Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_03125 and MPMX19_03126 are separated by 20 nucleotides MPMX19_03126 and MPMX19_03127 overlap by 20 nucleotides MPMX19_03127 and MPMX19_03128 are separated by 59 nucleotides MPMX19_03128 and MPMX19_03129 are separated by 357 nucleotides
MPMX19_03125: MPMX19_03125 - Citrate lyase alpha chain, at 412,405 to 413,907
_03125
MPMX19_03126: MPMX19_03126 - Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase, at 413,928 to 414,449
_03126
MPMX19_03127: MPMX19_03127 - 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase, at 414,430 to 415,404
_03127
MPMX19_03128: MPMX19_03128 - hypothetical protein, at 415,464 to 416,042
_03128
MPMX19_03129: MPMX19_03129 - Citrate/malate transporter, at 416,400 to 417,761
_03129
Position (kb) 414
415
416 Strain fitness (log2 ratio) -2
-1
0
1 at 413.452 kb on + strand, within MPMX19_03125 at 413.452 kb on + strand, within MPMX19_03125 at 413.452 kb on + strand, within MPMX19_03125 at 413.452 kb on + strand, within MPMX19_03125 at 413.453 kb on - strand, within MPMX19_03125 at 413.453 kb on - strand, within MPMX19_03125 at 413.453 kb on - strand, within MPMX19_03125 at 413.939 kb on - strand at 414.189 kb on + strand, within MPMX19_03126 at 414.189 kb on + strand, within MPMX19_03126 at 414.189 kb on + strand, within MPMX19_03126 at 414.189 kb on + strand, within MPMX19_03126 at 414.189 kb on + strand, within MPMX19_03126 at 414.190 kb on - strand, within MPMX19_03126 at 414.190 kb on - strand, within MPMX19_03126 at 414.190 kb on - strand, within MPMX19_03126 at 414.190 kb on - strand, within MPMX19_03126 at 414.190 kb on - strand, within MPMX19_03126 at 414.435 kb on + strand at 414.436 kb on - strand at 414.436 kb on - strand at 414.979 kb on + strand, within MPMX19_03127 at 415.234 kb on + strand, within MPMX19_03127 at 415.234 kb on + strand, within MPMX19_03127 at 415.234 kb on + strand, within MPMX19_03127 at 415.235 kb on - strand, within MPMX19_03127 at 415.235 kb on - strand, within MPMX19_03127 at 415.235 kb on - strand, within MPMX19_03127 at 415.235 kb on - strand, within MPMX19_03127 at 415.533 kb on + strand, within MPMX19_03128 at 415.533 kb on + strand, within MPMX19_03128 at 415.533 kb on + strand, within MPMX19_03128 at 415.533 kb on + strand, within MPMX19_03128 at 415.533 kb on + strand, within MPMX19_03128 at 415.533 kb on + strand, within MPMX19_03128 at 415.533 kb on + strand, within MPMX19_03128 at 415.533 kb on + strand, within MPMX19_03128 at 415.533 kb on + strand, within MPMX19_03128 at 415.533 kb on + strand, within MPMX19_03128 at 415.534 kb on - strand, within MPMX19_03128 at 415.534 kb on - strand, within MPMX19_03128 at 415.534 kb on - strand, within MPMX19_03128 at 416.013 kb on - strand at 416.122 kb on + strand at 416.123 kb on - strand at 416.149 kb on + strand at 416.150 kb on - strand at 416.194 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 413,452 + MPMX19_03125 0.70 +0.5 413,452 + MPMX19_03125 0.70 -0.5 413,452 + MPMX19_03125 0.70 +0.1 413,452 + MPMX19_03125 0.70 -1.2 413,453 - MPMX19_03125 0.70 -1.4 413,453 - MPMX19_03125 0.70 +0.8 413,453 - MPMX19_03125 0.70 -0.4 413,939 - +0.1 414,189 + MPMX19_03126 0.50 -0.9 414,189 + MPMX19_03126 0.50 -0.5 414,189 + MPMX19_03126 0.50 -1.1 414,189 + MPMX19_03126 0.50 -1.7 414,189 + MPMX19_03126 0.50 -0.4 414,190 - MPMX19_03126 0.50 +0.1 414,190 - MPMX19_03126 0.50 -0.1 414,190 - MPMX19_03126 0.50 +0.1 414,190 - MPMX19_03126 0.50 -0.4 414,190 - MPMX19_03126 0.50 -0.9 414,435 + +0.5 414,436 - +0.4 414,436 - -0.3 414,979 + MPMX19_03127 0.56 -0.9 415,234 + MPMX19_03127 0.82 -0.4 415,234 + MPMX19_03127 0.82 -0.2 415,234 + MPMX19_03127 0.82 -0.4 415,235 - MPMX19_03127 0.83 -1.4 415,235 - MPMX19_03127 0.83 -0.8 415,235 - MPMX19_03127 0.83 -1.1 415,235 - MPMX19_03127 0.83 -0.2 415,533 + MPMX19_03128 0.12 -0.4 415,533 + MPMX19_03128 0.12 -1.2 415,533 + MPMX19_03128 0.12 -0.2 415,533 + MPMX19_03128 0.12 +1.0 415,533 + MPMX19_03128 0.12 -0.5 415,533 + MPMX19_03128 0.12 +0.9 415,533 + MPMX19_03128 0.12 -0.3 415,533 + MPMX19_03128 0.12 +0.5 415,533 + MPMX19_03128 0.12 -1.3 415,533 + MPMX19_03128 0.12 -0.2 415,534 - MPMX19_03128 0.12 +0.2 415,534 - MPMX19_03128 0.12 -1.8 415,534 - MPMX19_03128 0.12 -0.8 416,013 - +0.5 416,122 + -0.6 416,123 - +0.1 416,149 + -1.2 416,150 - -0.7 416,194 + -0.4
Or see this region's nucleotide sequence