Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_03244 and MPMX19_03245 are separated by 31 nucleotides MPMX19_03245 and MPMX19_03246 are separated by 6 nucleotides
MPMX19_03244: MPMX19_03244 - D-alanine--D-alanyl carrier protein ligase, at 566,054 to 583,993
_03244
MPMX19_03245: MPMX19_03245 - Carboxylesterase NlhH, at 584,025 to 584,999
_03245
MPMX19_03246: MPMX19_03246 - Ferrichrome outer membrane transporter/phage receptor, at 585,006 to 587,312
_03246
Position (kb) 584
585 Strain fitness (log2 ratio) -2
-1
0
1
2 at 583.200 kb on - strand at 583.200 kb on - strand at 583.200 kb on - strand at 583.313 kb on + strand at 583.313 kb on + strand at 583.314 kb on - strand at 583.314 kb on - strand at 583.314 kb on - strand at 583.314 kb on - strand at 583.314 kb on - strand at 583.314 kb on - strand at 583.314 kb on - strand at 583.314 kb on - strand at 583.314 kb on - strand at 583.352 kb on + strand at 583.352 kb on + strand at 583.352 kb on + strand at 583.352 kb on + strand at 583.352 kb on + strand at 583.352 kb on + strand at 583.352 kb on + strand at 583.353 kb on - strand at 583.353 kb on - strand at 583.353 kb on - strand at 583.353 kb on - strand at 583.353 kb on - strand at 583.353 kb on - strand at 583.353 kb on - strand at 583.353 kb on - strand at 583.353 kb on - strand at 583.353 kb on - strand at 583.974 kb on + strand at 583.974 kb on + strand at 583.974 kb on + strand at 584.016 kb on + strand at 584.016 kb on + strand at 584.016 kb on + strand at 584.241 kb on + strand, within MPMX19_03245 at 584.241 kb on + strand, within MPMX19_03245 at 584.242 kb on - strand, within MPMX19_03245 at 584.242 kb on - strand, within MPMX19_03245 at 584.301 kb on + strand, within MPMX19_03245 at 584.301 kb on + strand, within MPMX19_03245 at 584.301 kb on + strand, within MPMX19_03245 at 584.301 kb on + strand, within MPMX19_03245 at 584.301 kb on + strand, within MPMX19_03245 at 584.301 kb on + strand, within MPMX19_03245 at 584.302 kb on - strand, within MPMX19_03245 at 584.302 kb on - strand, within MPMX19_03245 at 584.302 kb on - strand, within MPMX19_03245 at 584.302 kb on - strand, within MPMX19_03245 at 584.302 kb on - strand, within MPMX19_03245 at 584.302 kb on - strand, within MPMX19_03245 at 584.302 kb on - strand, within MPMX19_03245 at 584.302 kb on - strand, within MPMX19_03245 at 584.598 kb on + strand, within MPMX19_03245 at 584.598 kb on + strand, within MPMX19_03245 at 584.635 kb on + strand, within MPMX19_03245 at 584.635 kb on + strand, within MPMX19_03245 at 584.688 kb on + strand, within MPMX19_03245 at 584.688 kb on + strand, within MPMX19_03245 at 584.688 kb on + strand, within MPMX19_03245 at 584.688 kb on + strand, within MPMX19_03245 at 584.688 kb on + strand, within MPMX19_03245 at 584.688 kb on + strand, within MPMX19_03245 at 584.688 kb on + strand, within MPMX19_03245 at 584.688 kb on + strand, within MPMX19_03245 at 584.688 kb on + strand, within MPMX19_03245 at 584.688 kb on + strand, within MPMX19_03245 at 584.688 kb on + strand, within MPMX19_03245 at 584.689 kb on - strand, within MPMX19_03245 at 584.689 kb on - strand, within MPMX19_03245 at 584.689 kb on - strand, within MPMX19_03245 at 584.689 kb on - strand, within MPMX19_03245 at 584.689 kb on - strand, within MPMX19_03245 at 584.689 kb on - strand, within MPMX19_03245 at 584.689 kb on - strand, within MPMX19_03245 at 584.689 kb on - strand, within MPMX19_03245 at 584.697 kb on + strand, within MPMX19_03245 at 584.697 kb on + strand, within MPMX19_03245 at 584.698 kb on - strand, within MPMX19_03245 at 584.698 kb on - strand, within MPMX19_03245 at 584.698 kb on - strand, within MPMX19_03245 at 584.698 kb on - strand, within MPMX19_03245 at 584.698 kb on - strand, within MPMX19_03245 at 584.698 kb on - strand, within MPMX19_03245 at 584.838 kb on + strand, within MPMX19_03245 at 584.839 kb on - strand, within MPMX19_03245 at 584.878 kb on + strand, within MPMX19_03245 at 584.878 kb on + strand, within MPMX19_03245 at 584.878 kb on + strand, within MPMX19_03245 at 584.879 kb on - strand, within MPMX19_03245 at 584.879 kb on - strand, within MPMX19_03245 at 584.879 kb on - strand, within MPMX19_03245 at 584.879 kb on - strand, within MPMX19_03245 at 584.879 kb on - strand, within MPMX19_03245 at 584.886 kb on + strand, within MPMX19_03245 at 584.886 kb on + strand, within MPMX19_03245 at 584.887 kb on - strand, within MPMX19_03245 at 584.887 kb on - strand, within MPMX19_03245 at 584.887 kb on - strand, within MPMX19_03245 at 584.887 kb on - strand, within MPMX19_03245 at 585.016 kb on + strand at 585.016 kb on + strand at 585.016 kb on + strand at 585.017 kb on - strand at 585.017 kb on - strand at 585.053 kb on - strand at 585.088 kb on + strand at 585.088 kb on + strand at 585.088 kb on + strand at 585.088 kb on + strand at 585.089 kb on - strand at 585.089 kb on - strand at 585.089 kb on - strand at 585.167 kb on - strand at 585.193 kb on + strand at 585.193 kb on + strand at 585.193 kb on + strand at 585.193 kb on + strand at 585.193 kb on + strand at 585.193 kb on + strand at 585.193 kb on + strand at 585.194 kb on - strand at 585.194 kb on - strand at 585.194 kb on - strand at 585.194 kb on - strand at 585.194 kb on - strand at 585.194 kb on - strand at 585.194 kb on - strand at 585.194 kb on - strand at 585.194 kb on - strand at 585.194 kb on - strand at 585.194 kb on - strand at 585.226 kb on + strand at 585.226 kb on + strand at 585.226 kb on + strand at 585.226 kb on + strand at 585.226 kb on + strand at 585.227 kb on - strand at 585.227 kb on - strand at 585.227 kb on - strand at 585.227 kb on - strand at 585.227 kb on - strand at 585.227 kb on - strand at 585.227 kb on - strand at 585.241 kb on + strand, within MPMX19_03246 at 585.241 kb on + strand, within MPMX19_03246 at 585.241 kb on + strand, within MPMX19_03246 at 585.241 kb on + strand, within MPMX19_03246 at 585.241 kb on + strand, within MPMX19_03246 at 585.242 kb on - strand, within MPMX19_03246 at 585.242 kb on - strand, within MPMX19_03246 at 585.242 kb on - strand, within MPMX19_03246 at 585.242 kb on - strand, within MPMX19_03246 at 585.290 kb on + strand, within MPMX19_03246 at 585.290 kb on + strand, within MPMX19_03246 at 585.291 kb on - strand, within MPMX19_03246 at 585.291 kb on - strand, within MPMX19_03246 at 585.403 kb on + strand, within MPMX19_03246 at 585.403 kb on + strand, within MPMX19_03246 at 585.403 kb on + strand, within MPMX19_03246 at 585.403 kb on + strand, within MPMX19_03246 at 585.403 kb on + strand, within MPMX19_03246 at 585.403 kb on + strand, within MPMX19_03246 at 585.403 kb on + strand, within MPMX19_03246 at 585.403 kb on + strand, within MPMX19_03246 at 585.404 kb on - strand, within MPMX19_03246 at 585.404 kb on - strand, within MPMX19_03246 at 585.404 kb on - strand, within MPMX19_03246 at 585.404 kb on - strand, within MPMX19_03246 at 585.404 kb on - strand, within MPMX19_03246 at 585.404 kb on - strand, within MPMX19_03246 at 585.404 kb on - strand, within MPMX19_03246 at 585.404 kb on - strand, within MPMX19_03246 at 585.404 kb on - strand, within MPMX19_03246 at 585.404 kb on - strand, within MPMX19_03246 at 585.404 kb on - strand, within MPMX19_03246 at 585.404 kb on - strand, within MPMX19_03246 at 585.404 kb on - strand, within MPMX19_03246 at 585.404 kb on - strand, within MPMX19_03246 at 585.409 kb on + strand, within MPMX19_03246 at 585.409 kb on + strand, within MPMX19_03246 at 585.409 kb on + strand, within MPMX19_03246 at 585.409 kb on + strand, within MPMX19_03246 at 585.409 kb on + strand, within MPMX19_03246 at 585.410 kb on - strand, within MPMX19_03246 at 585.410 kb on - strand, within MPMX19_03246 at 585.410 kb on - strand, within MPMX19_03246 at 585.410 kb on - strand, within MPMX19_03246 at 585.410 kb on - strand, within MPMX19_03246 at 585.410 kb on - strand, within MPMX19_03246 at 585.499 kb on + strand, within MPMX19_03246 at 585.499 kb on + strand, within MPMX19_03246 at 585.499 kb on + strand, within MPMX19_03246 at 585.694 kb on + strand, within MPMX19_03246 at 585.694 kb on + strand, within MPMX19_03246 at 585.694 kb on + strand, within MPMX19_03246 at 585.694 kb on + strand, within MPMX19_03246 at 585.694 kb on + strand, within MPMX19_03246 at 585.695 kb on - strand, within MPMX19_03246 at 585.722 kb on - strand, within MPMX19_03246 at 585.734 kb on + strand, within MPMX19_03246 at 585.735 kb on - strand, within MPMX19_03246 at 585.877 kb on + strand, within MPMX19_03246 at 585.877 kb on + strand, within MPMX19_03246 at 585.877 kb on + strand, within MPMX19_03246 at 585.877 kb on + strand, within MPMX19_03246 at 585.877 kb on + strand, within MPMX19_03246 at 585.877 kb on + strand, within MPMX19_03246 at 585.878 kb on - strand, within MPMX19_03246 at 585.878 kb on - strand, within MPMX19_03246 at 585.878 kb on - strand, within MPMX19_03246 at 585.937 kb on + strand, within MPMX19_03246 at 585.937 kb on + strand, within MPMX19_03246 at 585.937 kb on + strand, within MPMX19_03246 at 585.937 kb on + strand, within MPMX19_03246 at 585.937 kb on + strand, within MPMX19_03246 at 585.938 kb on - strand, within MPMX19_03246 at 585.938 kb on - strand, within MPMX19_03246 at 585.949 kb on + strand, within MPMX19_03246 at 585.949 kb on + strand, within MPMX19_03246
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 583,200 - -0.2 583,200 - -0.4 583,200 - -1.2 583,313 + +0.6 583,313 + -0.3 583,314 - -0.3 583,314 - -1.6 583,314 - -0.5 583,314 - +0.0 583,314 - +0.2 583,314 - -0.0 583,314 - +0.1 583,314 - -0.6 583,314 - +0.2 583,352 + -1.2 583,352 + -0.1 583,352 + -0.5 583,352 + +0.0 583,352 + +0.6 583,352 + -1.6 583,352 + -2.3 583,353 - -1.2 583,353 - -0.4 583,353 - +0.5 583,353 - -1.8 583,353 - -0.7 583,353 - +0.6 583,353 - +0.8 583,353 - -0.5 583,353 - +0.0 583,353 - -1.3 583,974 + -0.5 583,974 + -0.2 583,974 + +0.8 584,016 + +0.3 584,016 + -0.9 584,016 + -1.7 584,241 + MPMX19_03245 0.22 -0.1 584,241 + MPMX19_03245 0.22 -0.1 584,242 - MPMX19_03245 0.22 -1.2 584,242 - MPMX19_03245 0.22 +0.5 584,301 + MPMX19_03245 0.28 -2.6 584,301 + MPMX19_03245 0.28 -1.7 584,301 + MPMX19_03245 0.28 -1.4 584,301 + MPMX19_03245 0.28 -1.5 584,301 + MPMX19_03245 0.28 -0.7 584,301 + MPMX19_03245 0.28 -0.6 584,302 - MPMX19_03245 0.28 +0.2 584,302 - MPMX19_03245 0.28 +0.4 584,302 - MPMX19_03245 0.28 -1.4 584,302 - MPMX19_03245 0.28 -1.4 584,302 - MPMX19_03245 0.28 +0.9 584,302 - MPMX19_03245 0.28 -0.7 584,302 - MPMX19_03245 0.28 -0.9 584,302 - MPMX19_03245 0.28 -0.6 584,598 + MPMX19_03245 0.59 -0.3 584,598 + MPMX19_03245 0.59 -0.7 584,635 + MPMX19_03245 0.63 +0.0 584,635 + MPMX19_03245 0.63 +1.6 584,688 + MPMX19_03245 0.68 +0.4 584,688 + MPMX19_03245 0.68 -2.5 584,688 + MPMX19_03245 0.68 +0.6 584,688 + MPMX19_03245 0.68 -0.4 584,688 + MPMX19_03245 0.68 -1.0 584,688 + MPMX19_03245 0.68 +0.6 584,688 + MPMX19_03245 0.68 +0.6 584,688 + MPMX19_03245 0.68 -1.7 584,688 + MPMX19_03245 0.68 +0.4 584,688 + MPMX19_03245 0.68 +0.6 584,688 + MPMX19_03245 0.68 -0.4 584,689 - MPMX19_03245 0.68 +1.8 584,689 - MPMX19_03245 0.68 -0.2 584,689 - MPMX19_03245 0.68 -2.2 584,689 - MPMX19_03245 0.68 -1.1 584,689 - MPMX19_03245 0.68 -1.2 584,689 - MPMX19_03245 0.68 +0.4 584,689 - MPMX19_03245 0.68 -0.3 584,689 - MPMX19_03245 0.68 -1.1 584,697 + MPMX19_03245 0.69 +0.0 584,697 + MPMX19_03245 0.69 -1.3 584,698 - MPMX19_03245 0.69 -0.8 584,698 - MPMX19_03245 0.69 -0.3 584,698 - MPMX19_03245 0.69 +0.0 584,698 - MPMX19_03245 0.69 -1.0 584,698 - MPMX19_03245 0.69 -0.8 584,698 - MPMX19_03245 0.69 +0.4 584,838 + MPMX19_03245 0.83 -0.2 584,839 - MPMX19_03245 0.83 -0.3 584,878 + MPMX19_03245 0.87 +0.4 584,878 + MPMX19_03245 0.87 +1.2 584,878 + MPMX19_03245 0.87 -0.1 584,879 - MPMX19_03245 0.88 -2.6 584,879 - MPMX19_03245 0.88 -1.7 584,879 - MPMX19_03245 0.88 -0.8 584,879 - MPMX19_03245 0.88 -0.8 584,879 - MPMX19_03245 0.88 -0.5 584,886 + MPMX19_03245 0.88 +0.6 584,886 + MPMX19_03245 0.88 -1.4 584,887 - MPMX19_03245 0.88 -1.7 584,887 - MPMX19_03245 0.88 +0.0 584,887 - MPMX19_03245 0.88 -2.3 584,887 - MPMX19_03245 0.88 -0.6 585,016 + +0.3 585,016 + +0.2 585,016 + +1.4 585,017 - -0.6 585,017 - +0.4 585,053 - -1.1 585,088 + -0.3 585,088 + -0.3 585,088 + +0.6 585,088 + -0.7 585,089 - -2.4 585,089 - -0.4 585,089 - +0.7 585,167 - -0.7 585,193 + -0.5 585,193 + +0.0 585,193 + -1.7 585,193 + +1.6 585,193 + +0.3 585,193 + -1.6 585,193 + +0.8 585,194 - +1.3 585,194 - -2.4 585,194 - -0.2 585,194 - -0.7 585,194 - -1.0 585,194 - -1.3 585,194 - +0.0 585,194 - -0.8 585,194 - -0.7 585,194 - -1.6 585,194 - +0.0 585,226 + -2.5 585,226 + +0.6 585,226 + -0.6 585,226 + -1.3 585,226 + -0.5 585,227 - +1.8 585,227 - -1.6 585,227 - +0.4 585,227 - -0.8 585,227 - -0.8 585,227 - +0.3 585,227 - -1.3 585,241 + MPMX19_03246 0.10 -0.5 585,241 + MPMX19_03246 0.10 +0.5 585,241 + MPMX19_03246 0.10 +0.1 585,241 + MPMX19_03246 0.10 +0.4 585,241 + MPMX19_03246 0.10 +0.2 585,242 - MPMX19_03246 0.10 +0.3 585,242 - MPMX19_03246 0.10 -0.7 585,242 - MPMX19_03246 0.10 -1.8 585,242 - MPMX19_03246 0.10 -1.7 585,290 + MPMX19_03246 0.12 -0.5 585,290 + MPMX19_03246 0.12 -1.2 585,291 - MPMX19_03246 0.12 -1.0 585,291 - MPMX19_03246 0.12 +0.6 585,403 + MPMX19_03246 0.17 +0.2 585,403 + MPMX19_03246 0.17 -1.3 585,403 + MPMX19_03246 0.17 -0.1 585,403 + MPMX19_03246 0.17 +0.6 585,403 + MPMX19_03246 0.17 +0.0 585,403 + MPMX19_03246 0.17 -1.6 585,403 + MPMX19_03246 0.17 +0.3 585,403 + MPMX19_03246 0.17 -0.1 585,404 - MPMX19_03246 0.17 -0.7 585,404 - MPMX19_03246 0.17 +0.0 585,404 - MPMX19_03246 0.17 -0.0 585,404 - MPMX19_03246 0.17 -1.2 585,404 - MPMX19_03246 0.17 +0.5 585,404 - MPMX19_03246 0.17 +0.6 585,404 - MPMX19_03246 0.17 +0.8 585,404 - MPMX19_03246 0.17 -0.0 585,404 - MPMX19_03246 0.17 -0.4 585,404 - MPMX19_03246 0.17 -0.5 585,404 - MPMX19_03246 0.17 -0.5 585,404 - MPMX19_03246 0.17 +0.7 585,404 - MPMX19_03246 0.17 +1.0 585,404 - MPMX19_03246 0.17 -0.1 585,409 + MPMX19_03246 0.17 -0.7 585,409 + MPMX19_03246 0.17 -0.4 585,409 + MPMX19_03246 0.17 +0.9 585,409 + MPMX19_03246 0.17 +0.6 585,409 + MPMX19_03246 0.17 +0.2 585,410 - MPMX19_03246 0.18 -1.1 585,410 - MPMX19_03246 0.18 -0.5 585,410 - MPMX19_03246 0.18 -1.2 585,410 - MPMX19_03246 0.18 -1.0 585,410 - MPMX19_03246 0.18 -1.6 585,410 - MPMX19_03246 0.18 +0.4 585,499 + MPMX19_03246 0.21 -0.8 585,499 + MPMX19_03246 0.21 -0.2 585,499 + MPMX19_03246 0.21 +0.3 585,694 + MPMX19_03246 0.30 -0.5 585,694 + MPMX19_03246 0.30 -0.5 585,694 + MPMX19_03246 0.30 -0.0 585,694 + MPMX19_03246 0.30 +0.1 585,694 + MPMX19_03246 0.30 +1.6 585,695 - MPMX19_03246 0.30 +0.4 585,722 - MPMX19_03246 0.31 +0.2 585,734 + MPMX19_03246 0.32 -0.2 585,735 - MPMX19_03246 0.32 +0.4 585,877 + MPMX19_03246 0.38 +0.5 585,877 + MPMX19_03246 0.38 +0.8 585,877 + MPMX19_03246 0.38 -0.0 585,877 + MPMX19_03246 0.38 -0.7 585,877 + MPMX19_03246 0.38 -0.4 585,877 + MPMX19_03246 0.38 -0.4 585,878 - MPMX19_03246 0.38 +0.2 585,878 - MPMX19_03246 0.38 -0.6 585,878 - MPMX19_03246 0.38 -1.3 585,937 + MPMX19_03246 0.40 +0.0 585,937 + MPMX19_03246 0.40 -1.4 585,937 + MPMX19_03246 0.40 -1.0 585,937 + MPMX19_03246 0.40 +0.3 585,937 + MPMX19_03246 0.40 +0.5 585,938 - MPMX19_03246 0.40 -0.8 585,938 - MPMX19_03246 0.40 -1.8 585,949 + MPMX19_03246 0.41 +0.4 585,949 + MPMX19_03246 0.41 +1.2
Or see this region's nucleotide sequence