Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_02873 and MPMX19_02874 are separated by 17 nucleotides MPMX19_02874 and MPMX19_02875 are separated by 264 nucleotides MPMX19_02875 and MPMX19_02876 are separated by 209 nucleotides
MPMX19_02873: MPMX19_02873 - Acetyl esterase, at 123,257 to 124,261
_02873
MPMX19_02874: MPMX19_02874 - HTH-type transcriptional regulator SutR, at 124,279 to 124,875
_02874
MPMX19_02875: MPMX19_02875 - hypothetical protein, at 125,140 to 125,502
_02875
MPMX19_02876: MPMX19_02876 - hypothetical protein, at 125,712 to 126,806
_02876
Position (kb)
124
125 Strain fitness (log2 ratio)
-2
-1
0
1 at 123.549 kb on + strand, within MPMX19_02873 at 123.549 kb on + strand, within MPMX19_02873 at 123.549 kb on + strand, within MPMX19_02873 at 123.549 kb on + strand, within MPMX19_02873 at 123.549 kb on + strand, within MPMX19_02873 at 123.549 kb on + strand, within MPMX19_02873 at 123.549 kb on + strand, within MPMX19_02873 at 123.550 kb on - strand, within MPMX19_02873 at 123.550 kb on - strand, within MPMX19_02873 at 123.550 kb on - strand, within MPMX19_02873 at 123.550 kb on - strand, within MPMX19_02873 at 123.550 kb on - strand, within MPMX19_02873 at 123.550 kb on - strand, within MPMX19_02873 at 123.562 kb on - strand, within MPMX19_02873 at 123.651 kb on + strand, within MPMX19_02873 at 123.652 kb on - strand, within MPMX19_02873 at 123.862 kb on - strand, within MPMX19_02873 at 123.963 kb on + strand, within MPMX19_02873 at 123.963 kb on + strand, within MPMX19_02873 at 123.963 kb on + strand, within MPMX19_02873 at 123.963 kb on + strand, within MPMX19_02873 at 123.963 kb on + strand, within MPMX19_02873 at 123.964 kb on - strand, within MPMX19_02873 at 123.964 kb on - strand, within MPMX19_02873 at 123.964 kb on - strand, within MPMX19_02873 at 123.964 kb on - strand, within MPMX19_02873 at 124.116 kb on + strand, within MPMX19_02873 at 124.116 kb on + strand, within MPMX19_02873 at 124.116 kb on + strand, within MPMX19_02873 at 124.117 kb on - strand, within MPMX19_02873 at 124.117 kb on - strand, within MPMX19_02873 at 124.117 kb on - strand, within MPMX19_02873 at 124.289 kb on + strand at 124.289 kb on + strand at 124.289 kb on + strand at 124.289 kb on + strand at 124.289 kb on + strand at 124.290 kb on - strand at 124.290 kb on - strand at 124.290 kb on - strand at 124.290 kb on - strand at 124.290 kb on - strand at 124.290 kb on - strand at 124.290 kb on - strand at 124.290 kb on - strand at 124.304 kb on + strand at 124.304 kb on + strand at 124.305 kb on - strand at 124.305 kb on - strand at 124.305 kb on - strand at 124.305 kb on - strand at 124.305 kb on - strand at 124.305 kb on - strand at 124.305 kb on - strand at 124.305 kb on - strand at 124.305 kb on - strand at 124.305 kb on - strand at 124.305 kb on - strand at 124.305 kb on - strand at 124.305 kb on - strand at 124.495 kb on + strand, within MPMX19_02874 at 124.508 kb on + strand, within MPMX19_02874 at 124.508 kb on + strand, within MPMX19_02874 at 124.508 kb on + strand, within MPMX19_02874 at 124.508 kb on + strand, within MPMX19_02874 at 124.508 kb on + strand, within MPMX19_02874 at 124.509 kb on - strand, within MPMX19_02874 at 124.509 kb on - strand, within MPMX19_02874 at 124.509 kb on - strand, within MPMX19_02874 at 124.509 kb on - strand, within MPMX19_02874 at 125.065 kb on + strand at 125.065 kb on + strand at 125.065 kb on + strand at 125.336 kb on + strand, within MPMX19_02875 at 125.336 kb on + strand, within MPMX19_02875 at 125.336 kb on + strand, within MPMX19_02875 at 125.336 kb on + strand, within MPMX19_02875 at 125.337 kb on - strand, within MPMX19_02875 at 125.337 kb on - strand, within MPMX19_02875 at 125.337 kb on - strand, within MPMX19_02875 at 125.337 kb on - strand, within MPMX19_02875 at 125.409 kb on - strand, within MPMX19_02875 at 125.520 kb on + strand at 125.520 kb on + strand at 125.520 kb on + strand at 125.647 kb on + strand at 125.647 kb on + strand at 125.648 kb on - strand at 125.648 kb on - strand at 125.648 kb on - strand at 125.682 kb on + strand at 125.682 kb on + strand at 125.682 kb on + strand at 125.682 kb on + strand at 125.682 kb on + strand at 125.683 kb on - strand at 125.683 kb on - strand at 125.683 kb on - strand at 125.683 kb on - strand at 125.754 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 123,549 + MPMX19_02873 0.29 +0.2 123,549 + MPMX19_02873 0.29 -1.9 123,549 + MPMX19_02873 0.29 -0.9 123,549 + MPMX19_02873 0.29 +0.4 123,549 + MPMX19_02873 0.29 -0.9 123,549 + MPMX19_02873 0.29 -0.3 123,549 + MPMX19_02873 0.29 +0.8 123,550 - MPMX19_02873 0.29 -1.5 123,550 - MPMX19_02873 0.29 -0.8 123,550 - MPMX19_02873 0.29 -0.0 123,550 - MPMX19_02873 0.29 -0.4 123,550 - MPMX19_02873 0.29 +0.2 123,550 - MPMX19_02873 0.29 +0.5 123,562 - MPMX19_02873 0.30 -0.7 123,651 + MPMX19_02873 0.39 +1.4 123,652 - MPMX19_02873 0.39 -0.7 123,862 - MPMX19_02873 0.60 -0.5 123,963 + MPMX19_02873 0.70 -0.1 123,963 + MPMX19_02873 0.70 +0.8 123,963 + MPMX19_02873 0.70 +0.8 123,963 + MPMX19_02873 0.70 +0.2 123,963 + MPMX19_02873 0.70 -0.0 123,964 - MPMX19_02873 0.70 -0.2 123,964 - MPMX19_02873 0.70 +0.4 123,964 - MPMX19_02873 0.70 -1.7 123,964 - MPMX19_02873 0.70 +0.5 124,116 + MPMX19_02873 0.85 -1.3 124,116 + MPMX19_02873 0.85 +0.3 124,116 + MPMX19_02873 0.85 -0.3 124,117 - MPMX19_02873 0.86 -0.3 124,117 - MPMX19_02873 0.86 +0.1 124,117 - MPMX19_02873 0.86 +0.1 124,289 + +0.8 124,289 + -1.7 124,289 + -0.3 124,289 + -0.0 124,289 + -1.7 124,290 - +1.2 124,290 - -0.3 124,290 - -0.5 124,290 - -0.6 124,290 - -1.5 124,290 - -0.1 124,290 - -1.0 124,290 - -0.8 124,304 + -0.3 124,304 + -0.1 124,305 - +1.2 124,305 - -0.3 124,305 - -0.9 124,305 - +0.4 124,305 - -0.2 124,305 - -0.4 124,305 - -0.1 124,305 - +0.3 124,305 - +0.2 124,305 - -0.1 124,305 - -0.1 124,305 - -0.6 124,305 - -1.0 124,495 + MPMX19_02874 0.36 +1.1 124,508 + MPMX19_02874 0.38 +0.3 124,508 + MPMX19_02874 0.38 -0.0 124,508 + MPMX19_02874 0.38 +0.4 124,508 + MPMX19_02874 0.38 +1.7 124,508 + MPMX19_02874 0.38 -2.1 124,509 - MPMX19_02874 0.39 -0.7 124,509 - MPMX19_02874 0.39 +0.5 124,509 - MPMX19_02874 0.39 +0.5 124,509 - MPMX19_02874 0.39 +0.1 125,065 + -0.1 125,065 + -1.2 125,065 + -1.2 125,336 + MPMX19_02875 0.54 -0.8 125,336 + MPMX19_02875 0.54 +0.7 125,336 + MPMX19_02875 0.54 +0.3 125,336 + MPMX19_02875 0.54 -1.2 125,337 - MPMX19_02875 0.54 +0.4 125,337 - MPMX19_02875 0.54 +0.1 125,337 - MPMX19_02875 0.54 -1.7 125,337 - MPMX19_02875 0.54 -0.2 125,409 - MPMX19_02875 0.74 -0.3 125,520 + +0.3 125,520 + +0.1 125,520 + -0.5 125,647 + +0.1 125,647 + -0.5 125,648 - -0.4 125,648 - +0.5 125,648 - +0.2 125,682 + -1.2 125,682 + +0.0 125,682 + +0.4 125,682 + +0.1 125,682 + -0.9 125,683 - -0.2 125,683 - -0.3 125,683 - -1.7 125,683 - -0.1 125,754 - -0.2
Or see this region's nucleotide sequence