Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_02742 and MPMX19_02743 are separated by 1 nucleotides MPMX19_02743 and MPMX19_02744 overlap by 4 nucleotides MPMX19_02744 and MPMX19_02745 are separated by 29 nucleotides
MPMX19_02742: MPMX19_02742 - hypothetical protein, at 2,885,962 to 2,886,315
_02742
MPMX19_02743: MPMX19_02743 - Bifunctional protein FolD protein, at 2,886,317 to 2,887,222
_02743
MPMX19_02744: MPMX19_02744 - Magnesium transport protein CorA, at 2,887,219 to 2,888,214
_02744
MPMX19_02745: MPMX19_02745 - putative nicotinate-nucleotide pyrophosphorylase [carboxylating], at 2,888,244 to 2,889,074
_02745
Position (kb)
2887
2888
2889 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2886.313 kb on + strand at 2887.420 kb on + strand, within MPMX19_02744 at 2887.420 kb on + strand, within MPMX19_02744 at 2887.420 kb on + strand, within MPMX19_02744 at 2887.421 kb on - strand, within MPMX19_02744 at 2887.421 kb on - strand, within MPMX19_02744 at 2887.421 kb on - strand, within MPMX19_02744 at 2887.421 kb on - strand, within MPMX19_02744 at 2887.421 kb on - strand, within MPMX19_02744 at 2887.421 kb on - strand, within MPMX19_02744 at 2887.421 kb on - strand, within MPMX19_02744 at 2887.421 kb on - strand, within MPMX19_02744 at 2887.441 kb on + strand, within MPMX19_02744 at 2887.441 kb on + strand, within MPMX19_02744 at 2887.441 kb on + strand, within MPMX19_02744 at 2887.441 kb on + strand, within MPMX19_02744 at 2887.441 kb on + strand, within MPMX19_02744 at 2887.441 kb on + strand, within MPMX19_02744 at 2887.441 kb on + strand, within MPMX19_02744 at 2887.441 kb on + strand, within MPMX19_02744 at 2887.441 kb on + strand, within MPMX19_02744 at 2887.441 kb on + strand, within MPMX19_02744 at 2887.442 kb on - strand, within MPMX19_02744 at 2887.442 kb on - strand, within MPMX19_02744 at 2887.442 kb on - strand, within MPMX19_02744 at 2887.442 kb on - strand, within MPMX19_02744 at 2887.442 kb on - strand, within MPMX19_02744 at 2887.442 kb on - strand, within MPMX19_02744 at 2887.442 kb on - strand, within MPMX19_02744 at 2887.442 kb on - strand, within MPMX19_02744 at 2887.442 kb on - strand, within MPMX19_02744 at 2887.442 kb on - strand, within MPMX19_02744 at 2887.442 kb on - strand, within MPMX19_02744 at 2888.188 kb on + strand at 2888.189 kb on - strand at 2888.212 kb on + strand at 2888.212 kb on + strand at 2888.212 kb on + strand at 2888.212 kb on + strand at 2888.212 kb on + strand at 2888.212 kb on + strand at 2888.212 kb on + strand at 2888.213 kb on - strand at 2888.213 kb on - strand at 2888.223 kb on + strand at 2888.223 kb on + strand at 2888.223 kb on + strand at 2888.223 kb on + strand at 2888.223 kb on + strand at 2888.223 kb on + strand at 2888.223 kb on + strand at 2888.223 kb on + strand at 2888.223 kb on + strand at 2888.223 kb on + strand at 2888.223 kb on + strand at 2888.223 kb on + strand at 2888.223 kb on + strand at 2888.223 kb on + strand at 2888.223 kb on + strand at 2888.223 kb on + strand at 2888.223 kb on + strand at 2888.223 kb on + strand at 2888.223 kb on + strand at 2888.223 kb on + strand at 2888.223 kb on + strand at 2888.223 kb on + strand at 2888.224 kb on - strand at 2888.224 kb on - strand at 2888.224 kb on - strand at 2888.224 kb on - strand at 2888.224 kb on - strand at 2888.224 kb on - strand at 2888.224 kb on - strand at 2888.224 kb on - strand at 2888.224 kb on - strand at 2888.224 kb on - strand at 2888.224 kb on - strand at 2888.224 kb on - strand at 2888.224 kb on - strand at 2888.224 kb on - strand at 2888.224 kb on - strand at 2888.224 kb on - strand at 2888.301 kb on + strand at 2888.301 kb on + strand at 2888.550 kb on + strand, within MPMX19_02745 at 2888.550 kb on + strand, within MPMX19_02745 at 2888.550 kb on + strand, within MPMX19_02745 at 2888.551 kb on - strand, within MPMX19_02745 at 2888.551 kb on - strand, within MPMX19_02745 at 2888.551 kb on - strand, within MPMX19_02745 at 2888.985 kb on + strand, within MPMX19_02745 at 2888.986 kb on - strand, within MPMX19_02745 at 2888.986 kb on - strand, within MPMX19_02745 at 2888.986 kb on - strand, within MPMX19_02745 at 2888.986 kb on - strand, within MPMX19_02745 at 2889.072 kb on + strand at 2889.072 kb on + strand at 2889.073 kb on - strand at 2889.150 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 2,886,313 + -0.5 2,887,420 + MPMX19_02744 0.20 -0.5 2,887,420 + MPMX19_02744 0.20 -0.2 2,887,420 + MPMX19_02744 0.20 -1.5 2,887,421 - MPMX19_02744 0.20 +1.5 2,887,421 - MPMX19_02744 0.20 -0.3 2,887,421 - MPMX19_02744 0.20 -0.1 2,887,421 - MPMX19_02744 0.20 +2.1 2,887,421 - MPMX19_02744 0.20 -0.1 2,887,421 - MPMX19_02744 0.20 -0.3 2,887,421 - MPMX19_02744 0.20 +0.7 2,887,421 - MPMX19_02744 0.20 -0.4 2,887,441 + MPMX19_02744 0.22 -0.5 2,887,441 + MPMX19_02744 0.22 -0.4 2,887,441 + MPMX19_02744 0.22 -0.0 2,887,441 + MPMX19_02744 0.22 -1.9 2,887,441 + MPMX19_02744 0.22 +1.5 2,887,441 + MPMX19_02744 0.22 -0.9 2,887,441 + MPMX19_02744 0.22 +0.3 2,887,441 + MPMX19_02744 0.22 +0.9 2,887,441 + MPMX19_02744 0.22 +0.7 2,887,441 + MPMX19_02744 0.22 +1.3 2,887,442 - MPMX19_02744 0.22 -0.4 2,887,442 - MPMX19_02744 0.22 -1.7 2,887,442 - MPMX19_02744 0.22 +0.5 2,887,442 - MPMX19_02744 0.22 -0.5 2,887,442 - MPMX19_02744 0.22 +0.4 2,887,442 - MPMX19_02744 0.22 +1.4 2,887,442 - MPMX19_02744 0.22 -1.9 2,887,442 - MPMX19_02744 0.22 -1.2 2,887,442 - MPMX19_02744 0.22 +1.7 2,887,442 - MPMX19_02744 0.22 -1.4 2,887,442 - MPMX19_02744 0.22 -0.2 2,888,188 + -0.7 2,888,189 - +0.3 2,888,212 + -0.8 2,888,212 + -1.5 2,888,212 + +0.1 2,888,212 + -0.0 2,888,212 + -0.9 2,888,212 + +0.1 2,888,212 + -1.3 2,888,213 - +0.9 2,888,213 - +0.4 2,888,223 + -0.5 2,888,223 + -1.5 2,888,223 + -1.7 2,888,223 + +0.5 2,888,223 + -1.3 2,888,223 + -0.0 2,888,223 + -0.8 2,888,223 + -0.1 2,888,223 + -0.0 2,888,223 + -1.4 2,888,223 + -1.9 2,888,223 + -0.3 2,888,223 + +1.1 2,888,223 + +0.2 2,888,223 + +0.3 2,888,223 + -0.6 2,888,223 + -0.5 2,888,223 + -0.1 2,888,223 + -1.5 2,888,223 + -0.1 2,888,223 + -0.3 2,888,223 + -2.1 2,888,224 - -1.7 2,888,224 - +0.1 2,888,224 - -1.3 2,888,224 - +0.4 2,888,224 - -0.5 2,888,224 - -0.9 2,888,224 - -0.8 2,888,224 - +0.3 2,888,224 - +1.9 2,888,224 - -0.2 2,888,224 - +0.9 2,888,224 - +0.4 2,888,224 - -0.0 2,888,224 - -0.4 2,888,224 - -1.2 2,888,224 - -0.6 2,888,301 + +0.4 2,888,301 + -1.3 2,888,550 + MPMX19_02745 0.37 -0.3 2,888,550 + MPMX19_02745 0.37 +0.5 2,888,550 + MPMX19_02745 0.37 +0.8 2,888,551 - MPMX19_02745 0.37 -1.3 2,888,551 - MPMX19_02745 0.37 +0.3 2,888,551 - MPMX19_02745 0.37 -0.1 2,888,985 + MPMX19_02745 0.89 -0.9 2,888,986 - MPMX19_02745 0.89 -0.3 2,888,986 - MPMX19_02745 0.89 -1.6 2,888,986 - MPMX19_02745 0.89 -1.1 2,888,986 - MPMX19_02745 0.89 -1.3 2,889,072 + -1.0 2,889,072 + -1.0 2,889,073 - -0.0 2,889,150 - -0.7
Or see this region's nucleotide sequence