Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_04064 and MPMX19_04065 are separated by 8 nucleotides MPMX19_04065 and MPMX19_04066 are separated by 109 nucleotides MPMX19_04066 and MPMX19_04067 are separated by 40 nucleotides
MPMX19_04064: MPMX19_04064 - hypothetical protein, at 368,714 to 370,516
_04064
MPMX19_04065: MPMX19_04065 - Fe(3+)-binding periplasmic protein, at 370,525 to 371,511
_04065
MPMX19_04066: MPMX19_04066 - 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA, at 371,621 to 372,439
_04066
MPMX19_04067: MPMX19_04067 - Spermidine/putrescine import ATP-binding protein PotA, at 372,480 to 373,544
_04067
Position (kb) 370
371
372 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 369.705 kb on + strand, within MPMX19_04064 at 369.705 kb on + strand, within MPMX19_04064 at 369.705 kb on + strand, within MPMX19_04064 at 369.705 kb on + strand, within MPMX19_04064 at 369.706 kb on - strand, within MPMX19_04064 at 369.728 kb on + strand, within MPMX19_04064 at 369.729 kb on - strand, within MPMX19_04064 at 369.729 kb on - strand, within MPMX19_04064 at 369.729 kb on - strand, within MPMX19_04064 at 370.259 kb on + strand, within MPMX19_04064 at 370.260 kb on - strand, within MPMX19_04064 at 370.507 kb on + strand at 370.507 kb on + strand at 370.507 kb on + strand at 370.507 kb on + strand at 370.507 kb on + strand at 370.507 kb on + strand at 370.507 kb on + strand at 370.595 kb on + strand at 370.595 kb on + strand at 370.595 kb on + strand at 370.850 kb on + strand, within MPMX19_04065 at 370.850 kb on + strand, within MPMX19_04065 at 370.850 kb on + strand, within MPMX19_04065 at 370.850 kb on + strand, within MPMX19_04065 at 370.851 kb on - strand, within MPMX19_04065 at 370.851 kb on - strand, within MPMX19_04065 at 370.851 kb on - strand, within MPMX19_04065 at 370.851 kb on - strand, within MPMX19_04065 at 370.851 kb on - strand, within MPMX19_04065 at 370.868 kb on + strand, within MPMX19_04065 at 370.952 kb on + strand, within MPMX19_04065 at 370.952 kb on + strand, within MPMX19_04065 at 370.952 kb on + strand, within MPMX19_04065 at 370.952 kb on + strand, within MPMX19_04065 at 370.952 kb on + strand, within MPMX19_04065 at 370.952 kb on + strand, within MPMX19_04065 at 370.953 kb on - strand, within MPMX19_04065 at 370.953 kb on - strand, within MPMX19_04065 at 370.953 kb on - strand, within MPMX19_04065 at 370.953 kb on - strand, within MPMX19_04065 at 370.953 kb on - strand, within MPMX19_04065 at 370.953 kb on - strand, within MPMX19_04065 at 370.953 kb on - strand, within MPMX19_04065 at 370.953 kb on - strand, within MPMX19_04065 at 370.955 kb on + strand, within MPMX19_04065 at 370.955 kb on + strand, within MPMX19_04065 at 370.955 kb on + strand, within MPMX19_04065 at 370.955 kb on + strand, within MPMX19_04065 at 370.955 kb on + strand, within MPMX19_04065 at 370.956 kb on - strand, within MPMX19_04065 at 370.956 kb on - strand, within MPMX19_04065 at 370.956 kb on - strand, within MPMX19_04065 at 370.956 kb on - strand, within MPMX19_04065 at 370.956 kb on - strand, within MPMX19_04065 at 370.956 kb on - strand, within MPMX19_04065 at 370.956 kb on - strand, within MPMX19_04065 at 370.956 kb on - strand, within MPMX19_04065 at 371.018 kb on + strand, within MPMX19_04065 at 371.019 kb on - strand, within MPMX19_04065 at 371.019 kb on - strand, within MPMX19_04065 at 371.108 kb on + strand, within MPMX19_04065 at 371.108 kb on + strand, within MPMX19_04065 at 371.108 kb on + strand, within MPMX19_04065 at 371.108 kb on + strand, within MPMX19_04065 at 371.108 kb on + strand, within MPMX19_04065 at 371.108 kb on + strand, within MPMX19_04065 at 371.108 kb on + strand, within MPMX19_04065 at 371.108 kb on + strand, within MPMX19_04065 at 371.108 kb on + strand, within MPMX19_04065 at 371.108 kb on + strand, within MPMX19_04065 at 371.109 kb on - strand, within MPMX19_04065 at 371.109 kb on - strand, within MPMX19_04065 at 371.109 kb on - strand, within MPMX19_04065 at 371.109 kb on - strand, within MPMX19_04065 at 371.109 kb on - strand, within MPMX19_04065 at 371.109 kb on - strand, within MPMX19_04065 at 371.109 kb on - strand, within MPMX19_04065 at 371.109 kb on - strand, within MPMX19_04065 at 371.109 kb on - strand, within MPMX19_04065 at 371.109 kb on - strand, within MPMX19_04065 at 371.147 kb on + strand, within MPMX19_04065 at 371.147 kb on + strand, within MPMX19_04065 at 371.148 kb on - strand, within MPMX19_04065 at 371.201 kb on + strand, within MPMX19_04065 at 371.201 kb on + strand, within MPMX19_04065 at 371.202 kb on - strand, within MPMX19_04065 at 371.202 kb on - strand, within MPMX19_04065 at 371.202 kb on - strand, within MPMX19_04065 at 371.202 kb on - strand, within MPMX19_04065 at 371.202 kb on - strand, within MPMX19_04065 at 371.202 kb on - strand, within MPMX19_04065 at 371.417 kb on + strand at 371.417 kb on + strand at 371.417 kb on + strand at 371.417 kb on + strand at 371.417 kb on + strand at 371.417 kb on + strand at 371.417 kb on + strand at 371.417 kb on + strand at 371.418 kb on - strand at 371.418 kb on - strand at 371.418 kb on - strand at 371.418 kb on - strand at 371.418 kb on - strand at 371.418 kb on - strand at 371.418 kb on - strand at 371.418 kb on - strand at 371.546 kb on + strand at 371.546 kb on + strand at 371.546 kb on + strand at 371.602 kb on + strand at 371.602 kb on + strand at 371.602 kb on + strand at 371.602 kb on + strand at 371.602 kb on + strand at 371.603 kb on - strand at 371.603 kb on - strand at 371.603 kb on - strand at 371.603 kb on - strand at 371.615 kb on + strand at 371.615 kb on + strand at 371.616 kb on - strand at 371.622 kb on + strand at 371.622 kb on + strand at 371.622 kb on + strand at 371.623 kb on - strand at 371.623 kb on - strand at 371.623 kb on - strand at 371.667 kb on + strand at 371.667 kb on + strand at 371.667 kb on + strand at 371.667 kb on + strand at 371.668 kb on - strand at 371.668 kb on - strand at 371.668 kb on - strand at 371.944 kb on + strand, within MPMX19_04066 at 371.944 kb on + strand, within MPMX19_04066 at 371.944 kb on + strand, within MPMX19_04066 at 371.944 kb on + strand, within MPMX19_04066 at 371.944 kb on + strand, within MPMX19_04066 at 371.945 kb on - strand, within MPMX19_04066 at 371.945 kb on - strand, within MPMX19_04066 at 371.945 kb on - strand, within MPMX19_04066 at 371.945 kb on - strand, within MPMX19_04066 at 371.945 kb on - strand, within MPMX19_04066 at 371.945 kb on - strand, within MPMX19_04066 at 371.987 kb on + strand, within MPMX19_04066 at 371.987 kb on + strand, within MPMX19_04066 at 371.987 kb on + strand, within MPMX19_04066 at 371.987 kb on + strand, within MPMX19_04066 at 371.987 kb on + strand, within MPMX19_04066 at 371.987 kb on + strand, within MPMX19_04066 at 371.987 kb on + strand, within MPMX19_04066 at 371.987 kb on + strand, within MPMX19_04066 at 371.988 kb on - strand, within MPMX19_04066 at 371.988 kb on - strand, within MPMX19_04066 at 371.988 kb on - strand, within MPMX19_04066 at 372.123 kb on + strand, within MPMX19_04066 at 372.123 kb on + strand, within MPMX19_04066 at 372.123 kb on + strand, within MPMX19_04066 at 372.124 kb on - strand, within MPMX19_04066 at 372.124 kb on - strand, within MPMX19_04066 at 372.124 kb on - strand, within MPMX19_04066 at 372.124 kb on - strand, within MPMX19_04066 at 372.124 kb on - strand, within MPMX19_04066 at 372.124 kb on - strand, within MPMX19_04066 at 372.124 kb on - strand, within MPMX19_04066 at 372.261 kb on + strand, within MPMX19_04066 at 372.261 kb on + strand, within MPMX19_04066 at 372.261 kb on + strand, within MPMX19_04066 at 372.261 kb on + strand, within MPMX19_04066 at 372.261 kb on + strand, within MPMX19_04066 at 372.261 kb on + strand, within MPMX19_04066 at 372.261 kb on + strand, within MPMX19_04066 at 372.261 kb on + strand, within MPMX19_04066 at 372.261 kb on + strand, within MPMX19_04066 at 372.261 kb on + strand, within MPMX19_04066 at 372.261 kb on + strand, within MPMX19_04066 at 372.261 kb on + strand, within MPMX19_04066 at 372.261 kb on + strand, within MPMX19_04066 at 372.261 kb on + strand, within MPMX19_04066 at 372.261 kb on + strand, within MPMX19_04066 at 372.262 kb on - strand, within MPMX19_04066 at 372.262 kb on - strand, within MPMX19_04066 at 372.262 kb on - strand, within MPMX19_04066 at 372.262 kb on - strand, within MPMX19_04066 at 372.262 kb on - strand, within MPMX19_04066 at 372.262 kb on - strand, within MPMX19_04066 at 372.262 kb on - strand, within MPMX19_04066 at 372.262 kb on - strand, within MPMX19_04066 at 372.262 kb on - strand, within MPMX19_04066
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 369,705 + MPMX19_04064 0.55 +0.2 369,705 + MPMX19_04064 0.55 -0.8 369,705 + MPMX19_04064 0.55 -0.2 369,705 + MPMX19_04064 0.55 -1.6 369,706 - MPMX19_04064 0.55 -1.0 369,728 + MPMX19_04064 0.56 +1.8 369,729 - MPMX19_04064 0.56 -1.2 369,729 - MPMX19_04064 0.56 -0.8 369,729 - MPMX19_04064 0.56 -0.8 370,259 + MPMX19_04064 0.86 -0.2 370,260 - MPMX19_04064 0.86 -0.1 370,507 + -0.5 370,507 + +0.8 370,507 + -0.6 370,507 + -0.8 370,507 + -1.2 370,507 + +0.2 370,507 + +0.5 370,595 + +1.5 370,595 + -1.4 370,595 + -0.2 370,850 + MPMX19_04065 0.33 +0.8 370,850 + MPMX19_04065 0.33 -0.0 370,850 + MPMX19_04065 0.33 -1.8 370,850 + MPMX19_04065 0.33 -0.4 370,851 - MPMX19_04065 0.33 -2.2 370,851 - MPMX19_04065 0.33 +0.8 370,851 - MPMX19_04065 0.33 +0.6 370,851 - MPMX19_04065 0.33 -1.8 370,851 - MPMX19_04065 0.33 +0.9 370,868 + MPMX19_04065 0.35 +0.2 370,952 + MPMX19_04065 0.43 -0.8 370,952 + MPMX19_04065 0.43 -0.1 370,952 + MPMX19_04065 0.43 -0.8 370,952 + MPMX19_04065 0.43 +0.2 370,952 + MPMX19_04065 0.43 -0.0 370,952 + MPMX19_04065 0.43 -0.8 370,953 - MPMX19_04065 0.43 +0.8 370,953 - MPMX19_04065 0.43 -0.1 370,953 - MPMX19_04065 0.43 -1.2 370,953 - MPMX19_04065 0.43 -1.4 370,953 - MPMX19_04065 0.43 -1.4 370,953 - MPMX19_04065 0.43 +0.0 370,953 - MPMX19_04065 0.43 +0.2 370,953 - MPMX19_04065 0.43 +0.6 370,955 + MPMX19_04065 0.44 -1.8 370,955 + MPMX19_04065 0.44 -0.1 370,955 + MPMX19_04065 0.44 +0.9 370,955 + MPMX19_04065 0.44 -0.1 370,955 + MPMX19_04065 0.44 -1.4 370,956 - MPMX19_04065 0.44 -0.4 370,956 - MPMX19_04065 0.44 -0.1 370,956 - MPMX19_04065 0.44 +0.8 370,956 - MPMX19_04065 0.44 +0.0 370,956 - MPMX19_04065 0.44 +1.1 370,956 - MPMX19_04065 0.44 -0.8 370,956 - MPMX19_04065 0.44 -1.4 370,956 - MPMX19_04065 0.44 -0.8 371,018 + MPMX19_04065 0.50 -1.8 371,019 - MPMX19_04065 0.50 +0.3 371,019 - MPMX19_04065 0.50 +0.8 371,108 + MPMX19_04065 0.59 +0.1 371,108 + MPMX19_04065 0.59 +0.5 371,108 + MPMX19_04065 0.59 -1.6 371,108 + MPMX19_04065 0.59 -2.0 371,108 + MPMX19_04065 0.59 +0.0 371,108 + MPMX19_04065 0.59 -0.7 371,108 + MPMX19_04065 0.59 +0.2 371,108 + MPMX19_04065 0.59 +0.4 371,108 + MPMX19_04065 0.59 -1.2 371,108 + MPMX19_04065 0.59 +0.4 371,109 - MPMX19_04065 0.59 +0.2 371,109 - MPMX19_04065 0.59 +0.8 371,109 - MPMX19_04065 0.59 -0.4 371,109 - MPMX19_04065 0.59 -1.6 371,109 - MPMX19_04065 0.59 -2.1 371,109 - MPMX19_04065 0.59 +0.8 371,109 - MPMX19_04065 0.59 -0.7 371,109 - MPMX19_04065 0.59 +0.2 371,109 - MPMX19_04065 0.59 -0.8 371,109 - MPMX19_04065 0.59 +0.3 371,147 + MPMX19_04065 0.63 +0.6 371,147 + MPMX19_04065 0.63 -0.3 371,148 - MPMX19_04065 0.63 +0.0 371,201 + MPMX19_04065 0.68 -1.1 371,201 + MPMX19_04065 0.68 +0.3 371,202 - MPMX19_04065 0.69 -1.6 371,202 - MPMX19_04065 0.69 -0.8 371,202 - MPMX19_04065 0.69 -0.3 371,202 - MPMX19_04065 0.69 -0.8 371,202 - MPMX19_04065 0.69 -2.0 371,202 - MPMX19_04065 0.69 -0.2 371,417 + -0.2 371,417 + -0.7 371,417 + -1.6 371,417 + -1.4 371,417 + +1.2 371,417 + -1.0 371,417 + +0.2 371,417 + +0.4 371,418 - -0.5 371,418 - +0.1 371,418 - +0.8 371,418 - -0.2 371,418 - +1.1 371,418 - -1.8 371,418 - +1.0 371,418 - -0.5 371,546 + -0.8 371,546 + -0.3 371,546 + -0.8 371,602 + +0.4 371,602 + +0.2 371,602 + -0.7 371,602 + -0.6 371,602 + -0.4 371,603 - -0.7 371,603 - +1.2 371,603 - -0.2 371,603 - -1.4 371,615 + -1.4 371,615 + -1.8 371,616 - -0.4 371,622 + -0.9 371,622 + +0.1 371,622 + +0.6 371,623 - -0.2 371,623 - -1.1 371,623 - +0.9 371,667 + +0.5 371,667 + -0.7 371,667 + -0.8 371,667 + +0.0 371,668 - +0.8 371,668 - -0.6 371,668 - -0.2 371,944 + MPMX19_04066 0.39 -0.8 371,944 + MPMX19_04066 0.39 +0.2 371,944 + MPMX19_04066 0.39 -2.0 371,944 + MPMX19_04066 0.39 -0.6 371,944 + MPMX19_04066 0.39 -0.6 371,945 - MPMX19_04066 0.40 +0.2 371,945 - MPMX19_04066 0.40 -0.3 371,945 - MPMX19_04066 0.40 +0.5 371,945 - MPMX19_04066 0.40 -0.7 371,945 - MPMX19_04066 0.40 -1.2 371,945 - MPMX19_04066 0.40 +0.5 371,987 + MPMX19_04066 0.45 +0.9 371,987 + MPMX19_04066 0.45 +0.2 371,987 + MPMX19_04066 0.45 +0.6 371,987 + MPMX19_04066 0.45 +0.3 371,987 + MPMX19_04066 0.45 +1.5 371,987 + MPMX19_04066 0.45 -0.4 371,987 + MPMX19_04066 0.45 +0.2 371,987 + MPMX19_04066 0.45 +1.5 371,988 - MPMX19_04066 0.45 -1.2 371,988 - MPMX19_04066 0.45 +0.2 371,988 - MPMX19_04066 0.45 -1.1 372,123 + MPMX19_04066 0.61 +0.2 372,123 + MPMX19_04066 0.61 -0.3 372,123 + MPMX19_04066 0.61 -1.1 372,124 - MPMX19_04066 0.61 -0.6 372,124 - MPMX19_04066 0.61 -0.1 372,124 - MPMX19_04066 0.61 +1.1 372,124 - MPMX19_04066 0.61 -2.0 372,124 - MPMX19_04066 0.61 -1.6 372,124 - MPMX19_04066 0.61 -1.2 372,124 - MPMX19_04066 0.61 +1.2 372,261 + MPMX19_04066 0.78 +2.0 372,261 + MPMX19_04066 0.78 -0.6 372,261 + MPMX19_04066 0.78 +1.2 372,261 + MPMX19_04066 0.78 -2.9 372,261 + MPMX19_04066 0.78 +0.9 372,261 + MPMX19_04066 0.78 -0.4 372,261 + MPMX19_04066 0.78 +1.4 372,261 + MPMX19_04066 0.78 -0.1 372,261 + MPMX19_04066 0.78 +0.6 372,261 + MPMX19_04066 0.78 +0.3 372,261 + MPMX19_04066 0.78 -0.7 372,261 + MPMX19_04066 0.78 +0.8 372,261 + MPMX19_04066 0.78 -1.4 372,261 + MPMX19_04066 0.78 +0.0 372,261 + MPMX19_04066 0.78 +0.6 372,262 - MPMX19_04066 0.78 -0.3 372,262 - MPMX19_04066 0.78 +1.2 372,262 - MPMX19_04066 0.78 +0.3 372,262 - MPMX19_04066 0.78 -0.1 372,262 - MPMX19_04066 0.78 -0.8 372,262 - MPMX19_04066 0.78 +0.6 372,262 - MPMX19_04066 0.78 -0.6 372,262 - MPMX19_04066 0.78 -0.9 372,262 - MPMX19_04066 0.78 -0.4
Or see this region's nucleotide sequence