Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_03592

Experiment: NF

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NF
1,015,627	+				+0.2
1,015,629	+				-0.3
1,015,630	-				-1.7
1,015,649	+				+0.0
1,015,649	+				-1.3
1,015,649	+				-0.2
1,015,649	+				-1.2
1,015,650	-				-1.5
1,015,650	-				-0.4
1,015,665	+				+0.0
1,015,665	+				-1.2
1,015,665	+				-0.6
1,015,665	+				-0.8
1,015,665	+				-0.1
1,015,665	+				-1.2
1,015,665	+				-1.7
1,015,665	+				-1.8
1,015,665	+				+0.6
1,015,666	-				-0.3
1,015,666	-				-1.8
1,015,666	-				+0.6
1,015,666	-				-0.6
1,015,666	-				-1.7
1,015,666	-				-1.5
1,015,666	-				-1.1
1,015,666	-				-1.9
1,015,666	-				-2.3
1,015,667	+				-0.7
1,015,667	+				+0.5
1,015,667	+				+0.0
1,015,667	+				+0.6
1,015,668	-				-1.8
1,015,668	-				-0.5
1,015,774	+		MPMX19_03591	0.12	-1.2
1,015,933	+		MPMX19_03591	0.32	-0.5
1,015,933	+		MPMX19_03591	0.32	-0.3
1,015,933	+		MPMX19_03591	0.32	-0.2
1,015,934	-		MPMX19_03591	0.32	-0.4
1,015,934	-		MPMX19_03591	0.32	-0.6
1,015,934	-		MPMX19_03591	0.32	-0.7
1,015,934	-		MPMX19_03591	0.32	-0.3
1,015,934	-		MPMX19_03591	0.32	-1.7
1,015,934	-		MPMX19_03591	0.32	-0.4
1,016,015	-		MPMX19_03591	0.42	-1.2
1,016,188	+		MPMX19_03591	0.64	-1.0
1,016,188	+		MPMX19_03591	0.64	+0.4
1,016,188	+		MPMX19_03591	0.64	+1.0
1,016,188	+		MPMX19_03591	0.64	-1.5
1,016,189	-		MPMX19_03591	0.65	-0.4
1,016,365	+		MPMX19_03591	0.87	-0.1
1,016,366	-		MPMX19_03591	0.87	-1.3
1,016,366	-		MPMX19_03591	0.87	-0.4
1,016,366	-		MPMX19_03591	0.87	-0.2
1,016,517	+				-1.5
1,016,517	+				-0.5
1,016,518	-				-0.5
1,016,518	-				+0.8
1,016,518	-				-0.8
1,016,623	+				+0.1
1,016,623	+				-0.3
1,016,623	+				-0.5
1,016,673	-				+1.4
1,017,183	+		MPMX19_03592	0.30	-2.3
1,017,183	+		MPMX19_03592	0.30	-1.0
1,017,859	+		MPMX19_03592	0.63	+0.0
1,017,860	-		MPMX19_03592	0.64	-1.8
1,017,901	+		MPMX19_03592	0.66	+0.3
1,017,901	+		MPMX19_03592	0.66	-1.3
1,017,901	+		MPMX19_03592	0.66	-0.5
1,017,902	-		MPMX19_03592	0.66	+1.0
1,017,902	-		MPMX19_03592	0.66	+0.9
1,018,029	+		MPMX19_03592	0.72	-0.3
1,018,029	+		MPMX19_03592	0.72	+0.8
1,018,029	+		MPMX19_03592	0.72	+0.0
1,018,029	+		MPMX19_03592	0.72	+0.2
1,018,029	+		MPMX19_03592	0.72	-0.7
1,018,030	-		MPMX19_03592	0.72	-0.4
1,018,030	-		MPMX19_03592	0.72	-1.0
1,018,030	-		MPMX19_03592	0.72	-1.1
1,018,030	-		MPMX19_03592	0.72	-0.7
1,018,030	-		MPMX19_03592	0.72	-0.7
1,018,030	-		MPMX19_03592	0.72	-1.7
1,018,030	-		MPMX19_03592	0.72	-2.0
1,018,030	-		MPMX19_03592	0.72	-1.8
1,018,030	-		MPMX19_03592	0.72	-0.6
1,018,030	-		MPMX19_03592	0.72	+0.0
1,018,030	-		MPMX19_03592	0.72	-3.3
1,018,106	+		MPMX19_03592	0.76	-0.3
1,018,106	+		MPMX19_03592	0.76	-2.0
1,018,106	+		MPMX19_03592	0.76	-0.1
1,018,107	-		MPMX19_03592	0.76	+0.0
1,018,107	-		MPMX19_03592	0.76	-1.0
1,018,107	-		MPMX19_03592	0.76	+0.0
1,018,107	-		MPMX19_03592	0.76	-1.0
1,018,211	+		MPMX19_03592	0.81	-0.8
1,018,211	+		MPMX19_03592	0.81	-1.2
1,018,211	+		MPMX19_03592	0.81	-1.4
1,018,211	+		MPMX19_03592	0.81	-0.1
1,018,211	+		MPMX19_03592	0.81	-2.1
1,018,211	+		MPMX19_03592	0.81	-1.0
1,018,211	+		MPMX19_03592	0.81	-1.7
1,018,211	+		MPMX19_03592	0.81	+0.6
1,018,211	+		MPMX19_03592	0.81	+1.6
1,018,211	+		MPMX19_03592	0.81	-1.1
1,018,211	+		MPMX19_03592	0.81	-1.0
1,018,212	-		MPMX19_03592	0.81	+0.1
1,018,212	-		MPMX19_03592	0.81	-0.8
1,018,212	-		MPMX19_03592	0.81	+0.5
1,018,212	-		MPMX19_03592	0.81	+0.5
1,018,212	-		MPMX19_03592	0.81	+0.0
1,018,212	-		MPMX19_03592	0.81	-0.3
1,018,212	-		MPMX19_03592	0.81	-1.0
1,018,212	-		MPMX19_03592	0.81	-0.5
1,018,212	-		MPMX19_03592	0.81	-1.6
1,018,212	-		MPMX19_03592	0.81	-2.2
1,018,212	-		MPMX19_03592	0.81	-1.0
1,018,212	-		MPMX19_03592	0.81	-1.7
1,018,212	-		MPMX19_03592	0.81	+0.2
1,018,212	-		MPMX19_03592	0.81	-0.7
1,018,212	-		MPMX19_03592	0.81	+0.8
1,018,212	-		MPMX19_03592	0.81	-0.7
1,018,212	-		MPMX19_03592	0.81	-0.2
1,018,212	-		MPMX19_03592	0.81	-0.9
1,018,212	-		MPMX19_03592	0.81	-1.1
1,018,213	+		MPMX19_03592	0.81	+0.8
1,018,213	+		MPMX19_03592	0.81	-1.4
1,018,213	+		MPMX19_03592	0.81	-0.2
1,018,213	+		MPMX19_03592	0.81	+0.0
1,018,213	+		MPMX19_03592	0.81	-1.5
1,018,213	+		MPMX19_03592	0.81	+0.2
1,018,213	+		MPMX19_03592	0.81	+0.3
1,018,214	-		MPMX19_03592	0.81	+0.2
1,018,214	-		MPMX19_03592	0.81	-0.3
1,018,214	-		MPMX19_03592	0.81	-0.8
1,018,214	-		MPMX19_03592	0.81	+0.2
1,018,279	+		MPMX19_03592	0.84	+0.6
1,018,279	+		MPMX19_03592	0.84	-1.3
1,018,279	+		MPMX19_03592	0.84	-0.0
1,018,280	-		MPMX19_03592	0.84	+0.3
1,018,280	-		MPMX19_03592	0.84	+0.6
1,018,280	-		MPMX19_03592	0.84	-0.2
1,018,441	+				-0.7
1,018,442	-				-1.1
1,018,442	-				+0.9
1,018,480	+				+0.5
1,018,481	-				+0.3
1,018,481	-				-0.4
1,018,625	+				+0.6
1,018,625	+				-0.4
1,018,625	+				-1.5
1,018,626	-				+0.6
1,018,657	-				-0.2
1,018,657	-				-0.5
1,018,657	-				-1.0
1,018,657	-				-1.2
1,018,657	-				-0.3
1,018,657	-				-1.2
1,018,657	-				-2.5
1,018,686	+				+0.8
1,018,687	-				+0.3
1,018,687	-				+0.5
1,018,742	-				-0.8
1,018,742	-				+0.7
1,018,820	+				-1.0
1,018,821	-				-0.4
1,018,859	-				-1.7
1,018,885	-				-0.9
1,018,904	+				-1.0
1,018,968	+				+0.0
1,018,976	+				-1.2
1,019,022	+				+0.9
1,019,390	+		MPMX19_03593	0.30	-1.2
1,019,390	+		MPMX19_03593	0.30	+0.4
1,019,391	-		MPMX19_03593	0.30	-0.8