Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_03775 and MPMX19_03776 overlap by 4 nucleotides MPMX19_03776 and MPMX19_03777 overlap by 4 nucleotides MPMX19_03777 and MPMX19_03778 overlap by 4 nucleotides MPMX19_03778 and MPMX19_03779 overlap by 1 nucleotides MPMX19_03779 and MPMX19_03780 overlap by 1 nucleotides
MPMX19_03775: MPMX19_03775 - hypothetical protein, at 19,560 to 20,135
_03775
MPMX19_03776: MPMX19_03776 - hypothetical protein, at 20,132 to 20,497
_03776
MPMX19_03777: MPMX19_03777 - hypothetical protein, at 20,494 to 20,754
_03777
MPMX19_03778: MPMX19_03778 - hypothetical protein, at 20,751 to 21,245
_03778
MPMX19_03779: MPMX19_03779 - hypothetical protein, at 21,245 to 21,490
_03779
MPMX19_03780: MPMX19_03780 - hypothetical protein, at 21,490 to 22,416
_03780
Position (kb) 20
21
22 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 19.951 kb on - strand, within MPMX19_03775 at 19.951 kb on - strand, within MPMX19_03775 at 19.951 kb on - strand, within MPMX19_03775 at 19.951 kb on - strand, within MPMX19_03775 at 19.951 kb on - strand, within MPMX19_03775 at 19.951 kb on - strand, within MPMX19_03775 at 19.951 kb on - strand, within MPMX19_03775 at 19.951 kb on - strand, within MPMX19_03775 at 19.978 kb on - strand, within MPMX19_03775 at 19.978 kb on - strand, within MPMX19_03775 at 20.020 kb on - strand, within MPMX19_03775 at 20.256 kb on - strand, within MPMX19_03776 at 20.256 kb on - strand, within MPMX19_03776 at 20.256 kb on - strand, within MPMX19_03776 at 20.256 kb on - strand, within MPMX19_03776 at 20.256 kb on - strand, within MPMX19_03776 at 20.256 kb on - strand, within MPMX19_03776 at 20.256 kb on - strand, within MPMX19_03776 at 20.256 kb on - strand, within MPMX19_03776 at 20.256 kb on - strand, within MPMX19_03776 at 20.256 kb on - strand, within MPMX19_03776 at 20.256 kb on - strand, within MPMX19_03776 at 20.256 kb on - strand, within MPMX19_03776 at 20.295 kb on - strand, within MPMX19_03776 at 20.295 kb on - strand, within MPMX19_03776 at 20.295 kb on - strand, within MPMX19_03776 at 20.295 kb on - strand, within MPMX19_03776 at 20.295 kb on - strand, within MPMX19_03776 at 20.764 kb on - strand at 20.764 kb on - strand at 20.764 kb on - strand at 20.764 kb on - strand at 20.764 kb on - strand at 20.806 kb on - strand, within MPMX19_03778 at 21.121 kb on - strand, within MPMX19_03778 at 21.828 kb on + strand, within MPMX19_03780 at 21.828 kb on + strand, within MPMX19_03780 at 21.828 kb on + strand, within MPMX19_03780 at 21.828 kb on + strand, within MPMX19_03780 at 21.829 kb on - strand, within MPMX19_03780 at 21.829 kb on - strand, within MPMX19_03780 at 21.829 kb on - strand, within MPMX19_03780 at 21.829 kb on - strand, within MPMX19_03780 at 21.835 kb on + strand, within MPMX19_03780 at 21.835 kb on + strand, within MPMX19_03780 at 21.835 kb on + strand, within MPMX19_03780 at 21.835 kb on + strand, within MPMX19_03780 at 21.836 kb on - strand, within MPMX19_03780 at 21.836 kb on - strand, within MPMX19_03780 at 21.836 kb on - strand, within MPMX19_03780 at 21.836 kb on - strand, within MPMX19_03780 at 21.836 kb on - strand, within MPMX19_03780 at 21.907 kb on + strand, within MPMX19_03780 at 21.907 kb on + strand, within MPMX19_03780 at 21.907 kb on + strand, within MPMX19_03780 at 21.907 kb on + strand, within MPMX19_03780 at 21.907 kb on + strand, within MPMX19_03780 at 21.907 kb on + strand, within MPMX19_03780 at 21.907 kb on + strand, within MPMX19_03780 at 21.907 kb on + strand, within MPMX19_03780 at 21.907 kb on + strand, within MPMX19_03780 at 21.907 kb on + strand, within MPMX19_03780 at 21.907 kb on + strand, within MPMX19_03780 at 21.907 kb on + strand, within MPMX19_03780 at 21.908 kb on - strand, within MPMX19_03780 at 21.908 kb on - strand, within MPMX19_03780 at 21.908 kb on - strand, within MPMX19_03780 at 21.908 kb on - strand, within MPMX19_03780 at 21.908 kb on - strand, within MPMX19_03780 at 21.908 kb on - strand, within MPMX19_03780 at 21.908 kb on - strand, within MPMX19_03780 at 21.908 kb on - strand, within MPMX19_03780 at 21.908 kb on - strand, within MPMX19_03780 at 21.908 kb on - strand, within MPMX19_03780 at 21.908 kb on - strand, within MPMX19_03780 at 22.066 kb on + strand, within MPMX19_03780 at 22.066 kb on + strand, within MPMX19_03780 at 22.066 kb on + strand, within MPMX19_03780 at 22.066 kb on + strand, within MPMX19_03780 at 22.066 kb on + strand, within MPMX19_03780 at 22.066 kb on + strand, within MPMX19_03780 at 22.066 kb on + strand, within MPMX19_03780 at 22.066 kb on + strand, within MPMX19_03780 at 22.066 kb on + strand, within MPMX19_03780 at 22.067 kb on - strand, within MPMX19_03780 at 22.067 kb on - strand, within MPMX19_03780 at 22.067 kb on - strand, within MPMX19_03780 at 22.067 kb on - strand, within MPMX19_03780 at 22.067 kb on - strand, within MPMX19_03780 at 22.067 kb on - strand, within MPMX19_03780 at 22.067 kb on - strand, within MPMX19_03780 at 22.067 kb on - strand, within MPMX19_03780 at 22.067 kb on - strand, within MPMX19_03780 at 22.067 kb on - strand, within MPMX19_03780 at 22.067 kb on - strand, within MPMX19_03780 at 22.067 kb on - strand, within MPMX19_03780
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 19,951 - MPMX19_03775 0.68 +0.2 19,951 - MPMX19_03775 0.68 -0.2 19,951 - MPMX19_03775 0.68 -1.1 19,951 - MPMX19_03775 0.68 -0.2 19,951 - MPMX19_03775 0.68 +1.0 19,951 - MPMX19_03775 0.68 -2.1 19,951 - MPMX19_03775 0.68 -0.5 19,951 - MPMX19_03775 0.68 +0.0 19,978 - MPMX19_03775 0.73 -1.4 19,978 - MPMX19_03775 0.73 +0.8 20,020 - MPMX19_03775 0.80 -1.0 20,256 - MPMX19_03776 0.34 -0.5 20,256 - MPMX19_03776 0.34 -0.4 20,256 - MPMX19_03776 0.34 -0.2 20,256 - MPMX19_03776 0.34 -0.4 20,256 - MPMX19_03776 0.34 -1.2 20,256 - MPMX19_03776 0.34 -2.6 20,256 - MPMX19_03776 0.34 -2.7 20,256 - MPMX19_03776 0.34 +0.0 20,256 - MPMX19_03776 0.34 +0.2 20,256 - MPMX19_03776 0.34 -0.2 20,256 - MPMX19_03776 0.34 +1.0 20,256 - MPMX19_03776 0.34 +1.4 20,295 - MPMX19_03776 0.45 +1.5 20,295 - MPMX19_03776 0.45 +0.8 20,295 - MPMX19_03776 0.45 -1.0 20,295 - MPMX19_03776 0.45 +0.0 20,295 - MPMX19_03776 0.45 -0.5 20,764 - -0.8 20,764 - -0.4 20,764 - -0.5 20,764 - +0.0 20,764 - +1.4 20,806 - MPMX19_03778 0.11 -0.8 21,121 - MPMX19_03778 0.75 +1.0 21,828 + MPMX19_03780 0.36 +1.2 21,828 + MPMX19_03780 0.36 -0.7 21,828 + MPMX19_03780 0.36 -1.0 21,828 + MPMX19_03780 0.36 -0.8 21,829 - MPMX19_03780 0.37 -2.1 21,829 - MPMX19_03780 0.37 -1.4 21,829 - MPMX19_03780 0.37 -0.7 21,829 - MPMX19_03780 0.37 -0.2 21,835 + MPMX19_03780 0.37 +0.2 21,835 + MPMX19_03780 0.37 -0.6 21,835 + MPMX19_03780 0.37 -1.7 21,835 + MPMX19_03780 0.37 -0.7 21,836 - MPMX19_03780 0.37 -0.5 21,836 - MPMX19_03780 0.37 -0.5 21,836 - MPMX19_03780 0.37 -2.9 21,836 - MPMX19_03780 0.37 -0.8 21,836 - MPMX19_03780 0.37 -1.9 21,907 + MPMX19_03780 0.45 -1.0 21,907 + MPMX19_03780 0.45 -1.4 21,907 + MPMX19_03780 0.45 +0.7 21,907 + MPMX19_03780 0.45 -0.2 21,907 + MPMX19_03780 0.45 +0.2 21,907 + MPMX19_03780 0.45 +0.2 21,907 + MPMX19_03780 0.45 +0.4 21,907 + MPMX19_03780 0.45 -0.1 21,907 + MPMX19_03780 0.45 -0.3 21,907 + MPMX19_03780 0.45 -1.4 21,907 + MPMX19_03780 0.45 +0.4 21,907 + MPMX19_03780 0.45 -0.5 21,908 - MPMX19_03780 0.45 -0.8 21,908 - MPMX19_03780 0.45 -0.0 21,908 - MPMX19_03780 0.45 +0.5 21,908 - MPMX19_03780 0.45 -0.5 21,908 - MPMX19_03780 0.45 -1.6 21,908 - MPMX19_03780 0.45 -1.9 21,908 - MPMX19_03780 0.45 -0.8 21,908 - MPMX19_03780 0.45 +0.6 21,908 - MPMX19_03780 0.45 -0.8 21,908 - MPMX19_03780 0.45 -1.8 21,908 - MPMX19_03780 0.45 -0.7 22,066 + MPMX19_03780 0.62 +0.2 22,066 + MPMX19_03780 0.62 -0.4 22,066 + MPMX19_03780 0.62 +0.1 22,066 + MPMX19_03780 0.62 -2.7 22,066 + MPMX19_03780 0.62 -1.3 22,066 + MPMX19_03780 0.62 -0.0 22,066 + MPMX19_03780 0.62 -0.8 22,066 + MPMX19_03780 0.62 -2.4 22,066 + MPMX19_03780 0.62 +0.5 22,067 - MPMX19_03780 0.62 +0.8 22,067 - MPMX19_03780 0.62 -0.2 22,067 - MPMX19_03780 0.62 -1.7 22,067 - MPMX19_03780 0.62 -1.4 22,067 - MPMX19_03780 0.62 -0.6 22,067 - MPMX19_03780 0.62 -0.9 22,067 - MPMX19_03780 0.62 -1.4 22,067 - MPMX19_03780 0.62 +0.5 22,067 - MPMX19_03780 0.62 -0.2 22,067 - MPMX19_03780 0.62 -0.4 22,067 - MPMX19_03780 0.62 -0.9 22,067 - MPMX19_03780 0.62 -1.1
Or see this region's nucleotide sequence