Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_02725 and MPMX19_02726 overlap by 1 nucleotides MPMX19_02726 and MPMX19_02727 are separated by 67 nucleotides MPMX19_02727 and MPMX19_02728 are separated by 325 nucleotides
MPMX19_02725: MPMX19_02725 - N-acetylmuramate/N-acetylglucosamine kinase, at 2,865,524 to 2,866,552
_02725
MPMX19_02726: MPMX19_02726 - tRNA threonylcarbamoyladenosine biosynthesis protein TsaE, at 2,866,552 to 2,867,034
_02726
MPMX19_02727: MPMX19_02727 - hypothetical protein, at 2,867,102 to 2,867,539
_02727
MPMX19_02728: MPMX19_02728 - Ferredoxin--NADP reductase, at 2,867,865 to 2,868,902
_02728
Position (kb)
2867
2868 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2866.128 kb on + strand, within MPMX19_02725 at 2866.128 kb on + strand, within MPMX19_02725 at 2866.128 kb on + strand, within MPMX19_02725 at 2866.128 kb on + strand, within MPMX19_02725 at 2866.128 kb on + strand, within MPMX19_02725 at 2866.128 kb on + strand, within MPMX19_02725 at 2866.128 kb on + strand, within MPMX19_02725 at 2866.128 kb on + strand, within MPMX19_02725 at 2866.128 kb on + strand, within MPMX19_02725 at 2866.128 kb on + strand, within MPMX19_02725 at 2866.128 kb on + strand, within MPMX19_02725 at 2866.128 kb on + strand, within MPMX19_02725 at 2866.128 kb on + strand, within MPMX19_02725 at 2866.129 kb on - strand, within MPMX19_02725 at 2866.129 kb on - strand, within MPMX19_02725 at 2866.129 kb on - strand, within MPMX19_02725 at 2866.129 kb on - strand, within MPMX19_02725 at 2866.129 kb on - strand, within MPMX19_02725 at 2866.129 kb on - strand, within MPMX19_02725 at 2866.129 kb on - strand, within MPMX19_02725 at 2866.129 kb on - strand, within MPMX19_02725 at 2866.129 kb on - strand, within MPMX19_02725 at 2866.129 kb on - strand, within MPMX19_02725 at 2866.129 kb on - strand, within MPMX19_02725 at 2866.129 kb on - strand, within MPMX19_02725 at 2866.129 kb on - strand, within MPMX19_02725 at 2866.129 kb on - strand, within MPMX19_02725 at 2866.129 kb on - strand, within MPMX19_02725 at 2866.129 kb on - strand, within MPMX19_02725 at 2866.209 kb on + strand, within MPMX19_02725 at 2866.209 kb on + strand, within MPMX19_02725 at 2866.209 kb on + strand, within MPMX19_02725 at 2866.209 kb on + strand, within MPMX19_02725 at 2866.209 kb on + strand, within MPMX19_02725 at 2866.210 kb on - strand, within MPMX19_02725 at 2866.210 kb on - strand, within MPMX19_02725 at 2866.210 kb on - strand, within MPMX19_02725 at 2866.210 kb on - strand, within MPMX19_02725 at 2866.440 kb on + strand, within MPMX19_02725 at 2866.440 kb on + strand, within MPMX19_02725 at 2866.441 kb on - strand, within MPMX19_02725 at 2866.441 kb on - strand, within MPMX19_02725 at 2866.553 kb on + strand at 2866.553 kb on + strand at 2866.553 kb on + strand at 2866.553 kb on + strand at 2866.553 kb on + strand at 2866.553 kb on + strand at 2866.554 kb on - strand at 2866.554 kb on - strand at 2866.554 kb on - strand at 2866.554 kb on - strand at 2866.554 kb on - strand at 2866.554 kb on - strand at 2866.554 kb on - strand at 2866.554 kb on - strand at 2866.554 kb on - strand at 2867.044 kb on - strand at 2867.044 kb on - strand at 2867.103 kb on + strand at 2867.103 kb on + strand at 2867.103 kb on + strand at 2867.103 kb on + strand at 2867.104 kb on - strand at 2867.104 kb on - strand at 2867.104 kb on - strand at 2867.301 kb on + strand, within MPMX19_02727 at 2867.302 kb on - strand, within MPMX19_02727 at 2867.424 kb on + strand, within MPMX19_02727 at 2867.424 kb on + strand, within MPMX19_02727 at 2867.424 kb on + strand, within MPMX19_02727 at 2867.424 kb on + strand, within MPMX19_02727 at 2867.424 kb on + strand, within MPMX19_02727 at 2867.425 kb on - strand, within MPMX19_02727 at 2867.425 kb on - strand, within MPMX19_02727 at 2867.425 kb on - strand, within MPMX19_02727 at 2867.425 kb on - strand, within MPMX19_02727 at 2867.425 kb on - strand, within MPMX19_02727 at 2867.425 kb on - strand, within MPMX19_02727 at 2867.653 kb on + strand at 2867.663 kb on + strand at 2867.664 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 2,866,128 + MPMX19_02725 0.59 -0.6 2,866,128 + MPMX19_02725 0.59 +0.1 2,866,128 + MPMX19_02725 0.59 -1.7 2,866,128 + MPMX19_02725 0.59 -0.1 2,866,128 + MPMX19_02725 0.59 -0.7 2,866,128 + MPMX19_02725 0.59 -0.8 2,866,128 + MPMX19_02725 0.59 -0.7 2,866,128 + MPMX19_02725 0.59 +0.6 2,866,128 + MPMX19_02725 0.59 +0.6 2,866,128 + MPMX19_02725 0.59 -1.1 2,866,128 + MPMX19_02725 0.59 -2.0 2,866,128 + MPMX19_02725 0.59 -2.3 2,866,128 + MPMX19_02725 0.59 -0.5 2,866,129 - MPMX19_02725 0.59 +0.3 2,866,129 - MPMX19_02725 0.59 -0.7 2,866,129 - MPMX19_02725 0.59 +1.5 2,866,129 - MPMX19_02725 0.59 +0.5 2,866,129 - MPMX19_02725 0.59 -0.3 2,866,129 - MPMX19_02725 0.59 +0.6 2,866,129 - MPMX19_02725 0.59 -0.6 2,866,129 - MPMX19_02725 0.59 -1.5 2,866,129 - MPMX19_02725 0.59 -1.1 2,866,129 - MPMX19_02725 0.59 -0.6 2,866,129 - MPMX19_02725 0.59 +1.9 2,866,129 - MPMX19_02725 0.59 -2.3 2,866,129 - MPMX19_02725 0.59 -0.6 2,866,129 - MPMX19_02725 0.59 -0.3 2,866,129 - MPMX19_02725 0.59 +0.6 2,866,129 - MPMX19_02725 0.59 -0.7 2,866,209 + MPMX19_02725 0.67 -0.1 2,866,209 + MPMX19_02725 0.67 -0.8 2,866,209 + MPMX19_02725 0.67 -0.1 2,866,209 + MPMX19_02725 0.67 -0.3 2,866,209 + MPMX19_02725 0.67 -0.4 2,866,210 - MPMX19_02725 0.67 -0.9 2,866,210 - MPMX19_02725 0.67 +1.1 2,866,210 - MPMX19_02725 0.67 -0.6 2,866,210 - MPMX19_02725 0.67 -0.0 2,866,440 + MPMX19_02725 0.89 -2.4 2,866,440 + MPMX19_02725 0.89 -1.1 2,866,441 - MPMX19_02725 0.89 -0.6 2,866,441 - MPMX19_02725 0.89 -0.9 2,866,553 + -0.2 2,866,553 + +0.7 2,866,553 + +0.3 2,866,553 + -1.1 2,866,553 + -0.4 2,866,553 + -0.7 2,866,554 - +0.4 2,866,554 - -1.3 2,866,554 - -0.5 2,866,554 - -0.6 2,866,554 - +0.3 2,866,554 - +0.2 2,866,554 - -0.5 2,866,554 - -0.6 2,866,554 - +0.9 2,867,044 - -1.3 2,867,044 - -0.7 2,867,103 + -0.3 2,867,103 + -0.8 2,867,103 + -0.3 2,867,103 + +0.2 2,867,104 - +0.9 2,867,104 - -0.5 2,867,104 - +0.6 2,867,301 + MPMX19_02727 0.45 -1.5 2,867,302 - MPMX19_02727 0.46 -0.1 2,867,424 + MPMX19_02727 0.74 +0.3 2,867,424 + MPMX19_02727 0.74 -0.7 2,867,424 + MPMX19_02727 0.74 -0.7 2,867,424 + MPMX19_02727 0.74 -0.8 2,867,424 + MPMX19_02727 0.74 -1.1 2,867,425 - MPMX19_02727 0.74 -1.0 2,867,425 - MPMX19_02727 0.74 -1.8 2,867,425 - MPMX19_02727 0.74 -0.8 2,867,425 - MPMX19_02727 0.74 +1.4 2,867,425 - MPMX19_02727 0.74 +2.3 2,867,425 - MPMX19_02727 0.74 +0.1 2,867,653 + -0.8 2,867,663 + -1.1 2,867,664 - -2.3
Or see this region's nucleotide sequence