Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_02346 and MPMX19_02347 are separated by 4 nucleotides MPMX19_02347 and MPMX19_02348 are separated by 13 nucleotides MPMX19_02348 and MPMX19_02349 overlap by 8 nucleotides MPMX19_02349 and MPMX19_02350 are separated by 8 nucleotides MPMX19_02350 and MPMX19_02351 overlap by 4 nucleotides MPMX19_02351 and MPMX19_02352 are separated by 2 nucleotides
MPMX19_02346: MPMX19_02346 - hypothetical protein, at 2,473,181 to 2,475,517
_02346
MPMX19_02347: MPMX19_02347 - hypothetical protein, at 2,475,522 to 2,475,692
_02347
MPMX19_02348: MPMX19_02348 - hypothetical protein, at 2,475,706 to 2,475,888
_02348
MPMX19_02349: MPMX19_02349 - hypothetical protein, at 2,475,881 to 2,476,120
_02349
MPMX19_02350: MPMX19_02350 - hypothetical protein, at 2,476,129 to 2,476,404
_02350
MPMX19_02351: MPMX19_02351 - hypothetical protein, at 2,476,401 to 2,476,868
_02351
MPMX19_02352: MPMX19_02352 - hypothetical protein, at 2,476,871 to 2,477,155
_02352
Position (kb)
2475
2476 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2475.036 kb on + strand, within MPMX19_02346 at 2475.036 kb on + strand, within MPMX19_02346 at 2475.036 kb on + strand, within MPMX19_02346 at 2475.036 kb on + strand, within MPMX19_02346 at 2475.036 kb on + strand, within MPMX19_02346 at 2475.036 kb on + strand, within MPMX19_02346 at 2475.036 kb on + strand, within MPMX19_02346 at 2475.036 kb on + strand, within MPMX19_02346 at 2475.036 kb on + strand, within MPMX19_02346 at 2475.036 kb on + strand, within MPMX19_02346 at 2475.036 kb on + strand, within MPMX19_02346 at 2475.036 kb on + strand, within MPMX19_02346 at 2475.036 kb on + strand, within MPMX19_02346 at 2475.036 kb on + strand, within MPMX19_02346 at 2475.036 kb on + strand, within MPMX19_02346 at 2475.036 kb on + strand, within MPMX19_02346 at 2475.036 kb on + strand, within MPMX19_02346 at 2475.036 kb on + strand, within MPMX19_02346 at 2475.036 kb on + strand, within MPMX19_02346 at 2475.036 kb on + strand, within MPMX19_02346 at 2475.037 kb on - strand, within MPMX19_02346 at 2475.037 kb on - strand, within MPMX19_02346 at 2475.037 kb on - strand, within MPMX19_02346 at 2475.037 kb on - strand, within MPMX19_02346 at 2475.037 kb on - strand, within MPMX19_02346 at 2475.037 kb on - strand, within MPMX19_02346 at 2475.037 kb on - strand, within MPMX19_02346 at 2475.037 kb on - strand, within MPMX19_02346 at 2475.037 kb on - strand, within MPMX19_02346 at 2475.037 kb on - strand, within MPMX19_02346 at 2475.037 kb on - strand, within MPMX19_02346 at 2475.037 kb on - strand, within MPMX19_02346 at 2475.037 kb on - strand, within MPMX19_02346 at 2475.037 kb on - strand, within MPMX19_02346 at 2475.037 kb on - strand, within MPMX19_02346 at 2475.037 kb on - strand, within MPMX19_02346 at 2475.037 kb on - strand, within MPMX19_02346 at 2475.037 kb on - strand, within MPMX19_02346 at 2475.037 kb on - strand, within MPMX19_02346 at 2475.037 kb on - strand, within MPMX19_02346 at 2475.040 kb on + strand, within MPMX19_02346 at 2475.041 kb on - strand, within MPMX19_02346 at 2475.459 kb on + strand at 2475.459 kb on + strand at 2475.459 kb on + strand at 2475.459 kb on + strand at 2475.459 kb on + strand at 2475.459 kb on + strand at 2475.459 kb on + strand at 2475.459 kb on + strand at 2475.460 kb on - strand at 2475.460 kb on - strand at 2475.460 kb on - strand at 2475.460 kb on - strand at 2475.460 kb on - strand at 2475.460 kb on - strand at 2475.460 kb on - strand at 2475.460 kb on - strand at 2475.460 kb on - strand at 2475.460 kb on - strand at 2475.460 kb on - strand at 2475.523 kb on + strand at 2475.523 kb on + strand at 2475.523 kb on + strand at 2475.523 kb on + strand at 2475.523 kb on + strand at 2475.523 kb on + strand at 2475.523 kb on + strand at 2475.523 kb on + strand at 2475.524 kb on - strand at 2475.524 kb on - strand at 2475.524 kb on - strand at 2475.524 kb on - strand at 2475.524 kb on - strand at 2475.524 kb on - strand at 2475.524 kb on - strand at 2475.524 kb on - strand at 2475.524 kb on - strand at 2475.524 kb on - strand at 2475.524 kb on - strand at 2475.524 kb on - strand at 2475.524 kb on - strand at 2475.524 kb on - strand at 2475.524 kb on - strand at 2475.524 kb on - strand at 2475.683 kb on + strand at 2475.683 kb on + strand at 2475.683 kb on + strand at 2475.683 kb on + strand at 2475.683 kb on + strand at 2475.683 kb on + strand at 2475.683 kb on + strand at 2475.683 kb on + strand at 2475.683 kb on + strand at 2475.683 kb on + strand at 2475.683 kb on + strand at 2475.683 kb on + strand at 2475.683 kb on + strand at 2475.683 kb on + strand at 2475.683 kb on + strand at 2475.683 kb on + strand at 2475.683 kb on + strand at 2475.683 kb on + strand at 2475.683 kb on + strand at 2475.683 kb on + strand at 2475.683 kb on + strand at 2475.683 kb on + strand at 2475.683 kb on + strand at 2475.683 kb on + strand at 2475.684 kb on - strand at 2475.684 kb on - strand at 2475.684 kb on - strand at 2475.684 kb on - strand at 2475.684 kb on - strand at 2475.684 kb on - strand at 2475.684 kb on - strand at 2475.684 kb on - strand at 2475.684 kb on - strand at 2475.684 kb on - strand at 2475.684 kb on - strand at 2475.684 kb on - strand at 2475.684 kb on - strand at 2475.684 kb on - strand at 2475.684 kb on - strand at 2475.684 kb on - strand at 2475.684 kb on - strand at 2475.684 kb on - strand at 2475.707 kb on + strand at 2475.803 kb on + strand, within MPMX19_02348 at 2475.803 kb on + strand, within MPMX19_02348 at 2475.804 kb on - strand, within MPMX19_02348 at 2475.804 kb on - strand, within MPMX19_02348 at 2475.804 kb on - strand, within MPMX19_02348 at 2476.099 kb on + strand at 2476.099 kb on + strand at 2476.099 kb on + strand at 2476.100 kb on - strand at 2476.100 kb on - strand at 2476.145 kb on + strand at 2476.145 kb on + strand at 2476.145 kb on + strand at 2476.145 kb on + strand at 2476.145 kb on + strand at 2476.146 kb on - strand at 2476.146 kb on - strand at 2476.146 kb on - strand at 2476.146 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 2,475,036 + MPMX19_02346 0.79 -0.8 2,475,036 + MPMX19_02346 0.79 -0.2 2,475,036 + MPMX19_02346 0.79 -1.6 2,475,036 + MPMX19_02346 0.79 -0.8 2,475,036 + MPMX19_02346 0.79 +0.2 2,475,036 + MPMX19_02346 0.79 +0.7 2,475,036 + MPMX19_02346 0.79 -0.6 2,475,036 + MPMX19_02346 0.79 -1.0 2,475,036 + MPMX19_02346 0.79 -0.5 2,475,036 + MPMX19_02346 0.79 -2.2 2,475,036 + MPMX19_02346 0.79 -1.5 2,475,036 + MPMX19_02346 0.79 -1.0 2,475,036 + MPMX19_02346 0.79 +0.4 2,475,036 + MPMX19_02346 0.79 +1.3 2,475,036 + MPMX19_02346 0.79 -0.2 2,475,036 + MPMX19_02346 0.79 -0.5 2,475,036 + MPMX19_02346 0.79 -0.3 2,475,036 + MPMX19_02346 0.79 -0.8 2,475,036 + MPMX19_02346 0.79 +0.2 2,475,036 + MPMX19_02346 0.79 +1.8 2,475,037 - MPMX19_02346 0.79 +1.1 2,475,037 - MPMX19_02346 0.79 -0.8 2,475,037 - MPMX19_02346 0.79 -0.8 2,475,037 - MPMX19_02346 0.79 -0.5 2,475,037 - MPMX19_02346 0.79 -1.9 2,475,037 - MPMX19_02346 0.79 -0.5 2,475,037 - MPMX19_02346 0.79 -0.8 2,475,037 - MPMX19_02346 0.79 +1.0 2,475,037 - MPMX19_02346 0.79 +0.3 2,475,037 - MPMX19_02346 0.79 +0.1 2,475,037 - MPMX19_02346 0.79 -2.6 2,475,037 - MPMX19_02346 0.79 +0.5 2,475,037 - MPMX19_02346 0.79 +1.2 2,475,037 - MPMX19_02346 0.79 +1.1 2,475,037 - MPMX19_02346 0.79 +0.4 2,475,037 - MPMX19_02346 0.79 -0.7 2,475,037 - MPMX19_02346 0.79 -1.2 2,475,037 - MPMX19_02346 0.79 -2.4 2,475,037 - MPMX19_02346 0.79 +1.7 2,475,037 - MPMX19_02346 0.79 +0.2 2,475,040 + MPMX19_02346 0.80 -1.2 2,475,041 - MPMX19_02346 0.80 -0.4 2,475,459 + -2.0 2,475,459 + +0.1 2,475,459 + -0.3 2,475,459 + -0.3 2,475,459 + -1.5 2,475,459 + -0.1 2,475,459 + -0.1 2,475,459 + -0.5 2,475,460 - -1.2 2,475,460 - +0.2 2,475,460 - +0.5 2,475,460 - -0.8 2,475,460 - -0.5 2,475,460 - -0.8 2,475,460 - +0.4 2,475,460 - +0.9 2,475,460 - -2.3 2,475,460 - -1.2 2,475,460 - -0.1 2,475,523 + +1.0 2,475,523 + +1.6 2,475,523 + +0.8 2,475,523 + +0.0 2,475,523 + -1.1 2,475,523 + -0.8 2,475,523 + -0.3 2,475,523 + -2.0 2,475,524 - +1.8 2,475,524 - +0.0 2,475,524 - -0.5 2,475,524 - -1.3 2,475,524 - +0.9 2,475,524 - -0.3 2,475,524 - +0.4 2,475,524 - -1.5 2,475,524 - +0.5 2,475,524 - -2.1 2,475,524 - -1.9 2,475,524 - +0.2 2,475,524 - +0.1 2,475,524 - +0.4 2,475,524 - +0.4 2,475,524 - -1.9 2,475,683 + +0.2 2,475,683 + +1.3 2,475,683 + -1.0 2,475,683 + +0.8 2,475,683 + -1.8 2,475,683 + -0.3 2,475,683 + +0.8 2,475,683 + -0.3 2,475,683 + -2.2 2,475,683 + -1.3 2,475,683 + +0.0 2,475,683 + +1.0 2,475,683 + -2.6 2,475,683 + -0.7 2,475,683 + -1.3 2,475,683 + -0.7 2,475,683 + -0.3 2,475,683 + -0.8 2,475,683 + -1.9 2,475,683 + -0.3 2,475,683 + -0.8 2,475,683 + -0.3 2,475,683 + -1.3 2,475,683 + +0.1 2,475,684 - +0.4 2,475,684 - +0.0 2,475,684 - -0.3 2,475,684 - -0.9 2,475,684 - -0.1 2,475,684 - -1.3 2,475,684 - -0.3 2,475,684 - -0.9 2,475,684 - -1.7 2,475,684 - +0.2 2,475,684 - -0.6 2,475,684 - -0.8 2,475,684 - +0.2 2,475,684 - -0.1 2,475,684 - -0.2 2,475,684 - -0.7 2,475,684 - +0.8 2,475,684 - +0.8 2,475,707 + +0.1 2,475,803 + MPMX19_02348 0.53 +0.1 2,475,803 + MPMX19_02348 0.53 +0.1 2,475,804 - MPMX19_02348 0.54 +0.5 2,475,804 - MPMX19_02348 0.54 -1.4 2,475,804 - MPMX19_02348 0.54 -1.0 2,476,099 + +0.8 2,476,099 + -0.5 2,476,099 + +0.6 2,476,100 - +0.2 2,476,100 - -0.0 2,476,145 + +0.8 2,476,145 + -1.5 2,476,145 + +0.1 2,476,145 + -3.0 2,476,145 + -0.8 2,476,146 - -0.6 2,476,146 - -0.8 2,476,146 - -1.0 2,476,146 - -1.2
Or see this region's nucleotide sequence