Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_03127 and MPMX19_03128 are separated by 59 nucleotides MPMX19_03128 and MPMX19_03129 are separated by 357 nucleotides
MPMX19_03127: MPMX19_03127 - 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase, at 414,430 to 415,404
_03127
MPMX19_03128: MPMX19_03128 - hypothetical protein, at 415,464 to 416,042
_03128
MPMX19_03129: MPMX19_03129 - Citrate/malate transporter, at 416,400 to 417,761
_03129
Position (kb) 415
416
417 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 414.979 kb on + strand, within MPMX19_03127 at 415.234 kb on + strand, within MPMX19_03127 at 415.234 kb on + strand, within MPMX19_03127 at 415.234 kb on + strand, within MPMX19_03127 at 415.235 kb on - strand, within MPMX19_03127 at 415.235 kb on - strand, within MPMX19_03127 at 415.235 kb on - strand, within MPMX19_03127 at 415.235 kb on - strand, within MPMX19_03127 at 415.533 kb on + strand, within MPMX19_03128 at 415.533 kb on + strand, within MPMX19_03128 at 415.533 kb on + strand, within MPMX19_03128 at 415.533 kb on + strand, within MPMX19_03128 at 415.533 kb on + strand, within MPMX19_03128 at 415.533 kb on + strand, within MPMX19_03128 at 415.533 kb on + strand, within MPMX19_03128 at 415.533 kb on + strand, within MPMX19_03128 at 415.533 kb on + strand, within MPMX19_03128 at 415.533 kb on + strand, within MPMX19_03128 at 415.534 kb on - strand, within MPMX19_03128 at 415.534 kb on - strand, within MPMX19_03128 at 415.534 kb on - strand, within MPMX19_03128 at 416.013 kb on - strand at 416.122 kb on + strand at 416.123 kb on - strand at 416.149 kb on + strand at 416.150 kb on - strand at 416.194 kb on + strand at 416.724 kb on + strand, within MPMX19_03129 at 416.724 kb on + strand, within MPMX19_03129 at 416.724 kb on + strand, within MPMX19_03129 at 416.724 kb on + strand, within MPMX19_03129 at 416.724 kb on + strand, within MPMX19_03129 at 416.724 kb on + strand, within MPMX19_03129 at 416.724 kb on + strand, within MPMX19_03129 at 416.724 kb on + strand, within MPMX19_03129 at 416.725 kb on - strand, within MPMX19_03129 at 416.725 kb on - strand, within MPMX19_03129 at 416.725 kb on - strand, within MPMX19_03129 at 416.725 kb on - strand, within MPMX19_03129 at 416.725 kb on - strand, within MPMX19_03129 at 416.725 kb on - strand, within MPMX19_03129 at 416.725 kb on - strand, within MPMX19_03129 at 416.725 kb on - strand, within MPMX19_03129 at 416.725 kb on - strand, within MPMX19_03129 at 416.725 kb on - strand, within MPMX19_03129 at 416.725 kb on - strand, within MPMX19_03129 at 416.727 kb on + strand, within MPMX19_03129 at 416.727 kb on + strand, within MPMX19_03129 at 416.727 kb on + strand, within MPMX19_03129 at 416.728 kb on - strand, within MPMX19_03129 at 416.728 kb on - strand, within MPMX19_03129 at 416.728 kb on - strand, within MPMX19_03129 at 416.793 kb on + strand, within MPMX19_03129 at 416.793 kb on + strand, within MPMX19_03129 at 416.793 kb on + strand, within MPMX19_03129 at 417.030 kb on + strand, within MPMX19_03129 at 417.030 kb on + strand, within MPMX19_03129
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 414,979 + MPMX19_03127 0.56 -0.9 415,234 + MPMX19_03127 0.82 -0.4 415,234 + MPMX19_03127 0.82 -0.2 415,234 + MPMX19_03127 0.82 -0.4 415,235 - MPMX19_03127 0.83 -1.4 415,235 - MPMX19_03127 0.83 -0.8 415,235 - MPMX19_03127 0.83 -1.1 415,235 - MPMX19_03127 0.83 -0.2 415,533 + MPMX19_03128 0.12 -0.4 415,533 + MPMX19_03128 0.12 -1.2 415,533 + MPMX19_03128 0.12 -0.2 415,533 + MPMX19_03128 0.12 +1.0 415,533 + MPMX19_03128 0.12 -0.5 415,533 + MPMX19_03128 0.12 +0.9 415,533 + MPMX19_03128 0.12 -0.3 415,533 + MPMX19_03128 0.12 +0.5 415,533 + MPMX19_03128 0.12 -1.3 415,533 + MPMX19_03128 0.12 -0.2 415,534 - MPMX19_03128 0.12 +0.2 415,534 - MPMX19_03128 0.12 -1.8 415,534 - MPMX19_03128 0.12 -0.8 416,013 - +0.5 416,122 + -0.6 416,123 - +0.1 416,149 + -1.2 416,150 - -0.7 416,194 + -0.4 416,724 + MPMX19_03129 0.24 +0.2 416,724 + MPMX19_03129 0.24 -1.4 416,724 + MPMX19_03129 0.24 -2.2 416,724 + MPMX19_03129 0.24 -0.2 416,724 + MPMX19_03129 0.24 +0.1 416,724 + MPMX19_03129 0.24 +0.8 416,724 + MPMX19_03129 0.24 -0.4 416,724 + MPMX19_03129 0.24 +0.2 416,725 - MPMX19_03129 0.24 -0.9 416,725 - MPMX19_03129 0.24 -0.9 416,725 - MPMX19_03129 0.24 -0.0 416,725 - MPMX19_03129 0.24 +0.9 416,725 - MPMX19_03129 0.24 -0.4 416,725 - MPMX19_03129 0.24 -0.2 416,725 - MPMX19_03129 0.24 -0.8 416,725 - MPMX19_03129 0.24 -0.3 416,725 - MPMX19_03129 0.24 +0.4 416,725 - MPMX19_03129 0.24 -1.5 416,725 - MPMX19_03129 0.24 +1.6 416,727 + MPMX19_03129 0.24 -0.0 416,727 + MPMX19_03129 0.24 -0.2 416,727 + MPMX19_03129 0.24 +0.6 416,728 - MPMX19_03129 0.24 -3.8 416,728 - MPMX19_03129 0.24 +0.5 416,728 - MPMX19_03129 0.24 -0.5 416,793 + MPMX19_03129 0.29 -1.5 416,793 + MPMX19_03129 0.29 -2.9 416,793 + MPMX19_03129 0.29 +1.2 417,030 + MPMX19_03129 0.46 +0.6 417,030 + MPMX19_03129 0.46 -0.2
Or see this region's nucleotide sequence