Strain Fitness in Azospirillum sp. SherDot2

Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01964

Experiment: NF

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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Per-strain Table

Position	Strand	LocusTag	Fraction	NF
				remove
2,044,840	+	MPMX19_01963	0.23	-0.3
2,044,840	+	MPMX19_01963	0.23	-0.7
2,044,840	+	MPMX19_01963	0.23	-0.3
2,044,840	+	MPMX19_01963	0.23	-0.9
2,044,841	-	MPMX19_01963	0.23	-0.9
2,044,841	-	MPMX19_01963	0.23	-0.3
2,044,841	-	MPMX19_01963	0.23	+0.5
2,044,841	-	MPMX19_01963	0.23	-2.1
2,044,852	+	MPMX19_01963	0.24	-0.7
2,044,853	-	MPMX19_01963	0.24	-2.3
2,044,853	-	MPMX19_01963	0.24	+0.3
2,044,853	-	MPMX19_01963	0.24	+0.6
2,044,921	+	MPMX19_01963	0.30	-0.4
2,044,921	+	MPMX19_01963	0.30	-0.8
2,044,921	+	MPMX19_01963	0.30	+0.7
2,044,921	+	MPMX19_01963	0.30	-1.5
2,044,921	+	MPMX19_01963	0.30	+1.0
2,044,921	+	MPMX19_01963	0.30	-0.1
2,044,921	+	MPMX19_01963	0.30	-0.5
2,044,921	+	MPMX19_01963	0.30	-0.5
2,044,921	+	MPMX19_01963	0.30	-1.5
2,044,921	+	MPMX19_01963	0.30	+0.1
2,044,921	+	MPMX19_01963	0.30	-1.7
2,044,921	+	MPMX19_01963	0.30	-0.3
2,044,922	-	MPMX19_01963	0.30	-0.5
2,044,922	-	MPMX19_01963	0.30	+1.0
2,044,922	-	MPMX19_01963	0.30	-0.5
2,044,922	-	MPMX19_01963	0.30	+0.0
2,044,922	-	MPMX19_01963	0.30	-1.2
2,045,017	+	MPMX19_01963	0.39	-1.1
2,045,017	+	MPMX19_01963	0.39	-0.1
2,045,017	+	MPMX19_01963	0.39	-0.1
2,045,017	+	MPMX19_01963	0.39	-2.1
2,045,017	+	MPMX19_01963	0.39	-1.7
2,045,017	+	MPMX19_01963	0.39	-0.6
2,045,017	+	MPMX19_01963	0.39	-1.2
2,045,017	+	MPMX19_01963	0.39	+1.5
2,045,017	+	MPMX19_01963	0.39	+0.1
2,045,017	+	MPMX19_01963	0.39	-1.3
2,045,017	+	MPMX19_01963	0.39	+0.4
2,045,017	+	MPMX19_01963	0.39	-0.0
2,045,017	+	MPMX19_01963	0.39	-1.0
2,045,017	+	MPMX19_01963	0.39	+0.5
2,045,017	+	MPMX19_01963	0.39	-0.2
2,045,017	+	MPMX19_01963	0.39	-0.2
2,045,017	+	MPMX19_01963	0.39	-1.0
2,045,017	+	MPMX19_01963	0.39	-0.5
2,045,017	+	MPMX19_01963	0.39	-1.6
2,045,017	+	MPMX19_01963	0.39	-0.1
2,045,017	+	MPMX19_01963	0.39	-0.3
2,045,017	+	MPMX19_01963	0.39	-1.2
2,045,017	+	MPMX19_01963	0.39	+0.7
2,045,017	+	MPMX19_01963	0.39	-1.3
2,045,017	+	MPMX19_01963	0.39	-0.8
2,045,017	+	MPMX19_01963	0.39	+0.1
2,045,017	+	MPMX19_01963	0.39	-0.5
2,045,017	+	MPMX19_01963	0.39	-1.1
2,045,017	+	MPMX19_01963	0.39	-1.9
2,045,017	+	MPMX19_01963	0.39	-1.6
2,045,017	+	MPMX19_01963	0.39	-0.6
2,045,018	-	MPMX19_01963	0.39	-0.9
2,045,018	-	MPMX19_01963	0.39	-0.5
2,045,018	-	MPMX19_01963	0.39	-1.0
2,045,018	-	MPMX19_01963	0.39	-0.2
2,045,018	-	MPMX19_01963	0.39	+0.7
2,045,018	-	MPMX19_01963	0.39	-0.7
2,045,018	-	MPMX19_01963	0.39	-0.1
2,045,018	-	MPMX19_01963	0.39	-0.8
2,045,018	-	MPMX19_01963	0.39	+0.5
2,045,018	-	MPMX19_01963	0.39	-1.9
2,045,018	-	MPMX19_01963	0.39	-0.9
2,045,018	-	MPMX19_01963	0.39	-1.2
2,045,018	-	MPMX19_01963	0.39	+0.4
2,045,018	-	MPMX19_01963	0.39	-0.4
2,045,018	-	MPMX19_01963	0.39	-1.1
2,045,018	-	MPMX19_01963	0.39	-2.2
2,045,018	-	MPMX19_01963	0.39	+0.2
2,045,018	-	MPMX19_01963	0.39	-0.6
2,045,018	-	MPMX19_01963	0.39	-0.6
2,045,018	-	MPMX19_01963	0.39	-0.2
2,045,018	-	MPMX19_01963	0.39	-0.5
2,045,018	-	MPMX19_01963	0.39	+0.2
2,045,018	-	MPMX19_01963	0.39	-0.8
2,045,018	-	MPMX19_01963	0.39	-0.6
2,045,018	-	MPMX19_01963	0.39	-1.0
2,045,018	-	MPMX19_01963	0.39	-3.0
2,045,018	-	MPMX19_01963	0.39	-1.0
2,045,018	-	MPMX19_01963	0.39	-0.4
2,045,018	-	MPMX19_01963	0.39	-0.2
2,045,018	-	MPMX19_01963	0.39	+0.3
2,045,018	-	MPMX19_01963	0.39	-0.6
2,045,050	+	MPMX19_01963	0.42	-0.9
2,045,050	+	MPMX19_01963	0.42	+0.8
2,045,050	+	MPMX19_01963	0.42	-1.5
2,045,050	+	MPMX19_01963	0.42	-1.3
2,045,050	+	MPMX19_01963	0.42	-1.5
2,045,050	+	MPMX19_01963	0.42	-2.0
2,045,050	+	MPMX19_01963	0.42	-0.6
2,045,050	+	MPMX19_01963	0.42	-1.5
2,045,050	+	MPMX19_01963	0.42	-0.5
2,045,050	+	MPMX19_01963	0.42	-0.5
2,045,050	+	MPMX19_01963	0.42	+1.0
2,045,050	+	MPMX19_01963	0.42	-0.9
2,045,050	+	MPMX19_01963	0.42	-0.9
2,045,050	+	MPMX19_01963	0.42	-1.1
2,045,050	+	MPMX19_01963	0.42	-1.2
2,045,050	+	MPMX19_01963	0.42	-1.4
2,045,050	+	MPMX19_01963	0.42	-0.5
2,045,050	+	MPMX19_01963	0.42	-1.0
2,045,050	+	MPMX19_01963	0.42	-0.3
2,045,050	+	MPMX19_01963	0.42	+1.2
2,045,050	+	MPMX19_01963	0.42	-1.5
2,045,050	+	MPMX19_01963	0.42	+0.4
2,045,050	+	MPMX19_01963	0.42	-0.6
2,045,050	+	MPMX19_01963	0.42	+1.1
2,045,050	+	MPMX19_01963	0.42	-0.5
2,045,050	+	MPMX19_01963	0.42	-1.6
2,045,050	+	MPMX19_01963	0.42	-0.9
2,045,050	+	MPMX19_01963	0.42	+0.4
2,045,050	+	MPMX19_01963	0.42	-0.8
2,045,050	+	MPMX19_01963	0.42	-1.3
2,045,050	+	MPMX19_01963	0.42	+0.2
2,045,050	+	MPMX19_01963	0.42	+0.9
2,045,050	+	MPMX19_01963	0.42	-0.5
2,045,050	+	MPMX19_01963	0.42	-0.4
2,045,050	+	MPMX19_01963	0.42	-1.3
2,045,050	+	MPMX19_01963	0.42	-0.3
2,045,051	-	MPMX19_01963	0.42	+0.3
2,045,051	-	MPMX19_01963	0.42	+0.9
2,045,051	-	MPMX19_01963	0.42	-0.5
2,045,051	-	MPMX19_01963	0.42	+0.0
2,045,051	-	MPMX19_01963	0.42	-0.0
2,045,051	-	MPMX19_01963	0.42	+0.2
2,045,051	-	MPMX19_01963	0.42	+1.3
2,045,051	-	MPMX19_01963	0.42	-0.5
2,045,051	-	MPMX19_01963	0.42	-1.3
2,045,051	-	MPMX19_01963	0.42	-0.6
2,045,051	-	MPMX19_01963	0.42	+0.2
2,045,051	-	MPMX19_01963	0.42	+0.9
2,045,051	-	MPMX19_01963	0.42	-0.4
2,045,051	-	MPMX19_01963	0.42	-0.1
2,045,051	-	MPMX19_01963	0.42	-0.1
2,045,051	-	MPMX19_01963	0.42	+1.5
2,045,051	-	MPMX19_01963	0.42	+0.2
2,045,051	-	MPMX19_01963	0.42	+0.3
2,045,051	-	MPMX19_01963	0.42	-1.8
2,045,051	-	MPMX19_01963	0.42	-0.7
2,045,051	-	MPMX19_01963	0.42	-0.7
2,045,051	-	MPMX19_01963	0.42	-1.5
2,045,051	-	MPMX19_01963	0.42	-0.2
2,045,051	-	MPMX19_01963	0.42	-0.6
2,045,051	-	MPMX19_01963	0.42	-1.4
2,045,051	-	MPMX19_01963	0.42	-2.7
2,045,051	-	MPMX19_01963	0.42	-0.4
2,045,051	-	MPMX19_01963	0.42	-2.7
2,045,051	-	MPMX19_01963	0.42	+0.6
2,045,051	-	MPMX19_01963	0.42	-1.7
2,045,051	-	MPMX19_01963	0.42	-0.4
2,045,056	+	MPMX19_01963	0.43	+0.5
2,045,056	+	MPMX19_01963	0.43	-0.6
2,045,056	+	MPMX19_01963	0.43	-0.7
2,045,056	+	MPMX19_01963	0.43	+0.7
2,045,056	+	MPMX19_01963	0.43	-1.3
2,045,056	+	MPMX19_01963	0.43	+0.1
2,045,057	-	MPMX19_01963	0.43	+0.1
2,045,057	-	MPMX19_01963	0.43	+0.5
2,045,057	-	MPMX19_01963	0.43	-1.0
2,045,057	-	MPMX19_01963	0.43	-0.2
2,045,057	-	MPMX19_01963	0.43	-0.5
2,045,206	+	MPMX19_01963	0.57	-0.8
2,045,206	+	MPMX19_01963	0.57	-0.6
2,045,206	+	MPMX19_01963	0.57	-0.2
2,045,206	+	MPMX19_01963	0.57	+0.0
2,045,206	+	MPMX19_01963	0.57	-0.1
2,045,206	+	MPMX19_01963	0.57	-1.1
2,045,207	-	MPMX19_01963	0.57	-0.6
2,045,207	-	MPMX19_01963	0.57	+1.0
2,045,207	-	MPMX19_01963	0.57	+0.7
2,045,207	-	MPMX19_01963	0.57	+1.3
2,045,207	-	MPMX19_01963	0.57	+0.3
2,045,233	+	MPMX19_01963	0.59	+0.7
2,045,233	+	MPMX19_01963	0.59	+0.6
2,045,233	+	MPMX19_01963	0.59	-0.2
2,045,233	+	MPMX19_01963	0.59	+0.5
2,045,234	-	MPMX19_01963	0.59	-2.4
2,045,234	-	MPMX19_01963	0.59	-0.9
2,045,234	-	MPMX19_01963	0.59	+0.1
2,045,234	-	MPMX19_01963	0.59	+0.5
2,045,234	-	MPMX19_01963	0.59	-0.6
2,045,668	+			+0.7
2,045,668	+			-1.1
2,045,668	+			-1.1
2,045,668	+			-1.3
2,045,668	+			-0.2
2,045,668	+			+0.1
2,045,668	+			+0.0
2,045,668	+			+0.1
2,045,668	+			-0.3
2,045,668	+			-0.1
2,045,668	+			-0.9
2,045,668	+			+0.1
2,045,668	+			+1.7
2,045,668	+			-1.6
2,045,668	+			-2.1
2,045,668	+			+0.1
2,045,668	+			-1.0
2,045,669	-			-1.1
2,045,669	-			-0.3
2,045,669	-			+1.3
2,045,669	-			+0.1
2,045,669	-			-1.4
2,045,669	-			+0.6
2,045,669	-			+0.5
2,045,669	-			-0.9
2,045,669	-			-1.5
2,045,669	-			+1.1
2,045,669	-			-1.1
2,045,669	-			-0.5
2,045,669	-			+1.3
2,045,669	-			-0.7
2,045,850	+	MPMX19_01964	0.80	-1.3
2,045,865	+	MPMX19_01964	0.87	+0.5
2,045,865	+	MPMX19_01964	0.87	-0.7
2,045,865	+	MPMX19_01964	0.87	-1.2
2,045,866	-	MPMX19_01964	0.88	-1.3
2,045,866	-	MPMX19_01964	0.88	+0.1
2,045,866	-	MPMX19_01964	0.88	-0.4

Or see this region's nucleotide sequence