Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_04068

Experiment: NF

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX19_04067 and MPMX19_04068 are separated by 13 nucleotidesMPMX19_04068 and MPMX19_04069 are separated by 5 nucleotidesMPMX19_04069 and MPMX19_04070 overlap by 4 nucleotides MPMX19_04067: MPMX19_04067 - Spermidine/putrescine import ATP-binding protein PotA, at 372,480 to 373,544 _04067 MPMX19_04068: MPMX19_04068 - hypothetical protein, at 373,558 to 374,361 _04068 MPMX19_04069: MPMX19_04069 - Putative 2-aminoethylphosphonate transport system permease protein PhnU, at 374,367 to 375,254 _04069 MPMX19_04070: MPMX19_04070 - hypothetical protein, at 375,251 to 376,267 _04070 Position (kb) 373 374 375Strain fitness (log2 ratio) -2 -1 0 1 2at 372.832 kb on + strand, within MPMX19_04067at 372.832 kb on + strand, within MPMX19_04067at 372.833 kb on - strand, within MPMX19_04067at 372.835 kb on + strand, within MPMX19_04067at 372.835 kb on + strand, within MPMX19_04067at 372.835 kb on + strand, within MPMX19_04067at 372.835 kb on + strand, within MPMX19_04067at 372.835 kb on + strand, within MPMX19_04067at 372.835 kb on + strand, within MPMX19_04067at 372.835 kb on + strand, within MPMX19_04067at 372.835 kb on + strand, within MPMX19_04067at 372.835 kb on + strand, within MPMX19_04067at 372.835 kb on + strand, within MPMX19_04067at 372.835 kb on + strand, within MPMX19_04067at 372.835 kb on + strand, within MPMX19_04067at 372.835 kb on + strand, within MPMX19_04067at 372.835 kb on + strand, within MPMX19_04067at 372.836 kb on - strand, within MPMX19_04067at 372.836 kb on - strand, within MPMX19_04067at 372.836 kb on - strand, within MPMX19_04067at 372.836 kb on - strand, within MPMX19_04067at 372.836 kb on - strand, within MPMX19_04067at 372.836 kb on - strand, within MPMX19_04067at 372.934 kb on + strand, within MPMX19_04067at 372.934 kb on + strand, within MPMX19_04067at 372.934 kb on + strand, within MPMX19_04067at 372.934 kb on + strand, within MPMX19_04067at 372.934 kb on + strand, within MPMX19_04067at 372.934 kb on + strand, within MPMX19_04067at 372.934 kb on + strand, within MPMX19_04067at 372.934 kb on + strand, within MPMX19_04067at 372.934 kb on + strand, within MPMX19_04067at 372.934 kb on + strand, within MPMX19_04067at 372.934 kb on + strand, within MPMX19_04067at 372.934 kb on + strand, within MPMX19_04067at 372.934 kb on + strand, within MPMX19_04067at 372.934 kb on + strand, within MPMX19_04067at 372.935 kb on - strand, within MPMX19_04067at 372.935 kb on - strand, within MPMX19_04067at 372.935 kb on - strand, within MPMX19_04067at 372.935 kb on - strand, within MPMX19_04067at 372.935 kb on - strand, within MPMX19_04067at 373.208 kb on - strand, within MPMX19_04067at 373.208 kb on - strand, within MPMX19_04067at 373.249 kb on + strand, within MPMX19_04067at 373.249 kb on + strand, within MPMX19_04067at 373.249 kb on + strand, within MPMX19_04067at 373.249 kb on + strand, within MPMX19_04067at 373.249 kb on + strand, within MPMX19_04067at 373.249 kb on + strand, within MPMX19_04067at 373.249 kb on + strand, within MPMX19_04067at 373.250 kb on - strand, within MPMX19_04067at 373.250 kb on - strand, within MPMX19_04067at 373.250 kb on - strand, within MPMX19_04067at 373.250 kb on - strand, within MPMX19_04067at 373.250 kb on - strand, within MPMX19_04067at 373.544 kb on + strandat 373.544 kb on + strandat 373.640 kb on + strand, within MPMX19_04068at 373.640 kb on + strand, within MPMX19_04068at 373.640 kb on + strand, within MPMX19_04068at 373.640 kb on + strand, within MPMX19_04068at 373.640 kb on + strand, within MPMX19_04068at 373.641 kb on - strand, within MPMX19_04068at 373.641 kb on - strand, within MPMX19_04068at 373.641 kb on - strand, within MPMX19_04068at 373.641 kb on - strand, within MPMX19_04068at 373.641 kb on - strand, within MPMX19_04068at 373.673 kb on + strand, within MPMX19_04068at 373.673 kb on + strand, within MPMX19_04068at 373.673 kb on + strand, within MPMX19_04068at 373.673 kb on + strand, within MPMX19_04068at 373.673 kb on + strand, within MPMX19_04068at 373.673 kb on + strand, within MPMX19_04068at 373.673 kb on + strand, within MPMX19_04068at 373.673 kb on + strand, within MPMX19_04068at 373.673 kb on + strand, within MPMX19_04068at 373.673 kb on + strand, within MPMX19_04068at 373.673 kb on + strand, within MPMX19_04068at 373.673 kb on + strand, within MPMX19_04068at 373.673 kb on + strand, within MPMX19_04068at 373.673 kb on + strand, within MPMX19_04068at 373.673 kb on + strand, within MPMX19_04068at 373.673 kb on + strand, within MPMX19_04068at 373.673 kb on + strand, within MPMX19_04068at 373.673 kb on + strand, within MPMX19_04068at 373.673 kb on + strand, within MPMX19_04068at 373.673 kb on + strand, within MPMX19_04068at 373.673 kb on + strand, within MPMX19_04068at 373.673 kb on + strand, within MPMX19_04068at 373.673 kb on + strand, within MPMX19_04068at 373.673 kb on + strand, within MPMX19_04068at 373.673 kb on + strand, within MPMX19_04068at 373.673 kb on + strand, within MPMX19_04068at 373.673 kb on + strand, within MPMX19_04068at 373.673 kb on + strand, within MPMX19_04068at 373.673 kb on + strand, within MPMX19_04068at 373.674 kb on - strand, within MPMX19_04068at 373.674 kb on - strand, within MPMX19_04068at 373.674 kb on - strand, within MPMX19_04068at 373.674 kb on - strand, within MPMX19_04068at 373.674 kb on - strand, within MPMX19_04068at 373.674 kb on - strand, within MPMX19_04068at 373.674 kb on - strand, within MPMX19_04068at 373.674 kb on - strand, within MPMX19_04068at 373.674 kb on - strand, within MPMX19_04068at 373.674 kb on - strand, within MPMX19_04068at 373.674 kb on - strand, within MPMX19_04068at 373.674 kb on - strand, within MPMX19_04068at 373.674 kb on - strand, within MPMX19_04068at 373.674 kb on - strand, within MPMX19_04068at 373.674 kb on - strand, within MPMX19_04068at 373.674 kb on - strand, within MPMX19_04068at 373.674 kb on - strand, within MPMX19_04068at 373.674 kb on - strand, within MPMX19_04068at 373.674 kb on - strand, within MPMX19_04068at 373.988 kb on + strand, within MPMX19_04068at 373.988 kb on + strand, within MPMX19_04068at 373.988 kb on + strand, within MPMX19_04068at 373.988 kb on + strand, within MPMX19_04068at 373.988 kb on + strand, within MPMX19_04068at 373.988 kb on + strand, within MPMX19_04068at 373.988 kb on + strand, within MPMX19_04068at 373.988 kb on + strand, within MPMX19_04068at 373.988 kb on + strand, within MPMX19_04068at 373.988 kb on + strand, within MPMX19_04068at 373.988 kb on + strand, within MPMX19_04068at 373.988 kb on + strand, within MPMX19_04068at 373.988 kb on + strand, within MPMX19_04068at 373.989 kb on - strand, within MPMX19_04068at 373.989 kb on - strand, within MPMX19_04068at 373.989 kb on - strand, within MPMX19_04068at 373.989 kb on - strand, within MPMX19_04068at 373.989 kb on - strand, within MPMX19_04068at 373.989 kb on - strand, within MPMX19_04068at 373.989 kb on - strand, within MPMX19_04068at 373.989 kb on - strand, within MPMX19_04068at 373.989 kb on - strand, within MPMX19_04068at 374.096 kb on + strand, within MPMX19_04068at 374.096 kb on + strand, within MPMX19_04068at 374.096 kb on + strand, within MPMX19_04068at 374.097 kb on - strand, within MPMX19_04068at 374.097 kb on - strand, within MPMX19_04068at 374.097 kb on - strand, within MPMX19_04068at 374.177 kb on + strand, within MPMX19_04068at 374.177 kb on + strand, within MPMX19_04068at 374.177 kb on + strand, within MPMX19_04068at 374.178 kb on - strand, within MPMX19_04068at 374.178 kb on - strand, within MPMX19_04068at 374.178 kb on - strand, within MPMX19_04068at 374.178 kb on - strand, within MPMX19_04068at 374.178 kb on - strand, within MPMX19_04068at 374.237 kb on + strand, within MPMX19_04068at 374.237 kb on + strand, within MPMX19_04068at 374.237 kb on + strand, within MPMX19_04068at 374.237 kb on + strand, within MPMX19_04068at 374.237 kb on + strand, within MPMX19_04068at 374.237 kb on + strand, within MPMX19_04068at 374.237 kb on + strand, within MPMX19_04068at 374.237 kb on + strand, within MPMX19_04068at 374.237 kb on + strand, within MPMX19_04068at 374.237 kb on + strand, within MPMX19_04068at 374.237 kb on + strand, within MPMX19_04068at 374.237 kb on + strand, within MPMX19_04068at 374.237 kb on + strand, within MPMX19_04068at 374.237 kb on + strand, within MPMX19_04068at 374.238 kb on - strand, within MPMX19_04068at 374.238 kb on - strand, within MPMX19_04068at 374.238 kb on - strand, within MPMX19_04068at 374.238 kb on - strand, within MPMX19_04068at 374.238 kb on - strand, within MPMX19_04068at 374.238 kb on - strand, within MPMX19_04068at 374.497 kb on + strand, within MPMX19_04069at 374.497 kb on + strand, within MPMX19_04069at 374.497 kb on + strand, within MPMX19_04069at 374.497 kb on + strand, within MPMX19_04069at 374.498 kb on - strand, within MPMX19_04069at 374.498 kb on - strand, within MPMX19_04069at 374.498 kb on - strand, within MPMX19_04069at 374.498 kb on - strand, within MPMX19_04069at 374.498 kb on - strand, within MPMX19_04069at 374.498 kb on - strand, within MPMX19_04069at 374.498 kb on - strand, within MPMX19_04069at 374.498 kb on - strand, within MPMX19_04069at 374.498 kb on - strand, within MPMX19_04069at 374.740 kb on + strand, within MPMX19_04069at 374.740 kb on + strand, within MPMX19_04069at 374.740 kb on + strand, within MPMX19_04069at 374.740 kb on + strand, within MPMX19_04069at 374.740 kb on + strand, within MPMX19_04069at 374.740 kb on + strand, within MPMX19_04069at 374.740 kb on + strand, within MPMX19_04069at 374.741 kb on - strand, within MPMX19_04069at 374.741 kb on - strand, within MPMX19_04069at 374.741 kb on - strand, within MPMX19_04069at 374.746 kb on + strand, within MPMX19_04069at 374.746 kb on + strand, within MPMX19_04069at 374.746 kb on + strand, within MPMX19_04069at 374.746 kb on + strand, within MPMX19_04069at 374.747 kb on - strand, within MPMX19_04069at 374.773 kb on + strand, within MPMX19_04069at 374.774 kb on - strand, within MPMX19_04069at 375.055 kb on + strand, within MPMX19_04069at 375.055 kb on + strand, within MPMX19_04069at 375.056 kb on - strand, within MPMX19_04069at 375.056 kb on - strand, within MPMX19_04069at 375.056 kb on - strand, within MPMX19_04069at 375.056 kb on - strand, within MPMX19_04069at 375.056 kb on - strand, within MPMX19_04069at 375.270 kb on + strandat 375.336 kb on + strandat 375.336 kb on + strandat 375.336 kb on + strandat 375.336 kb on + strandat 375.336 kb on + strandat 375.336 kb on + strandat 375.336 kb on + strandat 375.337 kb on - strandat 375.337 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction NF
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372,832 + MPMX19_04067 0.33 -0.5
372,832 + MPMX19_04067 0.33 -1.2
372,833 - MPMX19_04067 0.33 +0.3
372,835 + MPMX19_04067 0.33 +0.6
372,835 + MPMX19_04067 0.33 +0.8
372,835 + MPMX19_04067 0.33 -1.4
372,835 + MPMX19_04067 0.33 -0.5
372,835 + MPMX19_04067 0.33 -0.5
372,835 + MPMX19_04067 0.33 -2.3
372,835 + MPMX19_04067 0.33 -0.1
372,835 + MPMX19_04067 0.33 -1.6
372,835 + MPMX19_04067 0.33 -0.9
372,835 + MPMX19_04067 0.33 +0.3
372,835 + MPMX19_04067 0.33 -0.4
372,835 + MPMX19_04067 0.33 -0.3
372,835 + MPMX19_04067 0.33 +0.4
372,835 + MPMX19_04067 0.33 -2.0
372,836 - MPMX19_04067 0.33 -2.0
372,836 - MPMX19_04067 0.33 -0.2
372,836 - MPMX19_04067 0.33 -0.8
372,836 - MPMX19_04067 0.33 -0.1
372,836 - MPMX19_04067 0.33 -0.8
372,836 - MPMX19_04067 0.33 -0.2
372,934 + MPMX19_04067 0.43 +0.9
372,934 + MPMX19_04067 0.43 -1.6
372,934 + MPMX19_04067 0.43 -0.1
372,934 + MPMX19_04067 0.43 +0.8
372,934 + MPMX19_04067 0.43 -0.6
372,934 + MPMX19_04067 0.43 +0.8
372,934 + MPMX19_04067 0.43 -0.5
372,934 + MPMX19_04067 0.43 +0.3
372,934 + MPMX19_04067 0.43 -1.2
372,934 + MPMX19_04067 0.43 -1.3
372,934 + MPMX19_04067 0.43 +1.2
372,934 + MPMX19_04067 0.43 -0.8
372,934 + MPMX19_04067 0.43 -1.7
372,934 + MPMX19_04067 0.43 -0.4
372,935 - MPMX19_04067 0.43 +0.8
372,935 - MPMX19_04067 0.43 +0.1
372,935 - MPMX19_04067 0.43 -0.4
372,935 - MPMX19_04067 0.43 -1.3
372,935 - MPMX19_04067 0.43 +0.3
373,208 - MPMX19_04067 0.68 -1.2
373,208 - MPMX19_04067 0.68 +0.6
373,249 + MPMX19_04067 0.72 -0.8
373,249 + MPMX19_04067 0.72 -1.1
373,249 + MPMX19_04067 0.72 -0.8
373,249 + MPMX19_04067 0.72 -0.2
373,249 + MPMX19_04067 0.72 -2.1
373,249 + MPMX19_04067 0.72 -1.1
373,249 + MPMX19_04067 0.72 -1.6
373,250 - MPMX19_04067 0.72 -1.7
373,250 - MPMX19_04067 0.72 -0.2
373,250 - MPMX19_04067 0.72 -0.1
373,250 - MPMX19_04067 0.72 -0.7
373,250 - MPMX19_04067 0.72 -0.7
373,544 + -2.1
373,544 + +0.8
373,640 + MPMX19_04068 0.10 +1.2
373,640 + MPMX19_04068 0.10 -2.1
373,640 + MPMX19_04068 0.10 -0.1
373,640 + MPMX19_04068 0.10 -0.7
373,640 + MPMX19_04068 0.10 -0.2
373,641 - MPMX19_04068 0.10 -0.4
373,641 - MPMX19_04068 0.10 -1.2
373,641 - MPMX19_04068 0.10 +0.3
373,641 - MPMX19_04068 0.10 -0.1
373,641 - MPMX19_04068 0.10 -0.2
373,673 + MPMX19_04068 0.14 -2.2
373,673 + MPMX19_04068 0.14 -0.4
373,673 + MPMX19_04068 0.14 -0.5
373,673 + MPMX19_04068 0.14 +0.5
373,673 + MPMX19_04068 0.14 +1.2
373,673 + MPMX19_04068 0.14 -1.4
373,673 + MPMX19_04068 0.14 +1.4
373,673 + MPMX19_04068 0.14 -2.3
373,673 + MPMX19_04068 0.14 -2.2
373,673 + MPMX19_04068 0.14 -1.0
373,673 + MPMX19_04068 0.14 -0.2
373,673 + MPMX19_04068 0.14 -1.4
373,673 + MPMX19_04068 0.14 -0.4
373,673 + MPMX19_04068 0.14 +0.2
373,673 + MPMX19_04068 0.14 +0.0
373,673 + MPMX19_04068 0.14 -0.0
373,673 + MPMX19_04068 0.14 -1.3
373,673 + MPMX19_04068 0.14 -1.6
373,673 + MPMX19_04068 0.14 -0.2
373,673 + MPMX19_04068 0.14 +0.4
373,673 + MPMX19_04068 0.14 -1.1
373,673 + MPMX19_04068 0.14 -0.6
373,673 + MPMX19_04068 0.14 -0.6
373,673 + MPMX19_04068 0.14 -1.1
373,673 + MPMX19_04068 0.14 +1.0
373,673 + MPMX19_04068 0.14 -1.1
373,673 + MPMX19_04068 0.14 -0.4
373,673 + MPMX19_04068 0.14 -0.2
373,673 + MPMX19_04068 0.14 +1.0
373,674 - MPMX19_04068 0.14 -0.8
373,674 - MPMX19_04068 0.14 -1.0
373,674 - MPMX19_04068 0.14 -0.1
373,674 - MPMX19_04068 0.14 +1.1
373,674 - MPMX19_04068 0.14 +1.0
373,674 - MPMX19_04068 0.14 +0.8
373,674 - MPMX19_04068 0.14 +1.2
373,674 - MPMX19_04068 0.14 -0.9
373,674 - MPMX19_04068 0.14 -1.2
373,674 - MPMX19_04068 0.14 -0.8
373,674 - MPMX19_04068 0.14 +0.2
373,674 - MPMX19_04068 0.14 -0.8
373,674 - MPMX19_04068 0.14 -0.5
373,674 - MPMX19_04068 0.14 +0.8
373,674 - MPMX19_04068 0.14 -0.9
373,674 - MPMX19_04068 0.14 -2.6
373,674 - MPMX19_04068 0.14 +2.6
373,674 - MPMX19_04068 0.14 +0.3
373,674 - MPMX19_04068 0.14 +0.6
373,988 + MPMX19_04068 0.53 +0.4
373,988 + MPMX19_04068 0.53 -0.2
373,988 + MPMX19_04068 0.53 -1.4
373,988 + MPMX19_04068 0.53 +0.2
373,988 + MPMX19_04068 0.53 -0.4
373,988 + MPMX19_04068 0.53 -1.1
373,988 + MPMX19_04068 0.53 +0.6
373,988 + MPMX19_04068 0.53 -1.4
373,988 + MPMX19_04068 0.53 -0.1
373,988 + MPMX19_04068 0.53 -0.1
373,988 + MPMX19_04068 0.53 -0.2
373,988 + MPMX19_04068 0.53 -1.4
373,988 + MPMX19_04068 0.53 -1.6
373,989 - MPMX19_04068 0.54 -0.6
373,989 - MPMX19_04068 0.54 -2.1
373,989 - MPMX19_04068 0.54 -0.4
373,989 - MPMX19_04068 0.54 +0.4
373,989 - MPMX19_04068 0.54 -0.2
373,989 - MPMX19_04068 0.54 -1.2
373,989 - MPMX19_04068 0.54 -1.1
373,989 - MPMX19_04068 0.54 -0.1
373,989 - MPMX19_04068 0.54 -0.4
374,096 + MPMX19_04068 0.67 -1.4
374,096 + MPMX19_04068 0.67 -0.6
374,096 + MPMX19_04068 0.67 -1.1
374,097 - MPMX19_04068 0.67 -0.5
374,097 - MPMX19_04068 0.67 -1.5
374,097 - MPMX19_04068 0.67 -0.7
374,177 + MPMX19_04068 0.77 -0.3
374,177 + MPMX19_04068 0.77 -0.1
374,177 + MPMX19_04068 0.77 -0.8
374,178 - MPMX19_04068 0.77 +0.8
374,178 - MPMX19_04068 0.77 -0.2
374,178 - MPMX19_04068 0.77 -1.6
374,178 - MPMX19_04068 0.77 -0.8
374,178 - MPMX19_04068 0.77 -0.2
374,237 + MPMX19_04068 0.84 -0.6
374,237 + MPMX19_04068 0.84 -0.1
374,237 + MPMX19_04068 0.84 -1.5
374,237 + MPMX19_04068 0.84 -1.4
374,237 + MPMX19_04068 0.84 -0.7
374,237 + MPMX19_04068 0.84 -0.8
374,237 + MPMX19_04068 0.84 +0.0
374,237 + MPMX19_04068 0.84 +0.3
374,237 + MPMX19_04068 0.84 -0.2
374,237 + MPMX19_04068 0.84 -2.2
374,237 + MPMX19_04068 0.84 -0.8
374,237 + MPMX19_04068 0.84 -0.2
374,237 + MPMX19_04068 0.84 -0.6
374,237 + MPMX19_04068 0.84 +0.8
374,238 - MPMX19_04068 0.85 -1.4
374,238 - MPMX19_04068 0.85 -0.8
374,238 - MPMX19_04068 0.85 +1.0
374,238 - MPMX19_04068 0.85 +0.5
374,238 - MPMX19_04068 0.85 -2.5
374,238 - MPMX19_04068 0.85 +0.5
374,497 + MPMX19_04069 0.15 +0.0
374,497 + MPMX19_04069 0.15 +0.3
374,497 + MPMX19_04069 0.15 +0.6
374,497 + MPMX19_04069 0.15 -0.6
374,498 - MPMX19_04069 0.15 -1.0
374,498 - MPMX19_04069 0.15 -0.8
374,498 - MPMX19_04069 0.15 +0.3
374,498 - MPMX19_04069 0.15 -0.2
374,498 - MPMX19_04069 0.15 -0.4
374,498 - MPMX19_04069 0.15 +0.5
374,498 - MPMX19_04069 0.15 -0.4
374,498 - MPMX19_04069 0.15 +0.3
374,498 - MPMX19_04069 0.15 -0.2
374,740 + MPMX19_04069 0.42 +0.0
374,740 + MPMX19_04069 0.42 -0.8
374,740 + MPMX19_04069 0.42 +1.2
374,740 + MPMX19_04069 0.42 -0.5
374,740 + MPMX19_04069 0.42 +0.8
374,740 + MPMX19_04069 0.42 -0.2
374,740 + MPMX19_04069 0.42 +0.5
374,741 - MPMX19_04069 0.42 -2.2
374,741 - MPMX19_04069 0.42 +1.9
374,741 - MPMX19_04069 0.42 -0.5
374,746 + MPMX19_04069 0.43 +0.2
374,746 + MPMX19_04069 0.43 -1.2
374,746 + MPMX19_04069 0.43 -1.1
374,746 + MPMX19_04069 0.43 +0.2
374,747 - MPMX19_04069 0.43 -1.4
374,773 + MPMX19_04069 0.46 +0.8
374,774 - MPMX19_04069 0.46 +1.5
375,055 + MPMX19_04069 0.77 +0.8
375,055 + MPMX19_04069 0.77 +0.2
375,056 - MPMX19_04069 0.78 -1.1
375,056 - MPMX19_04069 0.78 -0.4
375,056 - MPMX19_04069 0.78 -0.2
375,056 - MPMX19_04069 0.78 +0.3
375,056 - MPMX19_04069 0.78 -0.6
375,270 + -0.9
375,336 + -0.6
375,336 + +1.3
375,336 + -0.8
375,336 + -1.5
375,336 + -0.2
375,336 + +2.2
375,336 + -0.9
375,337 - -2.2
375,337 - -0.1

Or see this region's nucleotide sequence