Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02757

Experiment: NF

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX19_02755 and MPMX19_02756 are separated by 36 nucleotidesMPMX19_02756 and MPMX19_02757 overlap by 4 nucleotidesMPMX19_02757 and MPMX19_02758 are separated by 21 nucleotides MPMX19_02755: MPMX19_02755 - Periplasmic dipeptide transport protein, at 2,899,160 to 2,900,653 _02755 MPMX19_02756: MPMX19_02756 - Glutathione transport system permease protein GsiC, at 2,900,690 to 2,901,640 _02756 MPMX19_02757: MPMX19_02757 - Glutathione transport system permease protein GsiD, at 2,901,637 to 2,902,464 _02757 MPMX19_02758: MPMX19_02758 - hypothetical protein, at 2,902,486 to 2,904,138 _02758 Position (kb) 2901 2902 2903Strain fitness (log2 ratio) -2 -1 0 1 2 3at 2900.651 kb on + strandat 2900.652 kb on - strandat 2900.652 kb on - strandat 2900.652 kb on - strandat 2900.652 kb on - strandat 2900.665 kb on + strandat 2900.665 kb on + strandat 2900.665 kb on + strandat 2900.665 kb on + strandat 2900.665 kb on + strandat 2900.665 kb on + strandat 2900.665 kb on + strandat 2900.665 kb on + strandat 2900.665 kb on + strandat 2900.666 kb on - strandat 2900.666 kb on - strandat 2900.666 kb on - strandat 2900.666 kb on - strandat 2900.666 kb on - strandat 2900.666 kb on - strandat 2900.666 kb on - strandat 2900.675 kb on + strandat 2900.675 kb on + strandat 2900.675 kb on + strandat 2900.675 kb on + strandat 2900.675 kb on + strandat 2900.675 kb on + strandat 2900.675 kb on + strandat 2900.676 kb on - strandat 2900.676 kb on - strandat 2900.676 kb on - strandat 2900.676 kb on - strandat 2900.676 kb on - strandat 2900.676 kb on - strandat 2900.676 kb on - strandat 2900.676 kb on - strandat 2900.676 kb on - strandat 2900.681 kb on + strandat 2900.681 kb on + strandat 2900.682 kb on - strandat 2900.682 kb on - strandat 2900.682 kb on - strandat 2900.682 kb on - strandat 2900.936 kb on + strand, within MPMX19_02756at 2900.936 kb on + strand, within MPMX19_02756at 2900.936 kb on + strand, within MPMX19_02756at 2900.936 kb on + strand, within MPMX19_02756at 2900.936 kb on + strand, within MPMX19_02756at 2900.936 kb on + strand, within MPMX19_02756at 2900.936 kb on + strand, within MPMX19_02756at 2900.936 kb on + strand, within MPMX19_02756at 2900.936 kb on + strand, within MPMX19_02756at 2900.936 kb on + strand, within MPMX19_02756at 2900.936 kb on + strand, within MPMX19_02756at 2900.936 kb on + strand, within MPMX19_02756at 2900.937 kb on - strand, within MPMX19_02756at 2900.937 kb on - strand, within MPMX19_02756at 2900.937 kb on - strand, within MPMX19_02756at 2900.937 kb on - strand, within MPMX19_02756at 2900.937 kb on - strand, within MPMX19_02756at 2900.937 kb on - strand, within MPMX19_02756at 2900.937 kb on - strand, within MPMX19_02756at 2900.937 kb on - strand, within MPMX19_02756at 2900.937 kb on - strand, within MPMX19_02756at 2900.937 kb on - strand, within MPMX19_02756at 2900.937 kb on - strand, within MPMX19_02756at 2900.937 kb on - strand, within MPMX19_02756at 2900.937 kb on - strand, within MPMX19_02756at 2900.937 kb on - strand, within MPMX19_02756at 2900.937 kb on - strand, within MPMX19_02756at 2900.937 kb on - strand, within MPMX19_02756at 2900.937 kb on - strand, within MPMX19_02756at 2901.325 kb on + strand, within MPMX19_02756at 2901.325 kb on + strand, within MPMX19_02756at 2901.326 kb on - strand, within MPMX19_02756at 2901.326 kb on - strand, within MPMX19_02756at 2901.500 kb on + strand, within MPMX19_02756at 2901.501 kb on - strand, within MPMX19_02756at 2901.501 kb on - strand, within MPMX19_02756at 2901.501 kb on - strand, within MPMX19_02756at 2901.501 kb on - strand, within MPMX19_02756at 2901.501 kb on - strand, within MPMX19_02756at 2901.730 kb on + strand, within MPMX19_02757at 2901.731 kb on - strand, within MPMX19_02757at 2902.264 kb on + strand, within MPMX19_02757at 2902.264 kb on + strand, within MPMX19_02757at 2902.264 kb on + strand, within MPMX19_02757at 2902.264 kb on + strand, within MPMX19_02757at 2902.264 kb on + strand, within MPMX19_02757at 2902.264 kb on + strand, within MPMX19_02757at 2902.264 kb on + strand, within MPMX19_02757at 2902.264 kb on + strand, within MPMX19_02757at 2902.265 kb on - strand, within MPMX19_02757at 2902.265 kb on - strand, within MPMX19_02757at 2902.265 kb on - strand, within MPMX19_02757at 2902.265 kb on - strand, within MPMX19_02757at 2902.551 kb on - strandat 2902.847 kb on + strand, within MPMX19_02758at 2902.847 kb on + strand, within MPMX19_02758at 2902.847 kb on + strand, within MPMX19_02758at 2902.847 kb on + strand, within MPMX19_02758at 2902.847 kb on + strand, within MPMX19_02758at 2902.847 kb on + strand, within MPMX19_02758at 2902.847 kb on + strand, within MPMX19_02758at 2902.847 kb on + strand, within MPMX19_02758at 2902.847 kb on + strand, within MPMX19_02758at 2902.847 kb on + strand, within MPMX19_02758at 2902.847 kb on + strand, within MPMX19_02758at 2902.847 kb on + strand, within MPMX19_02758at 2902.847 kb on + strand, within MPMX19_02758at 2902.847 kb on + strand, within MPMX19_02758at 2902.847 kb on + strand, within MPMX19_02758at 2902.847 kb on + strand, within MPMX19_02758at 2902.847 kb on + strand, within MPMX19_02758at 2902.847 kb on + strand, within MPMX19_02758at 2902.847 kb on + strand, within MPMX19_02758at 2902.847 kb on + strand, within MPMX19_02758at 2902.847 kb on + strand, within MPMX19_02758at 2902.847 kb on + strand, within MPMX19_02758at 2902.847 kb on + strand, within MPMX19_02758at 2902.847 kb on + strand, within MPMX19_02758at 2902.847 kb on + strand, within MPMX19_02758at 2902.848 kb on - strand, within MPMX19_02758at 2902.848 kb on - strand, within MPMX19_02758at 2902.848 kb on - strand, within MPMX19_02758at 2902.848 kb on - strand, within MPMX19_02758at 2902.848 kb on - strand, within MPMX19_02758at 2902.848 kb on - strand, within MPMX19_02758at 2902.848 kb on - strand, within MPMX19_02758at 2902.848 kb on - strand, within MPMX19_02758at 2902.848 kb on - strand, within MPMX19_02758at 2902.848 kb on - strand, within MPMX19_02758at 2902.848 kb on - strand, within MPMX19_02758at 2902.848 kb on - strand, within MPMX19_02758at 2902.848 kb on - strand, within MPMX19_02758at 2902.848 kb on - strand, within MPMX19_02758at 2902.848 kb on - strand, within MPMX19_02758at 2902.848 kb on - strand, within MPMX19_02758at 2902.848 kb on - strand, within MPMX19_02758at 2902.848 kb on - strand, within MPMX19_02758at 2903.292 kb on + strand, within MPMX19_02758at 2903.292 kb on + strand, within MPMX19_02758at 2903.293 kb on - strand, within MPMX19_02758at 2903.294 kb on + strand, within MPMX19_02758at 2903.294 kb on + strand, within MPMX19_02758at 2903.294 kb on + strand, within MPMX19_02758at 2903.294 kb on + strand, within MPMX19_02758at 2903.294 kb on + strand, within MPMX19_02758at 2903.294 kb on + strand, within MPMX19_02758at 2903.294 kb on + strand, within MPMX19_02758at 2903.294 kb on + strand, within MPMX19_02758at 2903.294 kb on + strand, within MPMX19_02758at 2903.294 kb on + strand, within MPMX19_02758at 2903.294 kb on + strand, within MPMX19_02758at 2903.294 kb on + strand, within MPMX19_02758at 2903.294 kb on + strand, within MPMX19_02758at 2903.294 kb on + strand, within MPMX19_02758at 2903.294 kb on + strand, within MPMX19_02758at 2903.294 kb on + strand, within MPMX19_02758at 2903.294 kb on + strand, within MPMX19_02758at 2903.294 kb on + strand, within MPMX19_02758at 2903.294 kb on + strand, within MPMX19_02758at 2903.294 kb on + strand, within MPMX19_02758at 2903.294 kb on + strand, within MPMX19_02758at 2903.294 kb on + strand, within MPMX19_02758at 2903.294 kb on + strand, within MPMX19_02758at 2903.294 kb on + strand, within MPMX19_02758at 2903.294 kb on + strand, within MPMX19_02758at 2903.294 kb on + strand, within MPMX19_02758at 2903.295 kb on - strand, within MPMX19_02758at 2903.295 kb on - strand, within MPMX19_02758at 2903.295 kb on - strand, within MPMX19_02758at 2903.295 kb on - strand, within MPMX19_02758at 2903.295 kb on - strand, within MPMX19_02758at 2903.295 kb on - strand, within MPMX19_02758at 2903.295 kb on - strand, within MPMX19_02758at 2903.295 kb on - strand, within MPMX19_02758at 2903.295 kb on - strand, within MPMX19_02758at 2903.295 kb on - strand, within MPMX19_02758at 2903.295 kb on - strand, within MPMX19_02758at 2903.295 kb on - strand, within MPMX19_02758at 2903.295 kb on - strand, within MPMX19_02758at 2903.295 kb on - strand, within MPMX19_02758at 2903.295 kb on - strand, within MPMX19_02758at 2903.295 kb on - strand, within MPMX19_02758at 2903.295 kb on - strand, within MPMX19_02758at 2903.295 kb on - strand, within MPMX19_02758at 2903.295 kb on - strand, within MPMX19_02758at 2903.295 kb on - strand, within MPMX19_02758at 2903.295 kb on - strand, within MPMX19_02758at 2903.295 kb on - strand, within MPMX19_02758at 2903.312 kb on + strand, within MPMX19_02758at 2903.312 kb on + strand, within MPMX19_02758at 2903.313 kb on - strand, within MPMX19_02758at 2903.313 kb on - strand, within MPMX19_02758at 2903.313 kb on - strand, within MPMX19_02758at 2903.313 kb on - strand, within MPMX19_02758

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Per-strain Table

Position Strand Gene LocusTag Fraction NF
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2,900,651 + -0.5
2,900,652 - -0.1
2,900,652 - +3.4
2,900,652 - -0.4
2,900,652 - +0.2
2,900,665 + -1.0
2,900,665 + +0.9
2,900,665 + -1.9
2,900,665 + -0.7
2,900,665 + -0.2
2,900,665 + -1.4
2,900,665 + -0.1
2,900,665 + -0.7
2,900,665 + +0.9
2,900,666 - +0.1
2,900,666 - -1.1
2,900,666 - +0.1
2,900,666 - -1.6
2,900,666 - -0.1
2,900,666 - -0.7
2,900,666 - -1.3
2,900,675 + +0.6
2,900,675 + -1.3
2,900,675 + -0.7
2,900,675 + +0.1
2,900,675 + +0.1
2,900,675 + -1.3
2,900,675 + +0.7
2,900,676 - -1.5
2,900,676 - +0.0
2,900,676 - -0.5
2,900,676 - -0.7
2,900,676 - -0.1
2,900,676 - -0.7
2,900,676 - -0.9
2,900,676 - -2.2
2,900,676 - -0.8
2,900,681 + -0.6
2,900,681 + -0.6
2,900,682 - -1.3
2,900,682 - +3.2
2,900,682 - -1.6
2,900,682 - -1.7
2,900,936 + MPMX19_02756 0.26 +0.4
2,900,936 + MPMX19_02756 0.26 +0.1
2,900,936 + MPMX19_02756 0.26 -0.1
2,900,936 + MPMX19_02756 0.26 +0.4
2,900,936 + MPMX19_02756 0.26 +1.0
2,900,936 + MPMX19_02756 0.26 +0.3
2,900,936 + MPMX19_02756 0.26 -0.9
2,900,936 + MPMX19_02756 0.26 -1.4
2,900,936 + MPMX19_02756 0.26 +1.9
2,900,936 + MPMX19_02756 0.26 +0.7
2,900,936 + MPMX19_02756 0.26 -0.1
2,900,936 + MPMX19_02756 0.26 -0.6
2,900,937 - MPMX19_02756 0.26 +0.1
2,900,937 - MPMX19_02756 0.26 -0.5
2,900,937 - MPMX19_02756 0.26 -0.0
2,900,937 - MPMX19_02756 0.26 +1.6
2,900,937 - MPMX19_02756 0.26 -0.4
2,900,937 - MPMX19_02756 0.26 +0.7
2,900,937 - MPMX19_02756 0.26 -0.3
2,900,937 - MPMX19_02756 0.26 -0.9
2,900,937 - MPMX19_02756 0.26 -0.1
2,900,937 - MPMX19_02756 0.26 -0.1
2,900,937 - MPMX19_02756 0.26 -0.5
2,900,937 - MPMX19_02756 0.26 -1.9
2,900,937 - MPMX19_02756 0.26 -1.3
2,900,937 - MPMX19_02756 0.26 +0.2
2,900,937 - MPMX19_02756 0.26 -0.7
2,900,937 - MPMX19_02756 0.26 -0.4
2,900,937 - MPMX19_02756 0.26 -0.8
2,901,325 + MPMX19_02756 0.67 -0.5
2,901,325 + MPMX19_02756 0.67 +0.8
2,901,326 - MPMX19_02756 0.67 -0.4
2,901,326 - MPMX19_02756 0.67 +0.3
2,901,500 + MPMX19_02756 0.85 +0.1
2,901,501 - MPMX19_02756 0.85 +0.2
2,901,501 - MPMX19_02756 0.85 -0.1
2,901,501 - MPMX19_02756 0.85 -0.3
2,901,501 - MPMX19_02756 0.85 -2.4
2,901,501 - MPMX19_02756 0.85 +0.4
2,901,730 + MPMX19_02757 0.11 -0.7
2,901,731 - MPMX19_02757 0.11 -0.6
2,902,264 + MPMX19_02757 0.76 -0.7
2,902,264 + MPMX19_02757 0.76 -0.6
2,902,264 + MPMX19_02757 0.76 -0.7
2,902,264 + MPMX19_02757 0.76 -1.0
2,902,264 + MPMX19_02757 0.76 -0.6
2,902,264 + MPMX19_02757 0.76 -2.1
2,902,264 + MPMX19_02757 0.76 -1.5
2,902,264 + MPMX19_02757 0.76 -2.3
2,902,265 - MPMX19_02757 0.76 +0.1
2,902,265 - MPMX19_02757 0.76 -1.3
2,902,265 - MPMX19_02757 0.76 -0.2
2,902,265 - MPMX19_02757 0.76 -0.9
2,902,551 - -1.7
2,902,847 + MPMX19_02758 0.22 -0.4
2,902,847 + MPMX19_02758 0.22 +0.5
2,902,847 + MPMX19_02758 0.22 -0.6
2,902,847 + MPMX19_02758 0.22 +0.5
2,902,847 + MPMX19_02758 0.22 -0.6
2,902,847 + MPMX19_02758 0.22 -1.7
2,902,847 + MPMX19_02758 0.22 +0.2
2,902,847 + MPMX19_02758 0.22 +0.7
2,902,847 + MPMX19_02758 0.22 -0.0
2,902,847 + MPMX19_02758 0.22 -0.5
2,902,847 + MPMX19_02758 0.22 -0.6
2,902,847 + MPMX19_02758 0.22 -0.3
2,902,847 + MPMX19_02758 0.22 +0.9
2,902,847 + MPMX19_02758 0.22 +0.4
2,902,847 + MPMX19_02758 0.22 -0.4
2,902,847 + MPMX19_02758 0.22 +0.9
2,902,847 + MPMX19_02758 0.22 -0.7
2,902,847 + MPMX19_02758 0.22 -1.9
2,902,847 + MPMX19_02758 0.22 +0.6
2,902,847 + MPMX19_02758 0.22 -0.3
2,902,847 + MPMX19_02758 0.22 +1.2
2,902,847 + MPMX19_02758 0.22 -0.3
2,902,847 + MPMX19_02758 0.22 -0.6
2,902,847 + MPMX19_02758 0.22 +0.3
2,902,847 + MPMX19_02758 0.22 -0.8
2,902,848 - MPMX19_02758 0.22 +1.0
2,902,848 - MPMX19_02758 0.22 +1.0
2,902,848 - MPMX19_02758 0.22 -0.9
2,902,848 - MPMX19_02758 0.22 -0.1
2,902,848 - MPMX19_02758 0.22 -0.5
2,902,848 - MPMX19_02758 0.22 -1.1
2,902,848 - MPMX19_02758 0.22 -1.1
2,902,848 - MPMX19_02758 0.22 -0.2
2,902,848 - MPMX19_02758 0.22 -0.7
2,902,848 - MPMX19_02758 0.22 +0.4
2,902,848 - MPMX19_02758 0.22 -0.8
2,902,848 - MPMX19_02758 0.22 -2.4
2,902,848 - MPMX19_02758 0.22 -1.7
2,902,848 - MPMX19_02758 0.22 -0.1
2,902,848 - MPMX19_02758 0.22 -2.0
2,902,848 - MPMX19_02758 0.22 +0.3
2,902,848 - MPMX19_02758 0.22 -0.7
2,902,848 - MPMX19_02758 0.22 +0.9
2,903,292 + MPMX19_02758 0.49 +0.1
2,903,292 + MPMX19_02758 0.49 +0.4
2,903,293 - MPMX19_02758 0.49 -0.4
2,903,294 + MPMX19_02758 0.49 +0.9
2,903,294 + MPMX19_02758 0.49 -1.1
2,903,294 + MPMX19_02758 0.49 -0.2
2,903,294 + MPMX19_02758 0.49 +1.2
2,903,294 + MPMX19_02758 0.49 -0.2
2,903,294 + MPMX19_02758 0.49 +1.2
2,903,294 + MPMX19_02758 0.49 +0.7
2,903,294 + MPMX19_02758 0.49 -1.3
2,903,294 + MPMX19_02758 0.49 -0.0
2,903,294 + MPMX19_02758 0.49 +1.0
2,903,294 + MPMX19_02758 0.49 +0.9
2,903,294 + MPMX19_02758 0.49 +1.9
2,903,294 + MPMX19_02758 0.49 +0.3
2,903,294 + MPMX19_02758 0.49 -0.1
2,903,294 + MPMX19_02758 0.49 -0.4
2,903,294 + MPMX19_02758 0.49 -1.0
2,903,294 + MPMX19_02758 0.49 -0.5
2,903,294 + MPMX19_02758 0.49 -0.8
2,903,294 + MPMX19_02758 0.49 -0.1
2,903,294 + MPMX19_02758 0.49 -1.3
2,903,294 + MPMX19_02758 0.49 +0.7
2,903,294 + MPMX19_02758 0.49 -1.4
2,903,294 + MPMX19_02758 0.49 -0.4
2,903,294 + MPMX19_02758 0.49 -0.9
2,903,294 + MPMX19_02758 0.49 -1.2
2,903,294 + MPMX19_02758 0.49 +0.4
2,903,295 - MPMX19_02758 0.49 -0.8
2,903,295 - MPMX19_02758 0.49 +0.4
2,903,295 - MPMX19_02758 0.49 -0.0
2,903,295 - MPMX19_02758 0.49 +2.3
2,903,295 - MPMX19_02758 0.49 +0.5
2,903,295 - MPMX19_02758 0.49 +1.5
2,903,295 - MPMX19_02758 0.49 -2.4
2,903,295 - MPMX19_02758 0.49 +0.4
2,903,295 - MPMX19_02758 0.49 -0.9
2,903,295 - MPMX19_02758 0.49 -0.9
2,903,295 - MPMX19_02758 0.49 -1.6
2,903,295 - MPMX19_02758 0.49 +0.4
2,903,295 - MPMX19_02758 0.49 -0.1
2,903,295 - MPMX19_02758 0.49 +0.2
2,903,295 - MPMX19_02758 0.49 -0.6
2,903,295 - MPMX19_02758 0.49 -0.9
2,903,295 - MPMX19_02758 0.49 +0.3
2,903,295 - MPMX19_02758 0.49 -0.8
2,903,295 - MPMX19_02758 0.49 -2.0
2,903,295 - MPMX19_02758 0.49 -1.9
2,903,295 - MPMX19_02758 0.49 -0.9
2,903,295 - MPMX19_02758 0.49 +0.3
2,903,312 + MPMX19_02758 0.50 +0.3
2,903,312 + MPMX19_02758 0.50 +0.7
2,903,313 - MPMX19_02758 0.50 +0.3
2,903,313 - MPMX19_02758 0.50 +0.3
2,903,313 - MPMX19_02758 0.50 -1.8
2,903,313 - MPMX19_02758 0.50 +1.0

Or see this region's nucleotide sequence