Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_03814 and MPMX19_03815 are separated by 11 nucleotides MPMX19_03815 and MPMX19_03816 are separated by 89 nucleotides MPMX19_03816 and MPMX19_03817 are separated by 172 nucleotides
MPMX19_03814: MPMX19_03814 - hypothetical protein, at 51,338 to 52,486
_03814
MPMX19_03815: MPMX19_03815 - hypothetical protein, at 52,498 to 52,992
_03815
MPMX19_03816: MPMX19_03816 - hypothetical protein, at 53,082 to 53,720
_03816
MPMX19_03817: MPMX19_03817 - 6-deoxy-6-sulfogluconolactonase, at 53,893 to 54,786
_03817
Position (kb) 52
53 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 51.512 kb on + strand, within MPMX19_03814 at 51.512 kb on + strand, within MPMX19_03814 at 51.512 kb on + strand, within MPMX19_03814 at 51.512 kb on + strand, within MPMX19_03814 at 51.512 kb on + strand, within MPMX19_03814 at 51.512 kb on + strand, within MPMX19_03814 at 51.513 kb on - strand, within MPMX19_03814 at 51.513 kb on - strand, within MPMX19_03814 at 51.513 kb on - strand, within MPMX19_03814 at 51.513 kb on - strand, within MPMX19_03814 at 51.513 kb on - strand, within MPMX19_03814 at 51.636 kb on + strand, within MPMX19_03814 at 51.636 kb on + strand, within MPMX19_03814 at 51.636 kb on + strand, within MPMX19_03814 at 51.637 kb on - strand, within MPMX19_03814 at 51.637 kb on - strand, within MPMX19_03814 at 51.637 kb on - strand, within MPMX19_03814 at 51.637 kb on - strand, within MPMX19_03814 at 51.997 kb on + strand, within MPMX19_03814 at 51.997 kb on + strand, within MPMX19_03814 at 51.997 kb on + strand, within MPMX19_03814 at 51.997 kb on + strand, within MPMX19_03814 at 51.997 kb on + strand, within MPMX19_03814 at 51.998 kb on - strand, within MPMX19_03814 at 51.998 kb on - strand, within MPMX19_03814 at 52.076 kb on + strand, within MPMX19_03814 at 52.077 kb on - strand, within MPMX19_03814 at 52.077 kb on - strand, within MPMX19_03814 at 52.077 kb on - strand, within MPMX19_03814 at 52.079 kb on + strand, within MPMX19_03814 at 52.079 kb on + strand, within MPMX19_03814 at 52.080 kb on - strand, within MPMX19_03814 at 52.080 kb on - strand, within MPMX19_03814 at 52.117 kb on + strand, within MPMX19_03814 at 52.117 kb on + strand, within MPMX19_03814 at 52.117 kb on + strand, within MPMX19_03814 at 52.118 kb on - strand, within MPMX19_03814 at 52.118 kb on - strand, within MPMX19_03814 at 52.118 kb on - strand, within MPMX19_03814 at 52.118 kb on - strand, within MPMX19_03814 at 52.118 kb on - strand, within MPMX19_03814 at 52.118 kb on - strand, within MPMX19_03814 at 52.118 kb on - strand, within MPMX19_03814 at 52.118 kb on - strand, within MPMX19_03814 at 52.118 kb on - strand, within MPMX19_03814 at 52.184 kb on + strand, within MPMX19_03814 at 52.185 kb on - strand, within MPMX19_03814 at 52.185 kb on - strand, within MPMX19_03814 at 52.232 kb on + strand, within MPMX19_03814 at 52.233 kb on - strand, within MPMX19_03814 at 52.233 kb on - strand, within MPMX19_03814 at 52.233 kb on - strand, within MPMX19_03814 at 52.258 kb on + strand, within MPMX19_03814 at 52.259 kb on - strand, within MPMX19_03814 at 52.259 kb on - strand, within MPMX19_03814 at 52.361 kb on + strand, within MPMX19_03814 at 52.361 kb on + strand, within MPMX19_03814 at 52.361 kb on + strand, within MPMX19_03814 at 52.361 kb on + strand, within MPMX19_03814 at 52.361 kb on + strand, within MPMX19_03814 at 52.362 kb on - strand, within MPMX19_03814 at 52.362 kb on - strand, within MPMX19_03814 at 52.362 kb on - strand, within MPMX19_03814 at 52.363 kb on + strand, within MPMX19_03814 at 52.364 kb on - strand, within MPMX19_03814 at 52.386 kb on - strand at 52.386 kb on - strand at 52.386 kb on - strand at 52.558 kb on + strand, within MPMX19_03815 at 52.558 kb on + strand, within MPMX19_03815 at 52.558 kb on + strand, within MPMX19_03815 at 52.558 kb on + strand, within MPMX19_03815 at 52.558 kb on + strand, within MPMX19_03815 at 52.559 kb on - strand, within MPMX19_03815 at 52.559 kb on - strand, within MPMX19_03815 at 52.559 kb on - strand, within MPMX19_03815 at 52.559 kb on - strand, within MPMX19_03815 at 52.559 kb on - strand, within MPMX19_03815 at 52.559 kb on - strand, within MPMX19_03815 at 52.673 kb on - strand, within MPMX19_03815 at 52.673 kb on - strand, within MPMX19_03815 at 52.708 kb on - strand, within MPMX19_03815 at 52.708 kb on - strand, within MPMX19_03815 at 52.757 kb on - strand, within MPMX19_03815 at 52.920 kb on + strand, within MPMX19_03815 at 52.920 kb on + strand, within MPMX19_03815 at 52.920 kb on + strand, within MPMX19_03815 at 52.920 kb on + strand, within MPMX19_03815 at 52.920 kb on + strand, within MPMX19_03815 at 52.920 kb on + strand, within MPMX19_03815 at 52.921 kb on - strand, within MPMX19_03815 at 52.921 kb on - strand, within MPMX19_03815 at 52.997 kb on + strand at 53.009 kb on + strand at 53.009 kb on + strand at 53.009 kb on + strand at 53.009 kb on + strand at 53.009 kb on + strand at 53.009 kb on + strand at 53.010 kb on - strand at 53.010 kb on - strand at 53.010 kb on - strand at 53.058 kb on + strand at 53.058 kb on + strand at 53.058 kb on + strand at 53.058 kb on + strand at 53.058 kb on + strand at 53.058 kb on + strand at 53.058 kb on + strand at 53.632 kb on - strand, within MPMX19_03816 at 53.632 kb on - strand, within MPMX19_03816 at 53.646 kb on + strand, within MPMX19_03816 at 53.646 kb on + strand, within MPMX19_03816 at 53.646 kb on + strand, within MPMX19_03816 at 53.655 kb on + strand, within MPMX19_03816
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 51,512 + MPMX19_03814 0.15 -0.2 51,512 + MPMX19_03814 0.15 -0.4 51,512 + MPMX19_03814 0.15 -1.5 51,512 + MPMX19_03814 0.15 +1.8 51,512 + MPMX19_03814 0.15 -1.7 51,512 + MPMX19_03814 0.15 +0.2 51,513 - MPMX19_03814 0.15 +0.1 51,513 - MPMX19_03814 0.15 +1.8 51,513 - MPMX19_03814 0.15 -0.4 51,513 - MPMX19_03814 0.15 -0.7 51,513 - MPMX19_03814 0.15 -0.5 51,636 + MPMX19_03814 0.26 -2.0 51,636 + MPMX19_03814 0.26 +0.0 51,636 + MPMX19_03814 0.26 -0.2 51,637 - MPMX19_03814 0.26 -2.3 51,637 - MPMX19_03814 0.26 +0.6 51,637 - MPMX19_03814 0.26 +0.6 51,637 - MPMX19_03814 0.26 +0.8 51,997 + MPMX19_03814 0.57 -1.9 51,997 + MPMX19_03814 0.57 -0.8 51,997 + MPMX19_03814 0.57 +1.4 51,997 + MPMX19_03814 0.57 +0.3 51,997 + MPMX19_03814 0.57 -1.5 51,998 - MPMX19_03814 0.57 +1.5 51,998 - MPMX19_03814 0.57 -2.0 52,076 + MPMX19_03814 0.64 -1.0 52,077 - MPMX19_03814 0.64 -0.4 52,077 - MPMX19_03814 0.64 -0.5 52,077 - MPMX19_03814 0.64 -0.8 52,079 + MPMX19_03814 0.64 -2.0 52,079 + MPMX19_03814 0.64 -0.8 52,080 - MPMX19_03814 0.65 +0.0 52,080 - MPMX19_03814 0.65 -1.7 52,117 + MPMX19_03814 0.68 +0.5 52,117 + MPMX19_03814 0.68 -0.1 52,117 + MPMX19_03814 0.68 -0.6 52,118 - MPMX19_03814 0.68 -1.2 52,118 - MPMX19_03814 0.68 -0.8 52,118 - MPMX19_03814 0.68 -0.0 52,118 - MPMX19_03814 0.68 -1.7 52,118 - MPMX19_03814 0.68 +0.6 52,118 - MPMX19_03814 0.68 -1.9 52,118 - MPMX19_03814 0.68 -1.5 52,118 - MPMX19_03814 0.68 +1.6 52,118 - MPMX19_03814 0.68 +0.8 52,184 + MPMX19_03814 0.74 -1.2 52,185 - MPMX19_03814 0.74 -2.1 52,185 - MPMX19_03814 0.74 +2.8 52,232 + MPMX19_03814 0.78 -2.1 52,233 - MPMX19_03814 0.78 +1.6 52,233 - MPMX19_03814 0.78 -0.3 52,233 - MPMX19_03814 0.78 +0.0 52,258 + MPMX19_03814 0.80 -0.4 52,259 - MPMX19_03814 0.80 -0.6 52,259 - MPMX19_03814 0.80 -0.7 52,361 + MPMX19_03814 0.89 -0.5 52,361 + MPMX19_03814 0.89 -0.4 52,361 + MPMX19_03814 0.89 -0.4 52,361 + MPMX19_03814 0.89 -0.5 52,361 + MPMX19_03814 0.89 -0.5 52,362 - MPMX19_03814 0.89 +0.3 52,362 - MPMX19_03814 0.89 -0.7 52,362 - MPMX19_03814 0.89 +2.5 52,363 + MPMX19_03814 0.89 -0.4 52,364 - MPMX19_03814 0.89 -0.8 52,386 - -0.9 52,386 - -0.1 52,386 - +0.5 52,558 + MPMX19_03815 0.12 +0.4 52,558 + MPMX19_03815 0.12 -1.9 52,558 + MPMX19_03815 0.12 -0.0 52,558 + MPMX19_03815 0.12 -0.2 52,558 + MPMX19_03815 0.12 +0.4 52,559 - MPMX19_03815 0.12 -0.6 52,559 - MPMX19_03815 0.12 -0.3 52,559 - MPMX19_03815 0.12 -0.9 52,559 - MPMX19_03815 0.12 -0.9 52,559 - MPMX19_03815 0.12 -0.8 52,559 - MPMX19_03815 0.12 -0.9 52,673 - MPMX19_03815 0.35 +0.4 52,673 - MPMX19_03815 0.35 -0.8 52,708 - MPMX19_03815 0.42 -0.4 52,708 - MPMX19_03815 0.42 +0.5 52,757 - MPMX19_03815 0.52 +0.8 52,920 + MPMX19_03815 0.85 -0.0 52,920 + MPMX19_03815 0.85 -0.4 52,920 + MPMX19_03815 0.85 -1.9 52,920 + MPMX19_03815 0.85 -0.5 52,920 + MPMX19_03815 0.85 +0.6 52,920 + MPMX19_03815 0.85 -0.2 52,921 - MPMX19_03815 0.85 -1.1 52,921 - MPMX19_03815 0.85 -0.4 52,997 + +3.4 53,009 + -1.0 53,009 + -0.1 53,009 + +0.8 53,009 + +0.5 53,009 + -0.2 53,009 + +0.1 53,010 - +2.0 53,010 - +0.0 53,010 - -1.7 53,058 + -0.7 53,058 + -1.9 53,058 + -0.4 53,058 + -1.0 53,058 + -0.4 53,058 + -0.5 53,058 + +0.4 53,632 - MPMX19_03816 0.86 -0.5 53,632 - MPMX19_03816 0.86 -1.3 53,646 + MPMX19_03816 0.88 -0.2 53,646 + MPMX19_03816 0.88 -0.0 53,646 + MPMX19_03816 0.88 +0.3 53,655 + MPMX19_03816 0.90 +0.2
Or see this region's nucleotide sequence