Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_01977 and MPMX19_01978 are separated by 128 nucleotides MPMX19_01978 and MPMX19_01979 overlap by 4 nucleotides MPMX19_01979 and MPMX19_01980 are separated by 417 nucleotides
MPMX19_01977: MPMX19_01977 - hypothetical protein, at 2,060,260 to 2,060,928
_01977
MPMX19_01978: MPMX19_01978 - hypothetical protein, at 2,061,057 to 2,061,764
_01978
MPMX19_01979: MPMX19_01979 - hypothetical protein, at 2,061,761 to 2,062,369
_01979
MPMX19_01980: MPMX19_01980 - hypothetical protein, at 2,062,787 to 2,063,353
_01980
Position (kb)
2061
2062
2063 Strain fitness (log2 ratio)
-1
0
1
2 at 2061.559 kb on + strand, within MPMX19_01978 at 2061.559 kb on + strand, within MPMX19_01978 at 2061.559 kb on + strand, within MPMX19_01978 at 2061.559 kb on + strand, within MPMX19_01978 at 2061.987 kb on + strand, within MPMX19_01979 at 2062.092 kb on + strand, within MPMX19_01979 at 2062.092 kb on + strand, within MPMX19_01979 at 2062.092 kb on + strand, within MPMX19_01979 at 2062.092 kb on + strand, within MPMX19_01979 at 2062.092 kb on + strand, within MPMX19_01979 at 2062.092 kb on + strand, within MPMX19_01979 at 2062.092 kb on + strand, within MPMX19_01979 at 2062.092 kb on + strand, within MPMX19_01979 at 2062.092 kb on + strand, within MPMX19_01979 at 2062.093 kb on - strand, within MPMX19_01979 at 2062.093 kb on - strand, within MPMX19_01979 at 2062.093 kb on - strand, within MPMX19_01979 at 2062.093 kb on - strand, within MPMX19_01979 at 2062.093 kb on - strand, within MPMX19_01979 at 2062.093 kb on - strand, within MPMX19_01979 at 2062.724 kb on + strand at 2062.725 kb on - strand at 2062.794 kb on + strand at 2062.794 kb on + strand at 2062.795 kb on - strand at 2063.096 kb on - strand, within MPMX19_01980 at 2063.096 kb on - strand, within MPMX19_01980 at 2063.096 kb on - strand, within MPMX19_01980 at 2063.096 kb on - strand, within MPMX19_01980 at 2063.185 kb on - strand, within MPMX19_01980
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 2,061,559 + MPMX19_01978 0.71 +1.9 2,061,559 + MPMX19_01978 0.71 +0.8 2,061,559 + MPMX19_01978 0.71 -1.5 2,061,559 + MPMX19_01978 0.71 -0.1 2,061,987 + MPMX19_01979 0.37 -0.1 2,062,092 + MPMX19_01979 0.54 -0.6 2,062,092 + MPMX19_01979 0.54 -0.2 2,062,092 + MPMX19_01979 0.54 +0.1 2,062,092 + MPMX19_01979 0.54 -0.1 2,062,092 + MPMX19_01979 0.54 -0.9 2,062,092 + MPMX19_01979 0.54 -1.1 2,062,092 + MPMX19_01979 0.54 -0.4 2,062,092 + MPMX19_01979 0.54 -0.6 2,062,092 + MPMX19_01979 0.54 -0.9 2,062,093 - MPMX19_01979 0.55 +1.1 2,062,093 - MPMX19_01979 0.55 -1.2 2,062,093 - MPMX19_01979 0.55 -0.6 2,062,093 - MPMX19_01979 0.55 -0.6 2,062,093 - MPMX19_01979 0.55 -0.3 2,062,093 - MPMX19_01979 0.55 -0.3 2,062,724 + -0.3 2,062,725 - -0.7 2,062,794 + -1.6 2,062,794 + -1.1 2,062,795 - -0.5 2,063,096 - MPMX19_01980 0.54 +1.0 2,063,096 - MPMX19_01980 0.54 -0.6 2,063,096 - MPMX19_01980 0.54 -1.1 2,063,096 - MPMX19_01980 0.54 -1.3 2,063,185 - MPMX19_01980 0.70 -1.4
Or see this region's nucleotide sequence