Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_02811 and MPMX19_02812 are separated by 45 nucleotides MPMX19_02812 and MPMX19_02813 are separated by 101 nucleotides
MPMX19_02811: MPMX19_02811 - Long-chain-alcohol dehydrogenase 1, at 47,091 to 48,227
_02811
MPMX19_02812: MPMX19_02812 - 4-hydroxy-tetrahydrodipicolinate synthase, at 48,273 to 49,172
_02812
MPMX19_02813: MPMX19_02813 - hypothetical protein, at 49,274 to 50,689
_02813
Position (kb)
48
49
50 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 47.694 kb on + strand, within MPMX19_02811 at 47.694 kb on + strand, within MPMX19_02811 at 47.695 kb on - strand, within MPMX19_02811 at 47.695 kb on - strand, within MPMX19_02811 at 47.730 kb on + strand, within MPMX19_02811 at 47.731 kb on - strand, within MPMX19_02811 at 47.731 kb on - strand, within MPMX19_02811 at 47.731 kb on - strand, within MPMX19_02811 at 47.731 kb on - strand, within MPMX19_02811 at 47.833 kb on - strand, within MPMX19_02811 at 48.210 kb on + strand at 48.210 kb on + strand at 48.210 kb on + strand at 48.211 kb on - strand at 48.211 kb on - strand at 48.211 kb on - strand at 48.211 kb on - strand at 48.643 kb on - strand, within MPMX19_02812 at 48.678 kb on + strand, within MPMX19_02812 at 48.679 kb on - strand, within MPMX19_02812 at 48.679 kb on - strand, within MPMX19_02812 at 48.684 kb on + strand, within MPMX19_02812 at 48.684 kb on + strand, within MPMX19_02812 at 48.684 kb on + strand, within MPMX19_02812 at 48.684 kb on + strand, within MPMX19_02812 at 48.684 kb on + strand, within MPMX19_02812 at 48.684 kb on + strand, within MPMX19_02812 at 48.684 kb on + strand, within MPMX19_02812 at 48.684 kb on + strand, within MPMX19_02812 at 48.684 kb on + strand, within MPMX19_02812 at 48.685 kb on - strand, within MPMX19_02812 at 48.685 kb on - strand, within MPMX19_02812 at 48.685 kb on - strand, within MPMX19_02812 at 48.685 kb on - strand, within MPMX19_02812 at 48.685 kb on - strand, within MPMX19_02812 at 48.685 kb on - strand, within MPMX19_02812 at 48.685 kb on - strand, within MPMX19_02812 at 49.023 kb on + strand, within MPMX19_02812 at 49.023 kb on + strand, within MPMX19_02812 at 49.023 kb on + strand, within MPMX19_02812 at 49.024 kb on - strand, within MPMX19_02812 at 49.024 kb on - strand, within MPMX19_02812 at 49.024 kb on - strand, within MPMX19_02812 at 49.024 kb on - strand, within MPMX19_02812 at 49.155 kb on + strand at 49.155 kb on + strand at 49.156 kb on - strand at 49.156 kb on - strand at 49.328 kb on + strand at 49.328 kb on + strand at 49.328 kb on + strand at 49.328 kb on + strand at 49.328 kb on + strand at 49.328 kb on + strand at 49.328 kb on + strand at 49.328 kb on + strand at 49.329 kb on - strand at 49.329 kb on - strand at 49.329 kb on - strand at 49.329 kb on - strand at 49.329 kb on - strand at 49.329 kb on - strand at 49.329 kb on - strand at 49.329 kb on - strand at 49.329 kb on - strand at 49.574 kb on + strand, within MPMX19_02813 at 49.574 kb on + strand, within MPMX19_02813 at 49.574 kb on + strand, within MPMX19_02813 at 49.574 kb on + strand, within MPMX19_02813 at 49.575 kb on - strand, within MPMX19_02813 at 49.575 kb on - strand, within MPMX19_02813 at 49.575 kb on - strand, within MPMX19_02813 at 49.589 kb on + strand, within MPMX19_02813 at 49.589 kb on + strand, within MPMX19_02813 at 49.589 kb on + strand, within MPMX19_02813 at 49.590 kb on - strand, within MPMX19_02813 at 49.616 kb on + strand, within MPMX19_02813 at 49.616 kb on + strand, within MPMX19_02813 at 49.620 kb on - strand, within MPMX19_02813 at 49.661 kb on + strand, within MPMX19_02813 at 49.661 kb on + strand, within MPMX19_02813 at 49.661 kb on + strand, within MPMX19_02813 at 49.661 kb on + strand, within MPMX19_02813 at 49.661 kb on + strand, within MPMX19_02813 at 49.661 kb on + strand, within MPMX19_02813 at 49.661 kb on + strand, within MPMX19_02813 at 49.661 kb on + strand, within MPMX19_02813 at 49.661 kb on + strand, within MPMX19_02813 at 49.662 kb on - strand, within MPMX19_02813 at 49.662 kb on - strand, within MPMX19_02813 at 49.662 kb on - strand, within MPMX19_02813 at 49.662 kb on - strand, within MPMX19_02813 at 49.662 kb on - strand, within MPMX19_02813 at 49.662 kb on - strand, within MPMX19_02813 at 49.662 kb on - strand, within MPMX19_02813 at 49.691 kb on + strand, within MPMX19_02813 at 49.691 kb on + strand, within MPMX19_02813 at 49.691 kb on + strand, within MPMX19_02813 at 49.691 kb on + strand, within MPMX19_02813 at 49.691 kb on + strand, within MPMX19_02813 at 49.691 kb on + strand, within MPMX19_02813 at 49.691 kb on + strand, within MPMX19_02813 at 49.692 kb on - strand, within MPMX19_02813 at 49.692 kb on - strand, within MPMX19_02813 at 49.692 kb on - strand, within MPMX19_02813 at 49.692 kb on - strand, within MPMX19_02813 at 49.692 kb on - strand, within MPMX19_02813 at 49.692 kb on - strand, within MPMX19_02813 at 49.692 kb on - strand, within MPMX19_02813 at 49.692 kb on - strand, within MPMX19_02813 at 49.692 kb on - strand, within MPMX19_02813 at 49.692 kb on - strand, within MPMX19_02813 at 49.778 kb on + strand, within MPMX19_02813 at 49.778 kb on + strand, within MPMX19_02813 at 49.778 kb on + strand, within MPMX19_02813 at 49.778 kb on + strand, within MPMX19_02813 at 49.778 kb on + strand, within MPMX19_02813 at 49.778 kb on + strand, within MPMX19_02813 at 49.778 kb on + strand, within MPMX19_02813 at 49.778 kb on + strand, within MPMX19_02813 at 49.778 kb on + strand, within MPMX19_02813 at 49.778 kb on + strand, within MPMX19_02813 at 49.778 kb on + strand, within MPMX19_02813 at 49.779 kb on - strand, within MPMX19_02813 at 49.779 kb on - strand, within MPMX19_02813 at 49.779 kb on - strand, within MPMX19_02813 at 49.779 kb on - strand, within MPMX19_02813 at 49.779 kb on - strand, within MPMX19_02813 at 49.779 kb on - strand, within MPMX19_02813 at 49.779 kb on - strand, within MPMX19_02813 at 49.779 kb on - strand, within MPMX19_02813 at 49.781 kb on + strand, within MPMX19_02813 at 49.781 kb on + strand, within MPMX19_02813 at 49.781 kb on + strand, within MPMX19_02813 at 49.781 kb on + strand, within MPMX19_02813 at 49.781 kb on + strand, within MPMX19_02813 at 49.781 kb on + strand, within MPMX19_02813 at 49.781 kb on + strand, within MPMX19_02813 at 49.781 kb on + strand, within MPMX19_02813 at 49.781 kb on + strand, within MPMX19_02813 at 49.781 kb on + strand, within MPMX19_02813 at 49.781 kb on + strand, within MPMX19_02813 at 49.781 kb on + strand, within MPMX19_02813 at 49.782 kb on - strand, within MPMX19_02813 at 49.782 kb on - strand, within MPMX19_02813 at 49.782 kb on - strand, within MPMX19_02813 at 49.782 kb on - strand, within MPMX19_02813 at 49.782 kb on - strand, within MPMX19_02813 at 49.782 kb on - strand, within MPMX19_02813 at 49.782 kb on - strand, within MPMX19_02813 at 49.782 kb on - strand, within MPMX19_02813 at 49.782 kb on - strand, within MPMX19_02813 at 49.782 kb on - strand, within MPMX19_02813 at 49.811 kb on + strand, within MPMX19_02813 at 49.811 kb on + strand, within MPMX19_02813 at 49.811 kb on + strand, within MPMX19_02813 at 49.811 kb on + strand, within MPMX19_02813 at 49.811 kb on + strand, within MPMX19_02813 at 49.812 kb on - strand, within MPMX19_02813 at 49.812 kb on - strand, within MPMX19_02813 at 49.925 kb on + strand, within MPMX19_02813 at 49.925 kb on + strand, within MPMX19_02813 at 49.925 kb on + strand, within MPMX19_02813 at 49.925 kb on + strand, within MPMX19_02813 at 49.925 kb on + strand, within MPMX19_02813 at 49.926 kb on - strand, within MPMX19_02813 at 50.069 kb on + strand, within MPMX19_02813 at 50.069 kb on + strand, within MPMX19_02813 at 50.069 kb on + strand, within MPMX19_02813 at 50.069 kb on + strand, within MPMX19_02813 at 50.069 kb on + strand, within MPMX19_02813 at 50.069 kb on + strand, within MPMX19_02813 at 50.069 kb on + strand, within MPMX19_02813 at 50.069 kb on + strand, within MPMX19_02813 at 50.069 kb on + strand, within MPMX19_02813 at 50.069 kb on + strand, within MPMX19_02813 at 50.070 kb on - strand, within MPMX19_02813 at 50.070 kb on - strand, within MPMX19_02813 at 50.070 kb on - strand, within MPMX19_02813 at 50.070 kb on - strand, within MPMX19_02813 at 50.070 kb on - strand, within MPMX19_02813 at 50.132 kb on + strand, within MPMX19_02813 at 50.132 kb on + strand, within MPMX19_02813 at 50.132 kb on + strand, within MPMX19_02813 at 50.132 kb on + strand, within MPMX19_02813 at 50.132 kb on + strand, within MPMX19_02813 at 50.133 kb on - strand, within MPMX19_02813 at 50.133 kb on - strand, within MPMX19_02813 at 50.133 kb on - strand, within MPMX19_02813 at 50.133 kb on - strand, within MPMX19_02813 at 50.133 kb on - strand, within MPMX19_02813 at 50.133 kb on - strand, within MPMX19_02813 at 50.159 kb on + strand, within MPMX19_02813
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 47,694 + MPMX19_02811 0.53 +0.1 47,694 + MPMX19_02811 0.53 -0.9 47,695 - MPMX19_02811 0.53 -1.0 47,695 - MPMX19_02811 0.53 -1.7 47,730 + MPMX19_02811 0.56 -0.4 47,731 - MPMX19_02811 0.56 -0.1 47,731 - MPMX19_02811 0.56 +0.7 47,731 - MPMX19_02811 0.56 -1.7 47,731 - MPMX19_02811 0.56 -0.7 47,833 - MPMX19_02811 0.65 +0.3 48,210 + +1.2 48,210 + +0.8 48,210 + -0.9 48,211 - -0.2 48,211 - +0.5 48,211 - -1.7 48,211 - -0.3 48,643 - MPMX19_02812 0.41 -0.1 48,678 + MPMX19_02812 0.45 -0.2 48,679 - MPMX19_02812 0.45 -1.3 48,679 - MPMX19_02812 0.45 -1.2 48,684 + MPMX19_02812 0.46 -1.7 48,684 + MPMX19_02812 0.46 -1.3 48,684 + MPMX19_02812 0.46 +1.4 48,684 + MPMX19_02812 0.46 -0.3 48,684 + MPMX19_02812 0.46 -1.5 48,684 + MPMX19_02812 0.46 -1.3 48,684 + MPMX19_02812 0.46 -2.3 48,684 + MPMX19_02812 0.46 -0.3 48,684 + MPMX19_02812 0.46 -0.3 48,685 - MPMX19_02812 0.46 -0.8 48,685 - MPMX19_02812 0.46 +0.3 48,685 - MPMX19_02812 0.46 -1.3 48,685 - MPMX19_02812 0.46 -1.7 48,685 - MPMX19_02812 0.46 -0.5 48,685 - MPMX19_02812 0.46 -1.5 48,685 - MPMX19_02812 0.46 +0.1 49,023 + MPMX19_02812 0.83 -1.6 49,023 + MPMX19_02812 0.83 -1.2 49,023 + MPMX19_02812 0.83 -0.4 49,024 - MPMX19_02812 0.83 +0.2 49,024 - MPMX19_02812 0.83 -1.2 49,024 - MPMX19_02812 0.83 +0.4 49,024 - MPMX19_02812 0.83 -0.7 49,155 + -0.6 49,155 + -2.2 49,156 - -1.0 49,156 - +1.7 49,328 + -1.2 49,328 + -0.6 49,328 + -0.3 49,328 + +0.2 49,328 + -0.3 49,328 + -0.7 49,328 + +0.2 49,328 + -1.8 49,329 - -0.9 49,329 - -0.2 49,329 - -1.0 49,329 - -0.3 49,329 - +0.7 49,329 - +0.6 49,329 - -0.7 49,329 - -0.1 49,329 - -2.5 49,574 + MPMX19_02813 0.21 -0.2 49,574 + MPMX19_02813 0.21 +0.2 49,574 + MPMX19_02813 0.21 -1.7 49,574 + MPMX19_02813 0.21 +0.7 49,575 - MPMX19_02813 0.21 -1.7 49,575 - MPMX19_02813 0.21 -1.5 49,575 - MPMX19_02813 0.21 +0.9 49,589 + MPMX19_02813 0.22 -0.2 49,589 + MPMX19_02813 0.22 -0.8 49,589 + MPMX19_02813 0.22 -0.9 49,590 - MPMX19_02813 0.22 +0.3 49,616 + MPMX19_02813 0.24 -0.9 49,616 + MPMX19_02813 0.24 -0.3 49,620 - MPMX19_02813 0.24 -0.3 49,661 + MPMX19_02813 0.27 +0.3 49,661 + MPMX19_02813 0.27 -1.8 49,661 + MPMX19_02813 0.27 +0.9 49,661 + MPMX19_02813 0.27 +0.2 49,661 + MPMX19_02813 0.27 +0.2 49,661 + MPMX19_02813 0.27 -0.3 49,661 + MPMX19_02813 0.27 +0.1 49,661 + MPMX19_02813 0.27 -0.0 49,661 + MPMX19_02813 0.27 -2.0 49,662 - MPMX19_02813 0.27 -0.3 49,662 - MPMX19_02813 0.27 -0.2 49,662 - MPMX19_02813 0.27 -0.9 49,662 - MPMX19_02813 0.27 -0.5 49,662 - MPMX19_02813 0.27 -1.3 49,662 - MPMX19_02813 0.27 +1.0 49,662 - MPMX19_02813 0.27 -1.5 49,691 + MPMX19_02813 0.29 +0.3 49,691 + MPMX19_02813 0.29 +0.5 49,691 + MPMX19_02813 0.29 +0.2 49,691 + MPMX19_02813 0.29 -0.9 49,691 + MPMX19_02813 0.29 +0.5 49,691 + MPMX19_02813 0.29 -1.0 49,691 + MPMX19_02813 0.29 -0.2 49,692 - MPMX19_02813 0.30 -1.7 49,692 - MPMX19_02813 0.30 -0.4 49,692 - MPMX19_02813 0.30 -1.9 49,692 - MPMX19_02813 0.30 -0.9 49,692 - MPMX19_02813 0.30 +0.5 49,692 - MPMX19_02813 0.30 +0.2 49,692 - MPMX19_02813 0.30 +0.7 49,692 - MPMX19_02813 0.30 -0.6 49,692 - MPMX19_02813 0.30 +1.5 49,692 - MPMX19_02813 0.30 -0.8 49,778 + MPMX19_02813 0.36 +0.5 49,778 + MPMX19_02813 0.36 -0.8 49,778 + MPMX19_02813 0.36 -2.4 49,778 + MPMX19_02813 0.36 +2.1 49,778 + MPMX19_02813 0.36 -1.5 49,778 + MPMX19_02813 0.36 -1.3 49,778 + MPMX19_02813 0.36 -0.7 49,778 + MPMX19_02813 0.36 -0.9 49,778 + MPMX19_02813 0.36 -1.4 49,778 + MPMX19_02813 0.36 -1.2 49,778 + MPMX19_02813 0.36 -0.6 49,779 - MPMX19_02813 0.36 +0.4 49,779 - MPMX19_02813 0.36 -0.0 49,779 - MPMX19_02813 0.36 -0.7 49,779 - MPMX19_02813 0.36 -1.3 49,779 - MPMX19_02813 0.36 -1.5 49,779 - MPMX19_02813 0.36 -0.7 49,779 - MPMX19_02813 0.36 -0.3 49,779 - MPMX19_02813 0.36 -0.9 49,781 + MPMX19_02813 0.36 -0.1 49,781 + MPMX19_02813 0.36 -1.1 49,781 + MPMX19_02813 0.36 -0.9 49,781 + MPMX19_02813 0.36 -1.0 49,781 + MPMX19_02813 0.36 -1.8 49,781 + MPMX19_02813 0.36 +0.1 49,781 + MPMX19_02813 0.36 +1.0 49,781 + MPMX19_02813 0.36 -0.3 49,781 + MPMX19_02813 0.36 -0.5 49,781 + MPMX19_02813 0.36 -1.7 49,781 + MPMX19_02813 0.36 +0.2 49,781 + MPMX19_02813 0.36 +1.1 49,782 - MPMX19_02813 0.36 +0.5 49,782 - MPMX19_02813 0.36 -2.4 49,782 - MPMX19_02813 0.36 -1.3 49,782 - MPMX19_02813 0.36 +0.5 49,782 - MPMX19_02813 0.36 -0.3 49,782 - MPMX19_02813 0.36 -0.3 49,782 - MPMX19_02813 0.36 -0.4 49,782 - MPMX19_02813 0.36 -2.0 49,782 - MPMX19_02813 0.36 -0.3 49,782 - MPMX19_02813 0.36 -0.6 49,811 + MPMX19_02813 0.38 -0.2 49,811 + MPMX19_02813 0.38 +0.9 49,811 + MPMX19_02813 0.38 +0.1 49,811 + MPMX19_02813 0.38 +1.2 49,811 + MPMX19_02813 0.38 +0.7 49,812 - MPMX19_02813 0.38 +1.7 49,812 - MPMX19_02813 0.38 +0.1 49,925 + MPMX19_02813 0.46 +0.1 49,925 + MPMX19_02813 0.46 -0.3 49,925 + MPMX19_02813 0.46 +0.1 49,925 + MPMX19_02813 0.46 -0.1 49,925 + MPMX19_02813 0.46 +0.3 49,926 - MPMX19_02813 0.46 -0.1 50,069 + MPMX19_02813 0.56 -0.3 50,069 + MPMX19_02813 0.56 -0.8 50,069 + MPMX19_02813 0.56 -0.8 50,069 + MPMX19_02813 0.56 +1.7 50,069 + MPMX19_02813 0.56 +0.5 50,069 + MPMX19_02813 0.56 -0.1 50,069 + MPMX19_02813 0.56 +0.3 50,069 + MPMX19_02813 0.56 -1.9 50,069 + MPMX19_02813 0.56 -0.2 50,069 + MPMX19_02813 0.56 -0.7 50,070 - MPMX19_02813 0.56 -0.9 50,070 - MPMX19_02813 0.56 -0.8 50,070 - MPMX19_02813 0.56 -0.9 50,070 - MPMX19_02813 0.56 +0.8 50,070 - MPMX19_02813 0.56 +0.8 50,132 + MPMX19_02813 0.61 +1.7 50,132 + MPMX19_02813 0.61 -1.9 50,132 + MPMX19_02813 0.61 +0.1 50,132 + MPMX19_02813 0.61 +1.2 50,132 + MPMX19_02813 0.61 -0.3 50,133 - MPMX19_02813 0.61 -0.4 50,133 - MPMX19_02813 0.61 -0.7 50,133 - MPMX19_02813 0.61 +0.1 50,133 - MPMX19_02813 0.61 -0.2 50,133 - MPMX19_02813 0.61 -0.6 50,133 - MPMX19_02813 0.61 -0.7 50,159 + MPMX19_02813 0.62 -1.2
Or see this region's nucleotide sequence