Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_03290 and MPMX19_03291 are separated by 41 nucleotides MPMX19_03291 and MPMX19_03292 are separated by 114 nucleotides MPMX19_03292 and MPMX19_03293 are separated by 43 nucleotides
MPMX19_03290: MPMX19_03290 - hypothetical protein, at 637,734 to 638,378
_03290
MPMX19_03291: MPMX19_03291 - hypothetical protein, at 638,420 to 639,148
_03291
MPMX19_03292: MPMX19_03292 - hypothetical protein, at 639,263 to 639,808
_03292
MPMX19_03293: MPMX19_03293 - Taurine--pyruvate aminotransferase, at 639,852 to 641,168
_03293
Position (kb) 638
639
640 Strain fitness (log2 ratio) -2
-1
0
1
2 at 637.433 kb on - strand at 637.464 kb on + strand at 637.465 kb on - strand at 637.465 kb on - strand at 637.469 kb on - strand at 637.472 kb on - strand at 637.472 kb on - strand at 637.493 kb on + strand at 637.493 kb on + strand at 637.513 kb on + strand at 637.514 kb on - strand at 637.618 kb on + strand at 637.618 kb on + strand at 637.619 kb on - strand at 638.376 kb on + strand at 638.376 kb on + strand at 638.376 kb on + strand at 638.491 kb on + strand at 638.491 kb on + strand at 638.491 kb on + strand at 638.491 kb on + strand at 638.491 kb on + strand at 638.491 kb on + strand at 638.491 kb on + strand at 638.491 kb on + strand at 638.491 kb on + strand at 638.492 kb on - strand at 638.492 kb on - strand at 638.492 kb on - strand at 638.669 kb on + strand, within MPMX19_03291 at 638.669 kb on + strand, within MPMX19_03291 at 638.669 kb on + strand, within MPMX19_03291 at 638.669 kb on + strand, within MPMX19_03291 at 638.669 kb on + strand, within MPMX19_03291 at 638.669 kb on + strand, within MPMX19_03291 at 638.669 kb on + strand, within MPMX19_03291 at 638.669 kb on + strand, within MPMX19_03291 at 638.670 kb on - strand, within MPMX19_03291 at 638.670 kb on - strand, within MPMX19_03291 at 638.670 kb on - strand, within MPMX19_03291 at 638.670 kb on - strand, within MPMX19_03291 at 638.670 kb on - strand, within MPMX19_03291 at 638.675 kb on + strand, within MPMX19_03291 at 638.675 kb on + strand, within MPMX19_03291 at 638.675 kb on + strand, within MPMX19_03291 at 638.675 kb on + strand, within MPMX19_03291 at 638.675 kb on + strand, within MPMX19_03291 at 638.675 kb on + strand, within MPMX19_03291 at 638.675 kb on + strand, within MPMX19_03291 at 638.675 kb on + strand, within MPMX19_03291 at 638.676 kb on - strand, within MPMX19_03291 at 638.676 kb on - strand, within MPMX19_03291 at 638.676 kb on - strand, within MPMX19_03291 at 638.676 kb on - strand, within MPMX19_03291 at 638.676 kb on - strand, within MPMX19_03291 at 638.676 kb on - strand, within MPMX19_03291 at 638.676 kb on - strand, within MPMX19_03291 at 638.676 kb on - strand, within MPMX19_03291 at 638.781 kb on - strand, within MPMX19_03291 at 638.942 kb on + strand, within MPMX19_03291 at 638.942 kb on + strand, within MPMX19_03291 at 639.146 kb on + strand at 639.147 kb on - strand at 639.147 kb on - strand at 639.147 kb on - strand at 639.147 kb on - strand at 639.147 kb on - strand at 639.147 kb on - strand at 639.147 kb on - strand at 639.254 kb on + strand at 639.254 kb on + strand at 639.254 kb on + strand at 639.254 kb on + strand at 639.255 kb on - strand at 639.497 kb on + strand, within MPMX19_03292 at 639.736 kb on + strand, within MPMX19_03292 at 639.736 kb on + strand, within MPMX19_03292 at 639.737 kb on - strand, within MPMX19_03292 at 639.743 kb on + strand, within MPMX19_03292 at 639.743 kb on + strand, within MPMX19_03292 at 639.744 kb on - strand, within MPMX19_03292
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 637,433 - -2.4 637,464 + -0.5 637,465 - -0.6 637,465 - -1.3 637,469 - -0.5 637,472 - +0.4 637,472 - +0.0 637,493 + +1.2 637,493 + +1.9 637,513 + -0.4 637,514 - -0.7 637,618 + -1.0 637,618 + -1.0 637,619 - -0.4 638,376 + -0.6 638,376 + -1.7 638,376 + -0.8 638,491 + +1.2 638,491 + -0.3 638,491 + +0.4 638,491 + -0.8 638,491 + -2.3 638,491 + -0.2 638,491 + -0.6 638,491 + -0.5 638,491 + -0.6 638,492 - +0.3 638,492 - -0.9 638,492 - +0.1 638,669 + MPMX19_03291 0.34 -0.5 638,669 + MPMX19_03291 0.34 -0.1 638,669 + MPMX19_03291 0.34 -1.0 638,669 + MPMX19_03291 0.34 -0.7 638,669 + MPMX19_03291 0.34 -1.3 638,669 + MPMX19_03291 0.34 +0.4 638,669 + MPMX19_03291 0.34 -1.6 638,669 + MPMX19_03291 0.34 +0.6 638,670 - MPMX19_03291 0.34 -0.3 638,670 - MPMX19_03291 0.34 +0.2 638,670 - MPMX19_03291 0.34 -1.1 638,670 - MPMX19_03291 0.34 +0.0 638,670 - MPMX19_03291 0.34 -1.6 638,675 + MPMX19_03291 0.35 -0.5 638,675 + MPMX19_03291 0.35 +0.4 638,675 + MPMX19_03291 0.35 -0.4 638,675 + MPMX19_03291 0.35 +0.3 638,675 + MPMX19_03291 0.35 -0.4 638,675 + MPMX19_03291 0.35 -1.8 638,675 + MPMX19_03291 0.35 -1.1 638,675 + MPMX19_03291 0.35 -0.4 638,676 - MPMX19_03291 0.35 -0.3 638,676 - MPMX19_03291 0.35 -0.2 638,676 - MPMX19_03291 0.35 -2.2 638,676 - MPMX19_03291 0.35 +0.8 638,676 - MPMX19_03291 0.35 +0.0 638,676 - MPMX19_03291 0.35 -0.4 638,676 - MPMX19_03291 0.35 -2.0 638,676 - MPMX19_03291 0.35 -2.1 638,781 - MPMX19_03291 0.50 -1.3 638,942 + MPMX19_03291 0.72 -0.7 638,942 + MPMX19_03291 0.72 +0.0 639,146 + -1.0 639,147 - +0.8 639,147 - +1.6 639,147 - -1.4 639,147 - +0.1 639,147 - -1.8 639,147 - -2.2 639,147 - -0.4 639,254 + -0.4 639,254 + -0.8 639,254 + -0.1 639,254 + -0.1 639,255 - -2.7 639,497 + MPMX19_03292 0.43 -1.4 639,736 + MPMX19_03292 0.87 -0.4 639,736 + MPMX19_03292 0.87 +0.0 639,737 - MPMX19_03292 0.87 -0.5 639,743 + MPMX19_03292 0.88 +0.0 639,743 + MPMX19_03292 0.88 -0.4 639,744 - MPMX19_03292 0.88 -1.2
Or see this region's nucleotide sequence