Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_03451 and MPMX19_03452 are separated by 34 nucleotides MPMX19_03452 and MPMX19_03453 overlap by 1 nucleotides MPMX19_03453 and MPMX19_03454 are separated by 67 nucleotides
MPMX19_03451: MPMX19_03451 - hypothetical protein, at 846,888 to 849,251
_03451
MPMX19_03452: MPMX19_03452 - Putative aliphatic sulfonates transport permease protein SsuC, at 849,286 to 850,029
_03452
MPMX19_03453: MPMX19_03453 - Putative aliphatic sulfonates-binding protein, at 850,029 to 851,048
_03453
MPMX19_03454: MPMX19_03454 - Nitrate import ATP-binding protein NrtC, at 851,116 to 851,949
_03454
Position (kb) 850
851
852 Strain fitness (log2 ratio) -2
-1
0
1 at 849.280 kb on - strand at 849.280 kb on - strand at 849.540 kb on - strand, within MPMX19_03452 at 849.540 kb on - strand, within MPMX19_03452 at 849.540 kb on - strand, within MPMX19_03452 at 849.540 kb on - strand, within MPMX19_03452 at 849.837 kb on + strand, within MPMX19_03452 at 849.837 kb on + strand, within MPMX19_03452 at 849.837 kb on + strand, within MPMX19_03452 at 849.838 kb on - strand, within MPMX19_03452 at 849.838 kb on - strand, within MPMX19_03452 at 849.948 kb on - strand, within MPMX19_03452 at 849.948 kb on - strand, within MPMX19_03452 at 849.948 kb on - strand, within MPMX19_03452 at 850.013 kb on + strand at 850.052 kb on - strand at 850.052 kb on - strand at 850.052 kb on - strand at 850.052 kb on - strand at 850.052 kb on - strand at 850.052 kb on - strand at 850.221 kb on - strand, within MPMX19_03453 at 850.353 kb on - strand, within MPMX19_03453 at 850.388 kb on - strand, within MPMX19_03453 at 850.388 kb on - strand, within MPMX19_03453 at 850.388 kb on - strand, within MPMX19_03453 at 850.709 kb on - strand, within MPMX19_03453 at 850.709 kb on - strand, within MPMX19_03453 at 850.760 kb on - strand, within MPMX19_03453 at 850.760 kb on - strand, within MPMX19_03453 at 850.779 kb on - strand, within MPMX19_03453 at 850.779 kb on - strand, within MPMX19_03453 at 850.874 kb on - strand, within MPMX19_03453 at 850.874 kb on - strand, within MPMX19_03453 at 850.874 kb on - strand, within MPMX19_03453 at 850.874 kb on - strand, within MPMX19_03453 at 851.008 kb on + strand at 851.008 kb on + strand at 851.651 kb on + strand, within MPMX19_03454 at 851.651 kb on + strand, within MPMX19_03454 at 851.651 kb on + strand, within MPMX19_03454 at 851.651 kb on + strand, within MPMX19_03454 at 851.651 kb on + strand, within MPMX19_03454 at 851.651 kb on + strand, within MPMX19_03454 at 851.652 kb on - strand, within MPMX19_03454 at 851.652 kb on - strand, within MPMX19_03454 at 851.652 kb on - strand, within MPMX19_03454 at 851.843 kb on + strand, within MPMX19_03454 at 851.843 kb on + strand, within MPMX19_03454 at 851.843 kb on + strand, within MPMX19_03454 at 851.844 kb on - strand, within MPMX19_03454
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 849,280 - -0.9 849,280 - +1.2 849,540 - MPMX19_03452 0.34 -0.7 849,540 - MPMX19_03452 0.34 -0.5 849,540 - MPMX19_03452 0.34 -2.2 849,540 - MPMX19_03452 0.34 +0.6 849,837 + MPMX19_03452 0.74 -0.6 849,837 + MPMX19_03452 0.74 -0.3 849,837 + MPMX19_03452 0.74 -2.0 849,838 - MPMX19_03452 0.74 -1.9 849,838 - MPMX19_03452 0.74 +0.4 849,948 - MPMX19_03452 0.89 -0.8 849,948 - MPMX19_03452 0.89 -0.4 849,948 - MPMX19_03452 0.89 +0.4 850,013 + -0.4 850,052 - +0.2 850,052 - -1.0 850,052 - -0.8 850,052 - -0.3 850,052 - -0.9 850,052 - -0.9 850,221 - MPMX19_03453 0.19 +0.2 850,353 - MPMX19_03453 0.32 -0.6 850,388 - MPMX19_03453 0.35 -0.4 850,388 - MPMX19_03453 0.35 -0.0 850,388 - MPMX19_03453 0.35 -1.9 850,709 - MPMX19_03453 0.67 -1.6 850,709 - MPMX19_03453 0.67 -1.6 850,760 - MPMX19_03453 0.72 -2.0 850,760 - MPMX19_03453 0.72 -1.6 850,779 - MPMX19_03453 0.74 -1.0 850,779 - MPMX19_03453 0.74 +0.3 850,874 - MPMX19_03453 0.83 -0.2 850,874 - MPMX19_03453 0.83 -1.4 850,874 - MPMX19_03453 0.83 +0.4 850,874 - MPMX19_03453 0.83 -1.2 851,008 + -1.3 851,008 + +0.6 851,651 + MPMX19_03454 0.64 -0.4 851,651 + MPMX19_03454 0.64 -0.7 851,651 + MPMX19_03454 0.64 -2.0 851,651 + MPMX19_03454 0.64 -1.0 851,651 + MPMX19_03454 0.64 -0.1 851,651 + MPMX19_03454 0.64 +0.1 851,652 - MPMX19_03454 0.64 -0.8 851,652 - MPMX19_03454 0.64 -1.9 851,652 - MPMX19_03454 0.64 -0.8 851,843 + MPMX19_03454 0.87 -2.4 851,843 + MPMX19_03454 0.87 -1.1 851,843 + MPMX19_03454 0.87 -1.3 851,844 - MPMX19_03454 0.87 -0.7
Or see this region's nucleotide sequence