Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_03263 and MPMX19_03264 are separated by 11 nucleotides MPMX19_03264 and MPMX19_03265 overlap by 4 nucleotides
MPMX19_03263: MPMX19_03263 - hypothetical protein, at 604,965 to 606,041
_03263
MPMX19_03264: MPMX19_03264 - hypothetical protein, at 606,053 to 608,230
_03264
MPMX19_03265: MPMX19_03265 - Spermidine/putrescine import ATP-binding protein PotA, at 608,227 to 609,399
_03265
Position (kb)
606
607
608
609 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 605.103 kb on + strand, within MPMX19_03263 at 605.104 kb on - strand, within MPMX19_03263 at 605.205 kb on + strand, within MPMX19_03263 at 605.205 kb on + strand, within MPMX19_03263 at 605.205 kb on + strand, within MPMX19_03263 at 605.205 kb on + strand, within MPMX19_03263 at 605.205 kb on + strand, within MPMX19_03263 at 605.206 kb on - strand, within MPMX19_03263 at 605.206 kb on - strand, within MPMX19_03263 at 605.206 kb on - strand, within MPMX19_03263 at 605.206 kb on - strand, within MPMX19_03263 at 605.206 kb on - strand, within MPMX19_03263 at 605.206 kb on - strand, within MPMX19_03263 at 605.206 kb on - strand, within MPMX19_03263 at 605.206 kb on - strand, within MPMX19_03263 at 605.206 kb on - strand, within MPMX19_03263 at 605.206 kb on - strand, within MPMX19_03263 at 605.310 kb on + strand, within MPMX19_03263 at 605.310 kb on + strand, within MPMX19_03263 at 605.310 kb on + strand, within MPMX19_03263 at 605.310 kb on + strand, within MPMX19_03263 at 605.310 kb on + strand, within MPMX19_03263 at 605.310 kb on + strand, within MPMX19_03263 at 605.310 kb on + strand, within MPMX19_03263 at 605.310 kb on + strand, within MPMX19_03263 at 605.311 kb on - strand, within MPMX19_03263 at 605.311 kb on - strand, within MPMX19_03263 at 605.311 kb on - strand, within MPMX19_03263 at 605.311 kb on - strand, within MPMX19_03263 at 605.311 kb on - strand, within MPMX19_03263 at 605.311 kb on - strand, within MPMX19_03263 at 605.311 kb on - strand, within MPMX19_03263 at 605.311 kb on - strand, within MPMX19_03263 at 605.311 kb on - strand, within MPMX19_03263 at 605.337 kb on + strand, within MPMX19_03263 at 605.337 kb on + strand, within MPMX19_03263 at 605.338 kb on - strand, within MPMX19_03263 at 605.338 kb on - strand, within MPMX19_03263 at 605.338 kb on - strand, within MPMX19_03263 at 605.391 kb on + strand, within MPMX19_03263 at 605.391 kb on + strand, within MPMX19_03263 at 605.391 kb on + strand, within MPMX19_03263 at 605.391 kb on + strand, within MPMX19_03263 at 605.391 kb on + strand, within MPMX19_03263 at 605.391 kb on + strand, within MPMX19_03263 at 605.391 kb on + strand, within MPMX19_03263 at 605.391 kb on + strand, within MPMX19_03263 at 605.391 kb on + strand, within MPMX19_03263 at 605.391 kb on + strand, within MPMX19_03263 at 605.391 kb on + strand, within MPMX19_03263 at 605.391 kb on + strand, within MPMX19_03263 at 605.392 kb on - strand, within MPMX19_03263 at 605.392 kb on - strand, within MPMX19_03263 at 605.392 kb on - strand, within MPMX19_03263 at 605.392 kb on - strand, within MPMX19_03263 at 605.392 kb on - strand, within MPMX19_03263 at 605.392 kb on - strand, within MPMX19_03263 at 605.392 kb on - strand, within MPMX19_03263 at 605.392 kb on - strand, within MPMX19_03263 at 605.392 kb on - strand, within MPMX19_03263 at 605.392 kb on - strand, within MPMX19_03263 at 605.392 kb on - strand, within MPMX19_03263 at 605.392 kb on - strand, within MPMX19_03263 at 605.415 kb on + strand, within MPMX19_03263 at 605.415 kb on + strand, within MPMX19_03263 at 605.415 kb on + strand, within MPMX19_03263 at 605.416 kb on - strand, within MPMX19_03263 at 605.416 kb on - strand, within MPMX19_03263 at 605.417 kb on + strand, within MPMX19_03263 at 605.417 kb on + strand, within MPMX19_03263 at 605.417 kb on + strand, within MPMX19_03263 at 605.418 kb on - strand, within MPMX19_03263 at 605.418 kb on - strand, within MPMX19_03263 at 605.418 kb on - strand, within MPMX19_03263 at 605.536 kb on - strand, within MPMX19_03263 at 605.536 kb on - strand, within MPMX19_03263 at 605.622 kb on + strand, within MPMX19_03263 at 605.622 kb on + strand, within MPMX19_03263 at 605.622 kb on + strand, within MPMX19_03263 at 605.622 kb on + strand, within MPMX19_03263 at 605.623 kb on - strand, within MPMX19_03263 at 605.623 kb on - strand, within MPMX19_03263 at 605.826 kb on + strand, within MPMX19_03263 at 605.826 kb on + strand, within MPMX19_03263 at 605.827 kb on - strand, within MPMX19_03263 at 605.827 kb on - strand, within MPMX19_03263 at 606.039 kb on + strand at 606.039 kb on + strand at 606.039 kb on + strand at 606.039 kb on + strand at 606.039 kb on + strand at 606.039 kb on + strand at 606.040 kb on - strand at 606.040 kb on - strand at 606.040 kb on - strand at 606.040 kb on - strand at 606.040 kb on - strand at 606.417 kb on - strand, within MPMX19_03264 at 606.926 kb on + strand, within MPMX19_03264 at 606.926 kb on + strand, within MPMX19_03264 at 606.927 kb on - strand, within MPMX19_03264 at 607.205 kb on + strand, within MPMX19_03264 at 607.205 kb on + strand, within MPMX19_03264 at 607.205 kb on + strand, within MPMX19_03264 at 607.206 kb on - strand, within MPMX19_03264 at 607.206 kb on - strand, within MPMX19_03264 at 607.206 kb on - strand, within MPMX19_03264 at 607.206 kb on - strand, within MPMX19_03264 at 607.322 kb on + strand, within MPMX19_03264 at 607.322 kb on + strand, within MPMX19_03264 at 607.322 kb on + strand, within MPMX19_03264 at 607.323 kb on - strand, within MPMX19_03264 at 607.436 kb on + strand, within MPMX19_03264 at 607.437 kb on - strand, within MPMX19_03264 at 607.437 kb on - strand, within MPMX19_03264 at 607.437 kb on - strand, within MPMX19_03264 at 607.506 kb on - strand, within MPMX19_03264 at 607.506 kb on - strand, within MPMX19_03264 at 607.643 kb on + strand, within MPMX19_03264 at 607.644 kb on - strand, within MPMX19_03264 at 607.739 kb on + strand, within MPMX19_03264 at 607.739 kb on + strand, within MPMX19_03264 at 607.739 kb on + strand, within MPMX19_03264 at 607.739 kb on + strand, within MPMX19_03264 at 607.739 kb on + strand, within MPMX19_03264 at 607.739 kb on + strand, within MPMX19_03264 at 607.974 kb on - strand, within MPMX19_03264 at 607.974 kb on - strand, within MPMX19_03264 at 608.033 kb on + strand at 608.033 kb on + strand at 608.033 kb on + strand at 608.033 kb on + strand at 608.034 kb on - strand at 608.034 kb on - strand at 608.034 kb on - strand at 608.034 kb on - strand at 608.051 kb on + strand at 608.051 kb on + strand at 608.051 kb on + strand at 608.051 kb on + strand at 608.051 kb on + strand at 608.051 kb on + strand at 608.052 kb on - strand at 608.052 kb on - strand at 608.052 kb on - strand at 608.052 kb on - strand at 608.052 kb on - strand at 608.052 kb on - strand at 608.081 kb on + strand at 608.082 kb on - strand at 608.099 kb on + strand at 608.099 kb on + strand at 608.099 kb on + strand at 608.100 kb on - strand at 608.100 kb on - strand at 608.345 kb on - strand, within MPMX19_03265 at 608.557 kb on + strand, within MPMX19_03265 at 608.557 kb on + strand, within MPMX19_03265 at 608.557 kb on + strand, within MPMX19_03265 at 608.557 kb on + strand, within MPMX19_03265 at 608.557 kb on + strand, within MPMX19_03265 at 608.558 kb on - strand, within MPMX19_03265 at 608.558 kb on - strand, within MPMX19_03265 at 608.558 kb on - strand, within MPMX19_03265 at 608.558 kb on - strand, within MPMX19_03265 at 608.558 kb on - strand, within MPMX19_03265 at 608.600 kb on - strand, within MPMX19_03265 at 608.600 kb on - strand, within MPMX19_03265 at 608.660 kb on + strand, within MPMX19_03265 at 608.660 kb on + strand, within MPMX19_03265 at 608.660 kb on + strand, within MPMX19_03265 at 608.660 kb on + strand, within MPMX19_03265 at 608.660 kb on + strand, within MPMX19_03265 at 608.661 kb on - strand, within MPMX19_03265 at 608.661 kb on - strand, within MPMX19_03265 at 608.661 kb on - strand, within MPMX19_03265 at 608.872 kb on + strand, within MPMX19_03265 at 608.872 kb on + strand, within MPMX19_03265 at 608.872 kb on + strand, within MPMX19_03265 at 608.872 kb on + strand, within MPMX19_03265 at 608.872 kb on + strand, within MPMX19_03265 at 608.872 kb on + strand, within MPMX19_03265 at 608.872 kb on + strand, within MPMX19_03265 at 608.873 kb on - strand, within MPMX19_03265 at 608.873 kb on - strand, within MPMX19_03265 at 608.873 kb on - strand, within MPMX19_03265 at 608.873 kb on - strand, within MPMX19_03265 at 608.971 kb on + strand, within MPMX19_03265 at 608.972 kb on - strand, within MPMX19_03265
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 605,103 + MPMX19_03263 0.13 -0.7 605,104 - MPMX19_03263 0.13 +0.3 605,205 + MPMX19_03263 0.22 -1.8 605,205 + MPMX19_03263 0.22 -0.2 605,205 + MPMX19_03263 0.22 -1.4 605,205 + MPMX19_03263 0.22 -2.0 605,205 + MPMX19_03263 0.22 -0.5 605,206 - MPMX19_03263 0.22 -0.6 605,206 - MPMX19_03263 0.22 -0.1 605,206 - MPMX19_03263 0.22 -0.9 605,206 - MPMX19_03263 0.22 -1.7 605,206 - MPMX19_03263 0.22 +0.2 605,206 - MPMX19_03263 0.22 -0.4 605,206 - MPMX19_03263 0.22 -1.3 605,206 - MPMX19_03263 0.22 -0.7 605,206 - MPMX19_03263 0.22 -1.2 605,206 - MPMX19_03263 0.22 +0.3 605,310 + MPMX19_03263 0.32 -1.4 605,310 + MPMX19_03263 0.32 +0.9 605,310 + MPMX19_03263 0.32 -1.0 605,310 + MPMX19_03263 0.32 +0.4 605,310 + MPMX19_03263 0.32 -1.5 605,310 + MPMX19_03263 0.32 -0.5 605,310 + MPMX19_03263 0.32 -1.0 605,310 + MPMX19_03263 0.32 -1.5 605,311 - MPMX19_03263 0.32 -1.8 605,311 - MPMX19_03263 0.32 +0.4 605,311 - MPMX19_03263 0.32 -1.7 605,311 - MPMX19_03263 0.32 -0.8 605,311 - MPMX19_03263 0.32 -1.8 605,311 - MPMX19_03263 0.32 -0.1 605,311 - MPMX19_03263 0.32 -1.0 605,311 - MPMX19_03263 0.32 -1.0 605,311 - MPMX19_03263 0.32 +0.6 605,337 + MPMX19_03263 0.35 -0.7 605,337 + MPMX19_03263 0.35 -1.5 605,338 - MPMX19_03263 0.35 +0.0 605,338 - MPMX19_03263 0.35 -0.7 605,338 - MPMX19_03263 0.35 +0.7 605,391 + MPMX19_03263 0.40 -0.1 605,391 + MPMX19_03263 0.40 -2.5 605,391 + MPMX19_03263 0.40 -1.3 605,391 + MPMX19_03263 0.40 +0.3 605,391 + MPMX19_03263 0.40 -0.3 605,391 + MPMX19_03263 0.40 -0.5 605,391 + MPMX19_03263 0.40 +0.7 605,391 + MPMX19_03263 0.40 +0.2 605,391 + MPMX19_03263 0.40 +1.4 605,391 + MPMX19_03263 0.40 -1.1 605,391 + MPMX19_03263 0.40 +0.0 605,391 + MPMX19_03263 0.40 +1.6 605,392 - MPMX19_03263 0.40 +0.4 605,392 - MPMX19_03263 0.40 -0.8 605,392 - MPMX19_03263 0.40 -2.2 605,392 - MPMX19_03263 0.40 +0.0 605,392 - MPMX19_03263 0.40 -1.9 605,392 - MPMX19_03263 0.40 -0.0 605,392 - MPMX19_03263 0.40 -0.1 605,392 - MPMX19_03263 0.40 -0.5 605,392 - MPMX19_03263 0.40 +1.1 605,392 - MPMX19_03263 0.40 -0.8 605,392 - MPMX19_03263 0.40 -1.6 605,392 - MPMX19_03263 0.40 -0.8 605,415 + MPMX19_03263 0.42 -0.8 605,415 + MPMX19_03263 0.42 -0.1 605,415 + MPMX19_03263 0.42 -0.3 605,416 - MPMX19_03263 0.42 -0.3 605,416 - MPMX19_03263 0.42 +1.2 605,417 + MPMX19_03263 0.42 -0.3 605,417 + MPMX19_03263 0.42 -2.6 605,417 + MPMX19_03263 0.42 -0.4 605,418 - MPMX19_03263 0.42 -1.3 605,418 - MPMX19_03263 0.42 +0.1 605,418 - MPMX19_03263 0.42 -0.4 605,536 - MPMX19_03263 0.53 +0.6 605,536 - MPMX19_03263 0.53 +0.4 605,622 + MPMX19_03263 0.61 +0.5 605,622 + MPMX19_03263 0.61 +1.4 605,622 + MPMX19_03263 0.61 -1.8 605,622 + MPMX19_03263 0.61 +0.0 605,623 - MPMX19_03263 0.61 +0.9 605,623 - MPMX19_03263 0.61 -2.0 605,826 + MPMX19_03263 0.80 -1.0 605,826 + MPMX19_03263 0.80 -1.5 605,827 - MPMX19_03263 0.80 +0.4 605,827 - MPMX19_03263 0.80 -2.5 606,039 + +0.0 606,039 + -2.5 606,039 + +0.5 606,039 + +0.8 606,039 + -1.2 606,039 + +0.2 606,040 - -2.3 606,040 - -0.3 606,040 - -1.2 606,040 - +2.2 606,040 - -1.5 606,417 - MPMX19_03264 0.17 -1.0 606,926 + MPMX19_03264 0.40 -0.2 606,926 + MPMX19_03264 0.40 +0.9 606,927 - MPMX19_03264 0.40 +0.6 607,205 + MPMX19_03264 0.53 -1.4 607,205 + MPMX19_03264 0.53 -2.0 607,205 + MPMX19_03264 0.53 -1.3 607,206 - MPMX19_03264 0.53 +0.0 607,206 - MPMX19_03264 0.53 -0.8 607,206 - MPMX19_03264 0.53 +0.2 607,206 - MPMX19_03264 0.53 -0.9 607,322 + MPMX19_03264 0.58 -0.3 607,322 + MPMX19_03264 0.58 -0.5 607,322 + MPMX19_03264 0.58 -1.1 607,323 - MPMX19_03264 0.58 +0.2 607,436 + MPMX19_03264 0.63 -1.5 607,437 - MPMX19_03264 0.64 -0.1 607,437 - MPMX19_03264 0.64 +1.6 607,437 - MPMX19_03264 0.64 -0.5 607,506 - MPMX19_03264 0.67 -0.8 607,506 - MPMX19_03264 0.67 +0.0 607,643 + MPMX19_03264 0.73 -0.3 607,644 - MPMX19_03264 0.73 -1.6 607,739 + MPMX19_03264 0.77 -0.6 607,739 + MPMX19_03264 0.77 +0.4 607,739 + MPMX19_03264 0.77 +0.9 607,739 + MPMX19_03264 0.77 -2.3 607,739 + MPMX19_03264 0.77 -0.1 607,739 + MPMX19_03264 0.77 -1.8 607,974 - MPMX19_03264 0.88 +0.0 607,974 - MPMX19_03264 0.88 -1.0 608,033 + +0.2 608,033 + -0.4 608,033 + -0.2 608,033 + -0.4 608,034 - -0.2 608,034 - -0.9 608,034 - -0.1 608,034 - -0.8 608,051 + -0.0 608,051 + -0.4 608,051 + -0.0 608,051 + -0.8 608,051 + -0.7 608,051 + +2.2 608,052 - -2.2 608,052 - -0.8 608,052 - -1.2 608,052 - -1.0 608,052 - +1.9 608,052 - -2.0 608,081 + -0.6 608,082 - -1.5 608,099 + -1.0 608,099 + -0.0 608,099 + -1.5 608,100 - -1.0 608,100 - -1.2 608,345 - MPMX19_03265 0.10 -0.7 608,557 + MPMX19_03265 0.28 -1.0 608,557 + MPMX19_03265 0.28 -0.8 608,557 + MPMX19_03265 0.28 +0.6 608,557 + MPMX19_03265 0.28 +0.0 608,557 + MPMX19_03265 0.28 -0.4 608,558 - MPMX19_03265 0.28 +0.7 608,558 - MPMX19_03265 0.28 -0.3 608,558 - MPMX19_03265 0.28 -0.3 608,558 - MPMX19_03265 0.28 +0.2 608,558 - MPMX19_03265 0.28 -1.2 608,600 - MPMX19_03265 0.32 +0.4 608,600 - MPMX19_03265 0.32 -0.8 608,660 + MPMX19_03265 0.37 -0.4 608,660 + MPMX19_03265 0.37 -1.1 608,660 + MPMX19_03265 0.37 +1.3 608,660 + MPMX19_03265 0.37 -0.4 608,660 + MPMX19_03265 0.37 +0.4 608,661 - MPMX19_03265 0.37 -0.1 608,661 - MPMX19_03265 0.37 +0.0 608,661 - MPMX19_03265 0.37 -1.0 608,872 + MPMX19_03265 0.55 +0.3 608,872 + MPMX19_03265 0.55 +0.8 608,872 + MPMX19_03265 0.55 -1.7 608,872 + MPMX19_03265 0.55 +0.0 608,872 + MPMX19_03265 0.55 -0.2 608,872 + MPMX19_03265 0.55 -1.2 608,872 + MPMX19_03265 0.55 -0.8 608,873 - MPMX19_03265 0.55 -1.1 608,873 - MPMX19_03265 0.55 +0.1 608,873 - MPMX19_03265 0.55 +0.9 608,873 - MPMX19_03265 0.55 -0.7 608,971 + MPMX19_03265 0.63 +0.6 608,972 - MPMX19_03265 0.64 +0.8
Or see this region's nucleotide sequence