Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_01776 and MPMX19_01777 are separated by 329 nucleotides MPMX19_01777 and MPMX19_01778 are separated by 17 nucleotides
MPMX19_01776: MPMX19_01776 - Acetolactate synthase isozyme 3 large subunit, at 1,862,878 to 1,864,641
_01776
MPMX19_01777: MPMX19_01777 - 2-aminoadipate transaminase, at 1,864,971 to 1,866,182
_01777
MPMX19_01778: MPMX19_01778 - tRNA dimethylallyltransferase, at 1,866,200 to 1,867,216
_01778
Position (kb)
1864
1865
1866
1867 Strain fitness (log2 ratio)
-1
0
1
2
3 at 1864.722 kb on - strand at 1864.722 kb on - strand at 1864.722 kb on - strand at 1864.776 kb on - strand at 1864.776 kb on - strand at 1864.776 kb on - strand at 1864.776 kb on - strand at 1865.227 kb on + strand, within MPMX19_01777 at 1865.228 kb on - strand, within MPMX19_01777 at 1865.228 kb on - strand, within MPMX19_01777 at 1865.270 kb on - strand, within MPMX19_01777 at 1865.270 kb on - strand, within MPMX19_01777 at 1865.270 kb on - strand, within MPMX19_01777 at 1865.270 kb on - strand, within MPMX19_01777 at 1865.540 kb on - strand, within MPMX19_01777 at 1865.554 kb on + strand, within MPMX19_01777 at 1865.555 kb on - strand, within MPMX19_01777 at 1865.669 kb on - strand, within MPMX19_01777 at 1865.750 kb on - strand, within MPMX19_01777 at 1865.750 kb on - strand, within MPMX19_01777 at 1865.750 kb on - strand, within MPMX19_01777 at 1865.762 kb on - strand, within MPMX19_01777 at 1865.791 kb on + strand, within MPMX19_01777 at 1865.792 kb on - strand, within MPMX19_01777 at 1865.792 kb on - strand, within MPMX19_01777 at 1865.792 kb on - strand, within MPMX19_01777 at 1865.792 kb on - strand, within MPMX19_01777 at 1865.792 kb on - strand, within MPMX19_01777 at 1865.921 kb on + strand, within MPMX19_01777 at 1865.921 kb on + strand, within MPMX19_01777 at 1865.921 kb on + strand, within MPMX19_01777 at 1865.921 kb on + strand, within MPMX19_01777 at 1865.922 kb on - strand, within MPMX19_01777 at 1865.922 kb on - strand, within MPMX19_01777 at 1865.922 kb on - strand, within MPMX19_01777 at 1865.922 kb on - strand, within MPMX19_01777 at 1865.922 kb on - strand, within MPMX19_01777 at 1865.922 kb on - strand, within MPMX19_01777 at 1865.923 kb on + strand, within MPMX19_01777 at 1865.923 kb on + strand, within MPMX19_01777 at 1865.923 kb on + strand, within MPMX19_01777 at 1865.923 kb on + strand, within MPMX19_01777 at 1865.923 kb on + strand, within MPMX19_01777 at 1865.923 kb on + strand, within MPMX19_01777 at 1865.923 kb on + strand, within MPMX19_01777 at 1865.924 kb on - strand, within MPMX19_01777 at 1865.924 kb on - strand, within MPMX19_01777 at 1865.924 kb on - strand, within MPMX19_01777 at 1865.924 kb on - strand, within MPMX19_01777 at 1865.924 kb on - strand, within MPMX19_01777 at 1865.924 kb on - strand, within MPMX19_01777 at 1865.924 kb on - strand, within MPMX19_01777 at 1865.924 kb on - strand, within MPMX19_01777 at 1865.924 kb on - strand, within MPMX19_01777 at 1865.924 kb on - strand, within MPMX19_01777 at 1865.924 kb on - strand, within MPMX19_01777 at 1865.924 kb on - strand, within MPMX19_01777 at 1865.924 kb on - strand, within MPMX19_01777 at 1865.953 kb on + strand, within MPMX19_01777 at 1865.953 kb on + strand, within MPMX19_01777 at 1865.953 kb on + strand, within MPMX19_01777 at 1865.953 kb on + strand, within MPMX19_01777 at 1865.954 kb on - strand, within MPMX19_01777 at 1866.019 kb on + strand, within MPMX19_01777 at 1866.020 kb on - strand, within MPMX19_01777 at 1866.209 kb on + strand at 1866.210 kb on - strand at 1866.283 kb on + strand at 1866.295 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 1,864,722 - -1.1 1,864,722 - -0.5 1,864,722 - -0.6 1,864,776 - -0.5 1,864,776 - -0.6 1,864,776 - -0.7 1,864,776 - -1.7 1,865,227 + MPMX19_01777 0.21 +1.7 1,865,228 - MPMX19_01777 0.21 +1.7 1,865,228 - MPMX19_01777 0.21 -0.3 1,865,270 - MPMX19_01777 0.25 +0.7 1,865,270 - MPMX19_01777 0.25 +0.3 1,865,270 - MPMX19_01777 0.25 -0.9 1,865,270 - MPMX19_01777 0.25 -0.3 1,865,540 - MPMX19_01777 0.47 +0.1 1,865,554 + MPMX19_01777 0.48 -0.3 1,865,555 - MPMX19_01777 0.48 -0.9 1,865,669 - MPMX19_01777 0.58 +0.7 1,865,750 - MPMX19_01777 0.64 +1.7 1,865,750 - MPMX19_01777 0.64 +0.7 1,865,750 - MPMX19_01777 0.64 -1.5 1,865,762 - MPMX19_01777 0.65 -0.7 1,865,791 + MPMX19_01777 0.68 +1.7 1,865,792 - MPMX19_01777 0.68 +0.7 1,865,792 - MPMX19_01777 0.68 +2.3 1,865,792 - MPMX19_01777 0.68 +1.7 1,865,792 - MPMX19_01777 0.68 +0.7 1,865,792 - MPMX19_01777 0.68 +0.7 1,865,921 + MPMX19_01777 0.78 +0.7 1,865,921 + MPMX19_01777 0.78 +1.7 1,865,921 + MPMX19_01777 0.78 +1.7 1,865,921 + MPMX19_01777 0.78 +0.1 1,865,922 - MPMX19_01777 0.78 -0.3 1,865,922 - MPMX19_01777 0.78 +0.7 1,865,922 - MPMX19_01777 0.78 +0.7 1,865,922 - MPMX19_01777 0.78 +0.1 1,865,922 - MPMX19_01777 0.78 +1.7 1,865,922 - MPMX19_01777 0.78 +0.1 1,865,923 + MPMX19_01777 0.79 +0.7 1,865,923 + MPMX19_01777 0.79 +0.7 1,865,923 + MPMX19_01777 0.79 +0.3 1,865,923 + MPMX19_01777 0.79 +1.7 1,865,923 + MPMX19_01777 0.79 -0.7 1,865,923 + MPMX19_01777 0.79 +1.1 1,865,923 + MPMX19_01777 0.79 +1.7 1,865,924 - MPMX19_01777 0.79 -1.1 1,865,924 - MPMX19_01777 0.79 -0.9 1,865,924 - MPMX19_01777 0.79 +0.7 1,865,924 - MPMX19_01777 0.79 +0.7 1,865,924 - MPMX19_01777 0.79 -0.9 1,865,924 - MPMX19_01777 0.79 +0.7 1,865,924 - MPMX19_01777 0.79 +0.7 1,865,924 - MPMX19_01777 0.79 +1.7 1,865,924 - MPMX19_01777 0.79 +1.3 1,865,924 - MPMX19_01777 0.79 +1.7 1,865,924 - MPMX19_01777 0.79 -0.3 1,865,924 - MPMX19_01777 0.79 +0.7 1,865,924 - MPMX19_01777 0.79 +1.1 1,865,953 + MPMX19_01777 0.81 +3.3 1,865,953 + MPMX19_01777 0.81 +0.7 1,865,953 + MPMX19_01777 0.81 +1.7 1,865,953 + MPMX19_01777 0.81 -0.3 1,865,954 - MPMX19_01777 0.81 +0.1 1,866,019 + MPMX19_01777 0.86 +2.7 1,866,020 - MPMX19_01777 0.87 +0.1 1,866,209 + -1.1 1,866,210 - -1.2 1,866,283 + +0.3 1,866,295 + -0.8
Or see this region's nucleotide sequence