Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_02746 and MPMX19_02747 are separated by 166 nucleotides MPMX19_02747 and MPMX19_02748 are separated by 187 nucleotides
MPMX19_02746: MPMX19_02746 - Peptidyl-lysine N-acetyltransferase Pat, at 2,889,394 to 2,892,105
_02746
MPMX19_02747: MPMX19_02747 - hypothetical protein, at 2,892,272 to 2,892,742
_02747
MPMX19_02748: MPMX19_02748 - L-lactate dehydrogenase, at 2,892,930 to 2,893,880
_02748
Position (kb)
2892
2893 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2891.324 kb on + strand, within MPMX19_02746 at 2891.324 kb on + strand, within MPMX19_02746 at 2891.324 kb on + strand, within MPMX19_02746 at 2891.324 kb on + strand, within MPMX19_02746 at 2891.324 kb on + strand, within MPMX19_02746 at 2891.324 kb on + strand, within MPMX19_02746 at 2891.324 kb on + strand, within MPMX19_02746 at 2891.324 kb on + strand, within MPMX19_02746 at 2891.324 kb on + strand, within MPMX19_02746 at 2891.325 kb on - strand, within MPMX19_02746 at 2891.325 kb on - strand, within MPMX19_02746 at 2891.325 kb on - strand, within MPMX19_02746 at 2891.325 kb on - strand, within MPMX19_02746 at 2891.325 kb on - strand, within MPMX19_02746 at 2891.325 kb on - strand, within MPMX19_02746 at 2891.478 kb on + strand, within MPMX19_02746 at 2891.478 kb on + strand, within MPMX19_02746 at 2891.478 kb on + strand, within MPMX19_02746 at 2891.479 kb on - strand, within MPMX19_02746 at 2891.480 kb on + strand, within MPMX19_02746 at 2891.480 kb on + strand, within MPMX19_02746 at 2891.480 kb on + strand, within MPMX19_02746 at 2891.480 kb on + strand, within MPMX19_02746 at 2891.481 kb on - strand, within MPMX19_02746 at 2891.481 kb on - strand, within MPMX19_02746 at 2891.481 kb on - strand, within MPMX19_02746 at 2891.481 kb on - strand, within MPMX19_02746 at 2891.519 kb on + strand, within MPMX19_02746 at 2891.519 kb on + strand, within MPMX19_02746 at 2891.519 kb on + strand, within MPMX19_02746 at 2891.520 kb on - strand, within MPMX19_02746 at 2891.520 kb on - strand, within MPMX19_02746 at 2891.750 kb on + strand, within MPMX19_02746 at 2891.927 kb on + strand at 2891.927 kb on + strand at 2891.927 kb on + strand at 2891.927 kb on + strand at 2891.927 kb on + strand at 2891.928 kb on - strand at 2891.928 kb on - strand at 2891.928 kb on - strand at 2891.928 kb on - strand at 2891.928 kb on - strand at 2892.224 kb on + strand at 2892.224 kb on + strand at 2892.224 kb on + strand at 2892.224 kb on + strand at 2892.225 kb on - strand at 2892.225 kb on - strand at 2892.225 kb on - strand at 2892.273 kb on + strand at 2892.273 kb on + strand at 2892.273 kb on + strand at 2892.273 kb on + strand at 2892.273 kb on + strand at 2892.273 kb on + strand at 2892.274 kb on - strand at 2892.274 kb on - strand at 2892.274 kb on - strand at 2892.274 kb on - strand at 2892.274 kb on - strand at 2892.274 kb on - strand at 2892.274 kb on - strand at 2892.339 kb on + strand, within MPMX19_02747 at 2892.339 kb on + strand, within MPMX19_02747 at 2892.339 kb on + strand, within MPMX19_02747 at 2892.339 kb on + strand, within MPMX19_02747 at 2892.339 kb on + strand, within MPMX19_02747 at 2892.339 kb on + strand, within MPMX19_02747 at 2892.340 kb on - strand, within MPMX19_02747 at 2892.340 kb on - strand, within MPMX19_02747 at 2892.340 kb on - strand, within MPMX19_02747 at 2892.340 kb on - strand, within MPMX19_02747 at 2892.340 kb on - strand, within MPMX19_02747 at 2892.340 kb on - strand, within MPMX19_02747 at 2892.340 kb on - strand, within MPMX19_02747 at 2892.340 kb on - strand, within MPMX19_02747 at 2892.340 kb on - strand, within MPMX19_02747 at 2892.340 kb on - strand, within MPMX19_02747 at 2892.340 kb on - strand, within MPMX19_02747 at 2892.363 kb on + strand, within MPMX19_02747 at 2892.364 kb on - strand, within MPMX19_02747 at 2892.364 kb on - strand, within MPMX19_02747 at 2892.396 kb on + strand, within MPMX19_02747 at 2892.396 kb on + strand, within MPMX19_02747 at 2892.396 kb on + strand, within MPMX19_02747 at 2892.396 kb on + strand, within MPMX19_02747 at 2892.396 kb on + strand, within MPMX19_02747 at 2892.397 kb on - strand, within MPMX19_02747 at 2892.397 kb on - strand, within MPMX19_02747 at 2892.397 kb on - strand, within MPMX19_02747 at 2892.397 kb on - strand, within MPMX19_02747 at 2892.594 kb on + strand, within MPMX19_02747 at 2892.594 kb on + strand, within MPMX19_02747 at 2892.594 kb on + strand, within MPMX19_02747 at 2892.594 kb on + strand, within MPMX19_02747 at 2892.594 kb on + strand, within MPMX19_02747 at 2892.594 kb on + strand, within MPMX19_02747 at 2892.594 kb on + strand, within MPMX19_02747 at 2892.594 kb on + strand, within MPMX19_02747 at 2892.594 kb on + strand, within MPMX19_02747 at 2892.594 kb on + strand, within MPMX19_02747 at 2892.594 kb on + strand, within MPMX19_02747 at 2892.594 kb on + strand, within MPMX19_02747 at 2892.594 kb on + strand, within MPMX19_02747 at 2892.595 kb on - strand, within MPMX19_02747 at 2892.595 kb on - strand, within MPMX19_02747 at 2892.595 kb on - strand, within MPMX19_02747 at 2892.595 kb on - strand, within MPMX19_02747 at 2892.595 kb on - strand, within MPMX19_02747 at 2892.595 kb on - strand, within MPMX19_02747 at 2892.595 kb on - strand, within MPMX19_02747 at 2892.595 kb on - strand, within MPMX19_02747 at 2892.595 kb on - strand, within MPMX19_02747 at 2892.595 kb on - strand, within MPMX19_02747 at 2892.595 kb on - strand, within MPMX19_02747 at 2892.765 kb on + strand at 2892.860 kb on + strand at 2892.860 kb on + strand at 2892.860 kb on + strand at 2892.860 kb on + strand at 2892.860 kb on + strand at 2892.860 kb on + strand at 2892.861 kb on - strand at 2892.861 kb on - strand at 2892.875 kb on - strand at 2892.875 kb on - strand at 2892.875 kb on - strand at 2893.113 kb on + strand, within MPMX19_02748 at 2893.113 kb on + strand, within MPMX19_02748 at 2893.113 kb on + strand, within MPMX19_02748 at 2893.113 kb on + strand, within MPMX19_02748 at 2893.113 kb on + strand, within MPMX19_02748 at 2893.113 kb on + strand, within MPMX19_02748 at 2893.113 kb on + strand, within MPMX19_02748 at 2893.113 kb on + strand, within MPMX19_02748 at 2893.113 kb on + strand, within MPMX19_02748 at 2893.113 kb on + strand, within MPMX19_02748 at 2893.113 kb on + strand, within MPMX19_02748 at 2893.114 kb on - strand, within MPMX19_02748 at 2893.114 kb on - strand, within MPMX19_02748 at 2893.114 kb on - strand, within MPMX19_02748 at 2893.114 kb on - strand, within MPMX19_02748 at 2893.114 kb on - strand, within MPMX19_02748 at 2893.114 kb on - strand, within MPMX19_02748 at 2893.114 kb on - strand, within MPMX19_02748 at 2893.114 kb on - strand, within MPMX19_02748 at 2893.582 kb on - strand, within MPMX19_02748 at 2893.582 kb on - strand, within MPMX19_02748
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 2,891,324 + MPMX19_02746 0.71 +1.1 2,891,324 + MPMX19_02746 0.71 -1.1 2,891,324 + MPMX19_02746 0.71 -0.8 2,891,324 + MPMX19_02746 0.71 -0.8 2,891,324 + MPMX19_02746 0.71 -0.7 2,891,324 + MPMX19_02746 0.71 -0.7 2,891,324 + MPMX19_02746 0.71 +1.3 2,891,324 + MPMX19_02746 0.71 -0.7 2,891,324 + MPMX19_02746 0.71 -2.0 2,891,325 - MPMX19_02746 0.71 -2.3 2,891,325 - MPMX19_02746 0.71 +1.2 2,891,325 - MPMX19_02746 0.71 -0.6 2,891,325 - MPMX19_02746 0.71 +0.8 2,891,325 - MPMX19_02746 0.71 -0.9 2,891,325 - MPMX19_02746 0.71 -0.6 2,891,478 + MPMX19_02746 0.77 -1.4 2,891,478 + MPMX19_02746 0.77 -0.6 2,891,478 + MPMX19_02746 0.77 -1.5 2,891,479 - MPMX19_02746 0.77 -1.0 2,891,480 + MPMX19_02746 0.77 -0.3 2,891,480 + MPMX19_02746 0.77 +0.5 2,891,480 + MPMX19_02746 0.77 -0.9 2,891,480 + MPMX19_02746 0.77 -0.8 2,891,481 - MPMX19_02746 0.77 -0.9 2,891,481 - MPMX19_02746 0.77 -1.0 2,891,481 - MPMX19_02746 0.77 -1.0 2,891,481 - MPMX19_02746 0.77 -3.6 2,891,519 + MPMX19_02746 0.78 -0.6 2,891,519 + MPMX19_02746 0.78 -0.9 2,891,519 + MPMX19_02746 0.78 -0.8 2,891,520 - MPMX19_02746 0.78 -0.3 2,891,520 - MPMX19_02746 0.78 -1.3 2,891,750 + MPMX19_02746 0.87 -2.0 2,891,927 + -0.3 2,891,927 + -1.2 2,891,927 + -0.4 2,891,927 + +1.2 2,891,927 + +0.4 2,891,928 - +0.3 2,891,928 - -0.1 2,891,928 - -0.3 2,891,928 - -1.5 2,891,928 - +0.3 2,892,224 + +0.3 2,892,224 + +0.9 2,892,224 + +1.0 2,892,224 + -1.4 2,892,225 - +0.5 2,892,225 - +0.4 2,892,225 - -1.7 2,892,273 + +0.9 2,892,273 + -1.6 2,892,273 + +0.5 2,892,273 + +0.1 2,892,273 + -0.5 2,892,273 + -0.4 2,892,274 - -0.3 2,892,274 - -0.1 2,892,274 - +0.4 2,892,274 - -0.0 2,892,274 - +0.3 2,892,274 - -0.4 2,892,274 - +1.3 2,892,339 + MPMX19_02747 0.14 -0.9 2,892,339 + MPMX19_02747 0.14 +0.6 2,892,339 + MPMX19_02747 0.14 -1.1 2,892,339 + MPMX19_02747 0.14 -0.1 2,892,339 + MPMX19_02747 0.14 +0.5 2,892,339 + MPMX19_02747 0.14 -0.5 2,892,340 - MPMX19_02747 0.14 -0.6 2,892,340 - MPMX19_02747 0.14 +1.6 2,892,340 - MPMX19_02747 0.14 +1.3 2,892,340 - MPMX19_02747 0.14 -0.3 2,892,340 - MPMX19_02747 0.14 -0.3 2,892,340 - MPMX19_02747 0.14 -0.5 2,892,340 - MPMX19_02747 0.14 +1.1 2,892,340 - MPMX19_02747 0.14 -0.3 2,892,340 - MPMX19_02747 0.14 +0.2 2,892,340 - MPMX19_02747 0.14 -1.2 2,892,340 - MPMX19_02747 0.14 -1.5 2,892,363 + MPMX19_02747 0.19 -0.1 2,892,364 - MPMX19_02747 0.20 -0.2 2,892,364 - MPMX19_02747 0.20 +1.1 2,892,396 + MPMX19_02747 0.26 +0.3 2,892,396 + MPMX19_02747 0.26 +0.1 2,892,396 + MPMX19_02747 0.26 +0.2 2,892,396 + MPMX19_02747 0.26 +1.1 2,892,396 + MPMX19_02747 0.26 +0.1 2,892,397 - MPMX19_02747 0.27 -0.6 2,892,397 - MPMX19_02747 0.27 +1.2 2,892,397 - MPMX19_02747 0.27 -0.1 2,892,397 - MPMX19_02747 0.27 -0.5 2,892,594 + MPMX19_02747 0.68 -0.7 2,892,594 + MPMX19_02747 0.68 -1.2 2,892,594 + MPMX19_02747 0.68 +0.9 2,892,594 + MPMX19_02747 0.68 -1.0 2,892,594 + MPMX19_02747 0.68 -0.7 2,892,594 + MPMX19_02747 0.68 +1.5 2,892,594 + MPMX19_02747 0.68 -0.5 2,892,594 + MPMX19_02747 0.68 -0.7 2,892,594 + MPMX19_02747 0.68 -0.4 2,892,594 + MPMX19_02747 0.68 -1.8 2,892,594 + MPMX19_02747 0.68 +1.1 2,892,594 + MPMX19_02747 0.68 +0.3 2,892,594 + MPMX19_02747 0.68 +0.1 2,892,595 - MPMX19_02747 0.69 +0.5 2,892,595 - MPMX19_02747 0.69 +0.6 2,892,595 - MPMX19_02747 0.69 -0.9 2,892,595 - MPMX19_02747 0.69 -0.9 2,892,595 - MPMX19_02747 0.69 +1.5 2,892,595 - MPMX19_02747 0.69 +1.1 2,892,595 - MPMX19_02747 0.69 -1.5 2,892,595 - MPMX19_02747 0.69 +0.3 2,892,595 - MPMX19_02747 0.69 -1.1 2,892,595 - MPMX19_02747 0.69 +0.7 2,892,595 - MPMX19_02747 0.69 -0.5 2,892,765 + -1.9 2,892,860 + -1.0 2,892,860 + +0.5 2,892,860 + -0.8 2,892,860 + +0.0 2,892,860 + +1.6 2,892,860 + +0.1 2,892,861 - +0.3 2,892,861 - +0.5 2,892,875 - +0.4 2,892,875 - -1.5 2,892,875 - -1.3 2,893,113 + MPMX19_02748 0.19 +0.6 2,893,113 + MPMX19_02748 0.19 -0.3 2,893,113 + MPMX19_02748 0.19 -0.3 2,893,113 + MPMX19_02748 0.19 +2.3 2,893,113 + MPMX19_02748 0.19 -0.6 2,893,113 + MPMX19_02748 0.19 -0.4 2,893,113 + MPMX19_02748 0.19 +0.3 2,893,113 + MPMX19_02748 0.19 +0.9 2,893,113 + MPMX19_02748 0.19 -0.4 2,893,113 + MPMX19_02748 0.19 -0.9 2,893,113 + MPMX19_02748 0.19 -2.3 2,893,114 - MPMX19_02748 0.19 -0.4 2,893,114 - MPMX19_02748 0.19 -0.1 2,893,114 - MPMX19_02748 0.19 +0.9 2,893,114 - MPMX19_02748 0.19 -0.6 2,893,114 - MPMX19_02748 0.19 -0.0 2,893,114 - MPMX19_02748 0.19 -1.0 2,893,114 - MPMX19_02748 0.19 +0.1 2,893,114 - MPMX19_02748 0.19 -2.0 2,893,582 - MPMX19_02748 0.69 -0.1 2,893,582 - MPMX19_02748 0.69 -0.5
Or see this region's nucleotide sequence