb on - strand at 694.990 kb on - strand at 694.990 kb on - strand at 694.990 kb on - strand at 694.990 kb on - strand at 694.990 kb on - strand at 695.060 kb on + strand at 695.060 kb on + strand at 695.060 kb on + strand at 695.060 kb on + strand at 695.060 kb on + strand at 695.060 kb on + strand at 695.060 kb on + strand at 695.060 kb on + strand at 695.060 kb on + strand at 695.061 kb on - strand at 695.061 kb on - strand at 695.061 kb on - strand at 695.061 kb on - strand at 695.061 kb on - strand at 695.061 kb on - strand at 695.061 kb on - strand at 695.087 kb on + strand at 695.087 kb on + strand at 695.087 kb on + strand at 695.087 kb on + strand at 695.087 kb on + strand at 695.087 kb on + strand at 695.087 kb on + strand at 695.087 kb on + strand at 695.087 kb on + strand at 695.088 kb on - strand at 695.088 kb on - strand at 695.677 kb on + strand, within MPMX19_04331 at 695.707 kb on + strand, within MPMX19_04331 at 695.707 kb on + strand, within MPMX19_04331 at 695.707 kb on + strand, within MPMX19_04331 at 695.707 kb on + strand, within MPMX19_04331 at 695.707 kb on + strand, within MPMX19_04331 at 695.707 kb on + strand, within MPMX19_04331 at 695.707 kb on + strand, within MPMX19_04331 at 695.707 kb on + strand, within MPMX19_04331 at 695.707 kb on + strand, within MPMX19_04331 at 695.707 kb on + strand, within MPMX19_04331 at 695.707 kb on + strand, within MPMX19_04331 at 695.707 kb on + strand, within MPMX19_04331 at 695.708 kb on - strand, within MPMX19_04331 at 695.708 kb on - strand, within MPMX19_04331 at 695.708 kb on - strand, within MPMX19_04331 at 695.708 kb on - strand, within MPMX19_04331 at 695.708 kb on - strand, within MPMX19_04331 at 695.708 kb on - strand, within MPMX19_04331 at 695.708 kb on - strand, within MPMX19_04331 at 695.708 kb on - strand, within MPMX19_04331 at 695.708 kb on - strand, within MPMX19_04331 at 695.794 kb on + strand, within MPMX19_04331 at 695.794 kb on + strand, within MPMX19_04331 at 695.794 kb on + strand, within MPMX19_04331 at 695.794 kb on + strand, within MPMX19_04331 at 695.794 kb on + strand, within MPMX19_04331 at 695.795 kb on - strand, within MPMX19_04331 at 695.795 kb on - strand, within MPMX19_04331 at 695.795 kb on - strand, within MPMX19_04331 at 695.836 kb on + strand, within MPMX19_04331 at 695.836 kb on + strand, within MPMX19_04331 at 695.836 kb on + strand, within MPMX19_04331 at 695.836 kb on + strand, within MPMX19_04331 at 695.836 kb on + strand, within MPMX19_04331 at 695.836 kb on + strand, within MPMX19_04331 at 695.836 kb on + strand, within MPMX19_04331 at 695.837 kb on - strand, within MPMX19_04331 at 695.837 kb on - strand, within MPMX19_04331 at 695.878 kb on + strand, within MPMX19_04331 at 695.878 kb on + strand, within MPMX19_04331 at 695.878 kb on + strand, within MPMX19_04331 at 695.878 kb on + strand, within MPMX19_04331 at 695.878 kb on + strand, within MPMX19_04331 at 695.879 kb on - strand, within MPMX19_04331 at 695.879 kb on - strand, within MPMX19_04331 at 695.879 kb on - strand, within MPMX19_04331 at 695.879 kb on - strand, within MPMX19_04331 at 695.905 kb on + strand, within MPMX19_04331 at 695.905 kb on + strand, within MPMX19_04331 at 695.905 kb on + strand, within MPMX19_04331 at 695.905 kb on + strand, within MPMX19_04331 at 695.905 kb on + strand, within MPMX19_04331 at 695.905 kb on + strand, within MPMX19_04331 at 695.905 kb on + strand, within MPMX19_04331 at 695.905 kb on + strand, within MPMX19_04331 at 695.906 kb on - strand, within MPMX19_04331 at 695.906 kb on - strand, within MPMX19_04331 at 695.906 kb on - strand, within MPMX19_04331 at 695.906 kb on - strand, within MPMX19_04331 at 695.906 kb on - strand, within MPMX19_04331 at 695.962 kb on + strand, within MPMX19_04331 at 695.962 kb on + strand, within MPMX19_04331 at 695.962 kb on + strand, within MPMX19_04331 at 695.962 kb on + strand, within MPMX19_04331 at 695.962 kb on + strand, within MPMX19_04331 at 695.962 kb on + strand, within MPMX19_04331 at 695.962 kb on + strand, within MPMX19_04331 at 695.962 kb on + strand, within MPMX19_04331 at 695.962 kb on + strand, within MPMX19_04331 at 695.962 kb on + strand, within MPMX19_04331 at 695.962 kb on + strand, within MPMX19_04331 at 695.962 kb on + strand, within MPMX19_04331 at 695.963 kb on - strand, within MPMX19_04331 at 695.963 kb on - strand, within MPMX19_04331 at 695.963 kb on - strand, within MPMX19_04331 at 695.963 kb on - strand, within MPMX19_04331 at 695.963 kb on - strand, within MPMX19_04331 at 695.963 kb on - strand, within MPMX19_04331 at 695.963 kb on - strand, within MPMX19_04331 at 696.085 kb on + strand, within MPMX19_04331 at 696.085 kb on + strand, within MPMX19_04331 at 696.086 kb on - strand, within MPMX19_04331 at 696.115 kb on + strand, within MPMX19_04331 at 696.115 kb on + strand, within MPMX19_04331 at 696.115 kb on + strand, within MPMX19_04331 at 696.115 kb on + strand, within MPMX19_04331 at 696.115 kb on + strand, within MPMX19_04331 at 696.116 kb on - strand, within MPMX19_04331 at 696.116 kb on - strand, within MPMX19_04331 at 696.116 kb on - strand, within MPMX19_04331 at 696.117 kb on + strand, within MPMX19_04331 at 696.117 kb on + strand, within MPMX19_04331 at 696.117 kb on + strand, within MPMX19_04331 at 696.117 kb on + strand, within MPMX19_04331 at 696.117 kb on + strand, within MPMX19_04331 at 696.117 kb on + strand, within MPMX19_04331 at 696.117 kb on + strand, within MPMX19_04331 at 696.117 kb on + strand, within MPMX19_04331 at 696.117 kb on + strand, within MPMX19_04331 at 696.117 kb on + strand, within MPMX19_04331 at 696.117 kb on + strand, within MPMX19_04331 at 696.117 kb on + strand, within MPMX19_04331 at 696.118 kb on - strand, within MPMX19_04331 at 696.118 kb on - strand, within MPMX19_04331 at 696.118 kb on - strand, within MPMX19_04331 at 696.118 kb on - strand, within MPMX19_04331 at 696.118 kb on - strand, within MPMX19_04331 at 696.118 kb on - strand, within MPMX19_04331 at 696.130 kb on + strand, within MPMX19_04331 at 696.334 kb on - strand at 696.362 kb on + strand at 696.362 kb on + strand at 696.362 kb on + strand at 696.362 kb on + strand at 696.363 kb on - strand at 696.363 kb on - strand at 696.363 kb on - strand at 696.363 kb on - strand at 696.418 kb on + strand at 696.419 kb on - strand at 696.419 kb on - strand at 696.419 kb on - strand at 696.419 kb on - strand at 696.722 kb on + strand, within MPMX19_04332 at 696.722 kb on + strand, within MPMX19_04332 at 696.722 kb on + strand, within MPMX19_04332 at 696.722 kb on + strand, within MPMX19_04332 at 696.722 kb on + strand, within MPMX19_04332 at 696.722 kb on + strand, within MPMX19_04332 at 696.722 kb on + strand, within MPMX19_04332 at 696.722 kb on + strand, within MPMX19_04332 at 696.722 kb on + strand, within MPMX19_04332 at 696.722 kb on + strand, within MPMX19_04332 at 696.722 kb on + strand, within MPMX19_04332 at 696.722 kb on + strand, within MPMX19_04332 at 696.723 kb on - strand, within MPMX19_04332 at 696.723 kb on - strand, within MPMX19_04332 at 696.723 kb on - strand, within MPMX19_04332 at 696.723 kb on - strand, within MPMX19_04332 at 696.723 kb on - strand, within MPMX19_04332 at 696.723 kb on - strand, within MPMX19_04332 at 696.723 kb on - strand, within MPMX19_04332 at 696.723 kb on - strand, within MPMX19_04332 at 696.723 kb on - strand, within MPMX19_04332 at 696.723 kb on - strand, within MPMX19_04332 at 696.723 kb on - strand, within MPMX19_04332 at 696.833 kb on + strand, within MPMX19_04332 at 697.183 kb on + strand at 697.184 kb on - strand at 697.184 kb on - strand at 697.184 kb on - strand at 697.184 kb on - strand at 697.184 kb on - strand at 697.258 kb on + strand at 697.258 kb on + strand at 697.259 kb on - strand at 697.259 kb on - strand at 697.259 kb on - strand at 697.259 kb on - strand at 697.297 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 694,740 - MPMX19_04329 0.83 -1.8 694,743 - MPMX19_04329 0.84 +1.8 694,743 - MPMX19_04329 0.84 +0.3 694,743 - MPMX19_04329 0.84 +0.0 694,758 - MPMX19_04329 0.85 -0.4 694,758 - MPMX19_04329 0.85 +1.0 694,758 - MPMX19_04329 0.85 -1.0 694,951 - -0.2 694,990 - -2.0 694,990 - +0.3 694,990 - -0.8 694,990 - +0.2 694,990 - +0.8 694,990 - -0.8 694,990 - -0.8 694,990 - -0.8 694,990 - -2.9 694,990 - +0.4 695,060 + -0.4 695,060 + -1.4 695,060 + -0.4 695,060 + -0.4 695,060 + -0.0 695,060 + -0.2 695,060 + -1.2 695,060 + -0.1 695,060 + +0.1 695,061 - -0.7 695,061 - +0.2 695,061 - +1.0 695,061 - -0.7 695,061 - +1.0 695,061 - -1.5 695,061 - +0.8 695,087 + +0.4 695,087 + +0.2 695,087 + -0.8 695,087 + -1.1 695,087 + +0.1 695,087 + -0.6 695,087 + -1.1 695,087 + +0.2 695,087 + -0.2 695,088 - -0.8 695,088 - +0.2 695,677 + MPMX19_04331 0.20 -0.6 695,707 + MPMX19_04331 0.24 -1.5 695,707 + MPMX19_04331 0.24 -1.4 695,707 + MPMX19_04331 0.24 -0.4 695,707 + MPMX19_04331 0.24 +0.8 695,707 + MPMX19_04331 0.24 -1.6 695,707 + MPMX19_04331 0.24 -0.2 695,707 + MPMX19_04331 0.24 +0.2 695,707 + MPMX19_04331 0.24 +2.1 695,707 + MPMX19_04331 0.24 -0.5 695,707 + MPMX19_04331 0.24 -2.3 695,707 + MPMX19_04331 0.24 -2.0 695,707 + MPMX19_04331 0.24 -1.5 695,708 - MPMX19_04331 0.24 +0.4 695,708 - MPMX19_04331 0.24 +0.5 695,708 - MPMX19_04331 0.24 +0.6 695,708 - MPMX19_04331 0.24 -0.8 695,708 - MPMX19_04331 0.24 -0.6 695,708 - MPMX19_04331 0.24 -0.8 695,708 - MPMX19_04331 0.24 -0.1 695,708 - MPMX19_04331 0.24 -1.2 695,708 - MPMX19_04331 0.24 -1.0 695,794 + MPMX19_04331 0.35 +1.2 695,794 + MPMX19_04331 0.35 +0.0 695,794 + MPMX19_04331 0.35 -0.1 695,794 + MPMX19_04331 0.35 -0.5 695,794 + MPMX19_04331 0.35 -0.9 695,795 - MPMX19_04331 0.35 +0.2 695,795 - MPMX19_04331 0.35 -1.1 695,795 - MPMX19_04331 0.35 -0.3 695,836 + MPMX19_04331 0.40 -0.4 695,836 + MPMX19_04331 0.40 -0.5 695,836 + MPMX19_04331 0.40 -1.5 695,836 + MPMX19_04331 0.40 -0.5 695,836 + MPMX19_04331 0.40 -0.8 695,836 + MPMX19_04331 0.40 -2.4 695,836 + MPMX19_04331 0.40 +0.3 695,837 - MPMX19_04331 0.40 +0.3 695,837 - MPMX19_04331 0.40 -0.0 695,878 + MPMX19_04331 0.46 +0.0 695,878 + MPMX19_04331 0.46 -0.5 695,878 + MPMX19_04331 0.46 -0.5 695,878 + MPMX19_04331 0.46 +0.2 695,878 + MPMX19_04331 0.46 -0.9 695,879 - MPMX19_04331 0.46 +0.5 695,879 - MPMX19_04331 0.46 -0.6 695,879 - MPMX19_04331 0.46 -0.2 695,879 - MPMX19_04331 0.46 -0.7 695,905 + MPMX19_04331 0.49 +0.2 695,905 + MPMX19_04331 0.49 -0.7 695,905 + MPMX19_04331 0.49 +1.4 695,905 + MPMX19_04331 0.49 -0.8 695,905 + MPMX19_04331 0.49 -1.4 695,905 + MPMX19_04331 0.49 +0.3 695,905 + MPMX19_04331 0.49 -0.1 695,905 + MPMX19_04331 0.49 -0.5 695,906 - MPMX19_04331 0.49 +0.5 695,906 - MPMX19_04331 0.49 +1.1 695,906 - MPMX19_04331 0.49 -2.0 695,906 - MPMX19_04331 0.49 -0.4 695,906 - MPMX19_04331 0.49 +0.8 695,962 + MPMX19_04331 0.57 -0.5 695,962 + MPMX19_04331 0.57 -1.5 695,962 + MPMX19_04331 0.57 -1.4 695,962 + MPMX19_04331 0.57 -1.2 695,962 + MPMX19_04331 0.57 +0.0 695,962 + MPMX19_04331 0.57 -0.9 695,962 + MPMX19_04331 0.57 -0.7 695,962 + MPMX19_04331 0.57 +1.0 695,962 + MPMX19_04331 0.57 -1.2 695,962 + MPMX19_04331 0.57 -0.2 695,962 + MPMX19_04331 0.57 -0.9 695,962 + MPMX19_04331 0.57 -0.7 695,963 - MPMX19_04331 0.57 -1.0 695,963 - MPMX19_04331 0.57 -0.2 695,963 - MPMX19_04331 0.57 -0.2 695,963 - MPMX19_04331 0.57 -0.2 695,963 - MPMX19_04331 0.57 -1.8 695,963 - MPMX19_04331 0.57 +0.0 695,963 - MPMX19_04331 0.57 -1.4 696,085 + MPMX19_04331 0.72 +0.0 696,085 + MPMX19_04331 0.72 -1.0 696,086 - MPMX19_04331 0.73 +0.8 696,115 + MPMX19_04331 0.76 +0.1 696,115 + MPMX19_04331 0.76 -0.9 696,115 + MPMX19_04331 0.76 -1.5 696,115 + MPMX19_04331 0.76 -1.4 696,115 + MPMX19_04331 0.76 +0.2 696,116 - MPMX19_04331 0.76 +0.3 696,116 - MPMX19_04331 0.76 +1.8 696,116 - MPMX19_04331 0.76 +0.5 696,117 + MPMX19_04331 0.77 +0.6 696,117 + MPMX19_04331 0.77 +1.4 696,117 + MPMX19_04331 0.77 +1.0 696,117 + MPMX19_04331 0.77 -0.0 696,117 + MPMX19_04331 0.77 -0.4 696,117 + MPMX19_04331 0.77 -1.5 696,117 + MPMX19_04331 0.77 -0.8 696,117 + MPMX19_04331 0.77 +0.5 696,117 + MPMX19_04331 0.77 -1.7 696,117 + MPMX19_04331 0.77 -0.2 696,117 + MPMX19_04331 0.77 +0.1 696,117 + MPMX19_04331 0.77 -0.8 696,118 - MPMX19_04331 0.77 -0.7 696,118 - MPMX19_04331 0.77 -1.5 696,118 - MPMX19_04331 0.77 +0.5 696,118 - MPMX19_04331 0.77 +0.6 696,118 - MPMX19_04331 0.77 -0.5 696,118 - MPMX19_04331 0.77 -1.1 696,130 + MPMX19_04331 0.78 -1.0 696,334 - +0.1 696,362 + -0.0 696,362 + +0.3 696,362 + +0.5 696,362 + -1.8 696,363 - +0.8 696,363 - -0.0 696,363 - -1.2 696,363 - +0.0 696,418 + +0.8 696,419 - +0.5 696,419 - +0.5 696,419 - -0.3 696,419 - -0.1 696,722 + MPMX19_04332 0.51 -1.8 696,722 + MPMX19_04332 0.51 -0.2 696,722 + MPMX19_04332 0.51 +1.4 696,722 + MPMX19_04332 0.51 -0.4 696,722 + MPMX19_04332 0.51 +0.7 696,722 + MPMX19_04332 0.51 -1.2 696,722 + MPMX19_04332 0.51 +0.1 696,722 + MPMX19_04332 0.51 +0.5 696,722 + MPMX19_04332 0.51 -1.5 696,722 + MPMX19_04332 0.51 -1.5 696,722 + MPMX19_04332 0.51 -0.9 696,722 + MPMX19_04332 0.51 +0.4 696,723 - MPMX19_04332 0.51 -0.0 696,723 - MPMX19_04332 0.51 +0.2 696,723 - MPMX19_04332 0.51 -0.4 696,723 - MPMX19_04332 0.51 -0.3 696,723 - MPMX19_04332 0.51 +1.2 696,723 - MPMX19_04332 0.51 -0.7 696,723 - MPMX19_04332 0.51 +1.6 696,723 - MPMX19_04332 0.51 -0.8 696,723 - MPMX19_04332 0.51 +1.2 696,723 - MPMX19_04332 0.51 +0.1 696,723 - MPMX19_04332 0.51 +1.0 696,833 + MPMX19_04332 0.71 +1.4 697,183 + +0.8 697,184 - +0.8 697,184 - +0.0 697,184 - -1.5 697,184 - +1.4 697,184 - +1.1 697,258 + -0.8 697,258 + -0.2 697,259 - -0.1 697,259 - -0.5 697,259 - +0.2 697,259 - -1.3 697,297 - +1.1
Or see this region's nucleotide sequence