Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_04264 and MPMX19_04265 are separated by 34 nucleotides MPMX19_04265 and MPMX19_04266 are separated by 145 nucleotides MPMX19_04266 and MPMX19_04267 are separated by 195 nucleotides MPMX19_04267 and MPMX19_04268 are separated by 54 nucleotides
MPMX19_04264: MPMX19_04264 - hypothetical protein, at 624,367 to 625,119
_04264
MPMX19_04265: MPMX19_04265 - Aliphatic sulfonates import ATP-binding protein SsuB, at 625,154 to 625,831
_04265
MPMX19_04266: MPMX19_04266 - hypothetical protein, at 625,977 to 626,387
_04266
MPMX19_04267: MPMX19_04267 - hypothetical protein, at 626,583 to 627,113
_04267
MPMX19_04268: MPMX19_04268 - 2-keto-3-deoxygluconate permease, at 627,168 to 628,184
_04268
Position (kb) 625
626
627 Strain fitness (log2 ratio) -1
0
1 at 625.015 kb on + strand, within MPMX19_04264 at 625.015 kb on + strand, within MPMX19_04264 at 625.015 kb on + strand, within MPMX19_04264 at 625.015 kb on + strand, within MPMX19_04264 at 625.015 kb on + strand, within MPMX19_04264 at 625.015 kb on + strand, within MPMX19_04264 at 625.015 kb on + strand, within MPMX19_04264 at 625.015 kb on + strand, within MPMX19_04264 at 625.015 kb on + strand, within MPMX19_04264 at 625.015 kb on + strand, within MPMX19_04264 at 625.015 kb on + strand, within MPMX19_04264 at 625.015 kb on + strand, within MPMX19_04264 at 625.015 kb on + strand, within MPMX19_04264 at 625.015 kb on + strand, within MPMX19_04264 at 625.016 kb on - strand, within MPMX19_04264 at 625.016 kb on - strand, within MPMX19_04264 at 625.016 kb on - strand, within MPMX19_04264 at 625.016 kb on - strand, within MPMX19_04264 at 625.016 kb on - strand, within MPMX19_04264 at 625.016 kb on - strand, within MPMX19_04264 at 625.016 kb on - strand, within MPMX19_04264 at 625.016 kb on - strand, within MPMX19_04264 at 625.016 kb on - strand, within MPMX19_04264 at 625.016 kb on - strand, within MPMX19_04264 at 625.016 kb on - strand, within MPMX19_04264 at 625.016 kb on - strand, within MPMX19_04264 at 625.016 kb on - strand, within MPMX19_04264 at 625.016 kb on - strand, within MPMX19_04264 at 625.054 kb on + strand at 625.322 kb on + strand, within MPMX19_04265 at 625.323 kb on - strand, within MPMX19_04265 at 625.323 kb on - strand, within MPMX19_04265 at 625.323 kb on - strand, within MPMX19_04265 at 625.323 kb on - strand, within MPMX19_04265 at 626.727 kb on + strand, within MPMX19_04267 at 626.727 kb on + strand, within MPMX19_04267 at 626.727 kb on + strand, within MPMX19_04267 at 626.727 kb on + strand, within MPMX19_04267 at 626.727 kb on + strand, within MPMX19_04267 at 626.727 kb on + strand, within MPMX19_04267 at 626.727 kb on + strand, within MPMX19_04267 at 626.728 kb on - strand, within MPMX19_04267 at 626.728 kb on - strand, within MPMX19_04267 at 626.728 kb on - strand, within MPMX19_04267 at 627.111 kb on + strand at 627.112 kb on - strand at 627.112 kb on - strand at 627.154 kb on + strand at 627.154 kb on + strand at 627.154 kb on + strand at 627.154 kb on + strand at 627.154 kb on + strand at 627.155 kb on - strand at 627.155 kb on - strand at 627.169 kb on + strand at 627.170 kb on - strand at 627.170 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 625,015 + MPMX19_04264 0.86 +0.5 625,015 + MPMX19_04264 0.86 +0.4 625,015 + MPMX19_04264 0.86 -0.0 625,015 + MPMX19_04264 0.86 -0.8 625,015 + MPMX19_04264 0.86 +0.3 625,015 + MPMX19_04264 0.86 +0.2 625,015 + MPMX19_04264 0.86 +0.8 625,015 + MPMX19_04264 0.86 -0.0 625,015 + MPMX19_04264 0.86 -0.1 625,015 + MPMX19_04264 0.86 -1.4 625,015 + MPMX19_04264 0.86 -1.3 625,015 + MPMX19_04264 0.86 +1.0 625,015 + MPMX19_04264 0.86 +0.6 625,015 + MPMX19_04264 0.86 -0.0 625,016 - MPMX19_04264 0.86 +0.2 625,016 - MPMX19_04264 0.86 -1.5 625,016 - MPMX19_04264 0.86 -0.8 625,016 - MPMX19_04264 0.86 -1.0 625,016 - MPMX19_04264 0.86 -0.0 625,016 - MPMX19_04264 0.86 +0.7 625,016 - MPMX19_04264 0.86 -0.0 625,016 - MPMX19_04264 0.86 -1.1 625,016 - MPMX19_04264 0.86 +0.4 625,016 - MPMX19_04264 0.86 +0.1 625,016 - MPMX19_04264 0.86 +0.9 625,016 - MPMX19_04264 0.86 -1.3 625,016 - MPMX19_04264 0.86 +0.6 625,016 - MPMX19_04264 0.86 +1.3 625,054 + -0.2 625,322 + MPMX19_04265 0.25 -0.9 625,323 - MPMX19_04265 0.25 +0.1 625,323 - MPMX19_04265 0.25 -0.6 625,323 - MPMX19_04265 0.25 -0.3 625,323 - MPMX19_04265 0.25 +0.4 626,727 + MPMX19_04267 0.27 +0.5 626,727 + MPMX19_04267 0.27 +0.1 626,727 + MPMX19_04267 0.27 +0.1 626,727 + MPMX19_04267 0.27 -1.7 626,727 + MPMX19_04267 0.27 -0.6 626,727 + MPMX19_04267 0.27 -0.9 626,727 + MPMX19_04267 0.27 -0.6 626,728 - MPMX19_04267 0.27 +0.8 626,728 - MPMX19_04267 0.27 -0.5 626,728 - MPMX19_04267 0.27 +0.8 627,111 + -0.9 627,112 - +0.6 627,112 - -0.6 627,154 + +0.8 627,154 + +0.8 627,154 + -1.7 627,154 + -0.8 627,154 + -0.3 627,155 - +1.1 627,155 - -0.2 627,169 + -1.6 627,170 - -1.7 627,170 - +1.3
Or see this region's nucleotide sequence