Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_03865 and MPMX19_03866 overlap by 4 nucleotides MPMX19_03866 and MPMX19_03867 overlap by 4 nucleotides
MPMX19_03865: MPMX19_03865 - Arabinose import ATP-binding protein AraG, at 112,066 to 113,607
_03865
MPMX19_03866: MPMX19_03866 - Ribose import permease protein RbsC, at 113,604 to 114,608
_03866
MPMX19_03867: MPMX19_03867 - Ribose import permease protein RbsC, at 114,605 to 115,612
_03867
Position (kb) 113
114
115 Strain fitness (log2 ratio) -2
-1
0
1
2 at 112.710 kb on + strand, within MPMX19_03865 at 112.710 kb on + strand, within MPMX19_03865 at 112.710 kb on + strand, within MPMX19_03865 at 112.710 kb on + strand, within MPMX19_03865 at 112.710 kb on + strand, within MPMX19_03865 at 112.711 kb on - strand, within MPMX19_03865 at 112.711 kb on - strand, within MPMX19_03865 at 113.107 kb on + strand, within MPMX19_03865 at 113.107 kb on + strand, within MPMX19_03865 at 113.107 kb on + strand, within MPMX19_03865 at 113.108 kb on - strand, within MPMX19_03865 at 113.108 kb on - strand, within MPMX19_03865 at 113.108 kb on - strand, within MPMX19_03865 at 113.108 kb on - strand, within MPMX19_03865 at 113.108 kb on - strand, within MPMX19_03865 at 113.108 kb on - strand, within MPMX19_03865 at 114.186 kb on + strand, within MPMX19_03866 at 114.187 kb on - strand, within MPMX19_03866 at 114.187 kb on - strand, within MPMX19_03866 at 114.258 kb on + strand, within MPMX19_03866 at 114.258 kb on + strand, within MPMX19_03866 at 114.259 kb on - strand, within MPMX19_03866 at 115.277 kb on + strand, within MPMX19_03867 at 115.278 kb on - strand, within MPMX19_03867
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 112,710 + MPMX19_03865 0.42 -0.5 112,710 + MPMX19_03865 0.42 -0.5 112,710 + MPMX19_03865 0.42 +0.7 112,710 + MPMX19_03865 0.42 -1.8 112,710 + MPMX19_03865 0.42 +1.6 112,711 - MPMX19_03865 0.42 -0.5 112,711 - MPMX19_03865 0.42 +0.9 113,107 + MPMX19_03865 0.68 -0.9 113,107 + MPMX19_03865 0.68 -1.9 113,107 + MPMX19_03865 0.68 +0.6 113,108 - MPMX19_03865 0.68 -0.4 113,108 - MPMX19_03865 0.68 +0.5 113,108 - MPMX19_03865 0.68 +0.5 113,108 - MPMX19_03865 0.68 -0.4 113,108 - MPMX19_03865 0.68 -0.5 113,108 - MPMX19_03865 0.68 -0.5 114,186 + MPMX19_03866 0.58 -0.8 114,187 - MPMX19_03866 0.58 -1.2 114,187 - MPMX19_03866 0.58 +2.3 114,258 + MPMX19_03866 0.65 +1.0 114,258 + MPMX19_03866 0.65 -0.8 114,259 - MPMX19_03866 0.65 +1.5 115,277 + MPMX19_03867 0.67 +1.5 115,278 - MPMX19_03867 0.67 -0.8
Or see this region's nucleotide sequence