Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_01650 and MPMX19_01651 are separated by 128 nucleotides MPMX19_01651 and MPMX19_01652 are separated by 59 nucleotides MPMX19_01652 and MPMX19_01653 are separated by 346 nucleotides
MPMX19_01650: MPMX19_01650 - hypothetical protein, at 1,734,305 to 1,734,571
_01650
MPMX19_01651: MPMX19_01651 - hypothetical protein, at 1,734,700 to 1,735,155
_01651
MPMX19_01652: MPMX19_01652 - hypothetical protein, at 1,735,215 to 1,735,877
_01652
MPMX19_01653: MPMX19_01653 - Serine acetyltransferase, at 1,736,224 to 1,737,009
_01653
Position (kb)
1735
1736 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1734.533 kb on + strand, within MPMX19_01650 at 1734.533 kb on + strand, within MPMX19_01650 at 1734.533 kb on + strand, within MPMX19_01650 at 1734.533 kb on + strand, within MPMX19_01650 at 1734.533 kb on + strand, within MPMX19_01650 at 1734.533 kb on + strand, within MPMX19_01650 at 1734.533 kb on + strand, within MPMX19_01650 at 1734.533 kb on + strand, within MPMX19_01650 at 1734.533 kb on + strand, within MPMX19_01650 at 1734.533 kb on + strand, within MPMX19_01650 at 1734.533 kb on + strand, within MPMX19_01650 at 1734.533 kb on + strand, within MPMX19_01650 at 1734.533 kb on + strand, within MPMX19_01650 at 1734.533 kb on + strand, within MPMX19_01650 at 1734.533 kb on + strand, within MPMX19_01650 at 1734.533 kb on + strand, within MPMX19_01650 at 1734.533 kb on + strand, within MPMX19_01650 at 1734.533 kb on + strand, within MPMX19_01650 at 1734.533 kb on + strand, within MPMX19_01650 at 1734.533 kb on + strand, within MPMX19_01650 at 1734.533 kb on + strand, within MPMX19_01650 at 1734.533 kb on + strand, within MPMX19_01650 at 1734.533 kb on + strand, within MPMX19_01650 at 1734.533 kb on + strand, within MPMX19_01650 at 1734.533 kb on + strand, within MPMX19_01650 at 1734.533 kb on + strand, within MPMX19_01650 at 1734.533 kb on + strand, within MPMX19_01650 at 1734.533 kb on + strand, within MPMX19_01650 at 1734.533 kb on + strand, within MPMX19_01650 at 1734.533 kb on + strand, within MPMX19_01650 at 1734.534 kb on - strand, within MPMX19_01650 at 1734.534 kb on - strand, within MPMX19_01650 at 1734.534 kb on - strand, within MPMX19_01650 at 1734.534 kb on - strand, within MPMX19_01650 at 1734.534 kb on - strand, within MPMX19_01650 at 1734.534 kb on - strand, within MPMX19_01650 at 1734.534 kb on - strand, within MPMX19_01650 at 1734.534 kb on - strand, within MPMX19_01650 at 1734.534 kb on - strand, within MPMX19_01650 at 1734.534 kb on - strand, within MPMX19_01650 at 1734.534 kb on - strand, within MPMX19_01650 at 1734.534 kb on - strand, within MPMX19_01650 at 1734.534 kb on - strand, within MPMX19_01650 at 1734.534 kb on - strand, within MPMX19_01650 at 1734.534 kb on - strand, within MPMX19_01650 at 1734.534 kb on - strand, within MPMX19_01650 at 1734.534 kb on - strand, within MPMX19_01650 at 1734.625 kb on + strand at 1734.625 kb on + strand at 1734.649 kb on + strand at 1734.649 kb on + strand at 1734.649 kb on + strand at 1734.649 kb on + strand at 1734.649 kb on + strand at 1734.719 kb on + strand at 1734.719 kb on + strand at 1734.719 kb on + strand at 1734.719 kb on + strand at 1734.719 kb on + strand at 1734.719 kb on + strand at 1734.750 kb on + strand, within MPMX19_01651 at 1734.750 kb on + strand, within MPMX19_01651 at 1734.750 kb on + strand, within MPMX19_01651 at 1735.216 kb on + strand at 1735.216 kb on + strand at 1735.217 kb on - strand at 1735.217 kb on - strand at 1735.217 kb on - strand at 1735.217 kb on - strand at 1735.262 kb on - strand at 1735.594 kb on + strand, within MPMX19_01652 at 1735.594 kb on + strand, within MPMX19_01652 at 1735.594 kb on + strand, within MPMX19_01652 at 1735.594 kb on + strand, within MPMX19_01652 at 1735.595 kb on - strand, within MPMX19_01652 at 1735.595 kb on - strand, within MPMX19_01652 at 1735.595 kb on - strand, within MPMX19_01652 at 1735.595 kb on - strand, within MPMX19_01652 at 1735.595 kb on - strand, within MPMX19_01652 at 1735.654 kb on + strand, within MPMX19_01652 at 1735.655 kb on - strand, within MPMX19_01652 at 1735.655 kb on - strand, within MPMX19_01652 at 1735.655 kb on - strand, within MPMX19_01652 at 1735.655 kb on - strand, within MPMX19_01652 at 1735.655 kb on - strand, within MPMX19_01652 at 1735.719 kb on - strand, within MPMX19_01652 at 1735.828 kb on + strand at 1735.828 kb on + strand at 1735.829 kb on - strand at 1736.050 kb on + strand at 1736.050 kb on + strand at 1736.050 kb on + strand at 1736.052 kb on + strand at 1736.052 kb on + strand at 1736.052 kb on + strand at 1736.052 kb on + strand at 1736.052 kb on + strand at 1736.052 kb on + strand at 1736.126 kb on + strand at 1736.126 kb on + strand at 1736.126 kb on + strand at 1736.239 kb on + strand at 1736.239 kb on + strand at 1736.239 kb on + strand at 1736.241 kb on + strand at 1736.560 kb on + strand, within MPMX19_01653 at 1736.560 kb on + strand, within MPMX19_01653 at 1736.560 kb on + strand, within MPMX19_01653 at 1736.560 kb on + strand, within MPMX19_01653 at 1736.560 kb on + strand, within MPMX19_01653 at 1736.560 kb on + strand, within MPMX19_01653 at 1736.560 kb on + strand, within MPMX19_01653 at 1736.560 kb on + strand, within MPMX19_01653 at 1736.560 kb on + strand, within MPMX19_01653 at 1736.560 kb on + strand, within MPMX19_01653 at 1736.560 kb on + strand, within MPMX19_01653 at 1736.560 kb on + strand, within MPMX19_01653 at 1736.560 kb on + strand, within MPMX19_01653 at 1736.560 kb on + strand, within MPMX19_01653 at 1736.560 kb on + strand, within MPMX19_01653 at 1736.560 kb on + strand, within MPMX19_01653 at 1736.560 kb on + strand, within MPMX19_01653 at 1736.560 kb on + strand, within MPMX19_01653 at 1736.560 kb on + strand, within MPMX19_01653 at 1736.560 kb on + strand, within MPMX19_01653 at 1736.560 kb on + strand, within MPMX19_01653 at 1736.560 kb on + strand, within MPMX19_01653 at 1736.560 kb on + strand, within MPMX19_01653 at 1736.560 kb on + strand, within MPMX19_01653 at 1736.803 kb on + strand, within MPMX19_01653 at 1736.803 kb on + strand, within MPMX19_01653 at 1736.803 kb on + strand, within MPMX19_01653 at 1736.803 kb on + strand, within MPMX19_01653 at 1736.803 kb on + strand, within MPMX19_01653 at 1736.804 kb on - strand, within MPMX19_01653
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 1,734,533 + MPMX19_01650 0.85 -1.0 1,734,533 + MPMX19_01650 0.85 -0.9 1,734,533 + MPMX19_01650 0.85 -0.3 1,734,533 + MPMX19_01650 0.85 -0.9 1,734,533 + MPMX19_01650 0.85 +1.9 1,734,533 + MPMX19_01650 0.85 +0.1 1,734,533 + MPMX19_01650 0.85 -0.2 1,734,533 + MPMX19_01650 0.85 -1.2 1,734,533 + MPMX19_01650 0.85 -0.8 1,734,533 + MPMX19_01650 0.85 +0.1 1,734,533 + MPMX19_01650 0.85 +0.1 1,734,533 + MPMX19_01650 0.85 -0.9 1,734,533 + MPMX19_01650 0.85 +0.1 1,734,533 + MPMX19_01650 0.85 -2.3 1,734,533 + MPMX19_01650 0.85 -0.4 1,734,533 + MPMX19_01650 0.85 -0.5 1,734,533 + MPMX19_01650 0.85 -1.6 1,734,533 + MPMX19_01650 0.85 -0.8 1,734,533 + MPMX19_01650 0.85 +0.7 1,734,533 + MPMX19_01650 0.85 -1.1 1,734,533 + MPMX19_01650 0.85 +0.9 1,734,533 + MPMX19_01650 0.85 -0.2 1,734,533 + MPMX19_01650 0.85 +0.7 1,734,533 + MPMX19_01650 0.85 -0.3 1,734,533 + MPMX19_01650 0.85 +0.0 1,734,533 + MPMX19_01650 0.85 -0.2 1,734,533 + MPMX19_01650 0.85 +0.2 1,734,533 + MPMX19_01650 0.85 -0.6 1,734,533 + MPMX19_01650 0.85 -0.3 1,734,533 + MPMX19_01650 0.85 -0.7 1,734,534 - MPMX19_01650 0.86 +0.9 1,734,534 - MPMX19_01650 0.86 -0.5 1,734,534 - MPMX19_01650 0.86 -0.4 1,734,534 - MPMX19_01650 0.86 -0.2 1,734,534 - MPMX19_01650 0.86 +0.2 1,734,534 - MPMX19_01650 0.86 -0.6 1,734,534 - MPMX19_01650 0.86 -0.6 1,734,534 - MPMX19_01650 0.86 -1.0 1,734,534 - MPMX19_01650 0.86 -0.9 1,734,534 - MPMX19_01650 0.86 +0.1 1,734,534 - MPMX19_01650 0.86 -1.2 1,734,534 - MPMX19_01650 0.86 +0.1 1,734,534 - MPMX19_01650 0.86 -0.9 1,734,534 - MPMX19_01650 0.86 +0.4 1,734,534 - MPMX19_01650 0.86 +0.2 1,734,534 - MPMX19_01650 0.86 +0.2 1,734,534 - MPMX19_01650 0.86 -1.9 1,734,625 + -2.3 1,734,625 + -0.4 1,734,649 + -1.0 1,734,649 + +1.5 1,734,649 + -0.3 1,734,649 + -0.8 1,734,649 + -0.9 1,734,719 + -0.8 1,734,719 + -0.8 1,734,719 + -0.8 1,734,719 + -0.2 1,734,719 + -0.1 1,734,719 + -0.3 1,734,750 + MPMX19_01651 0.11 +0.3 1,734,750 + MPMX19_01651 0.11 -1.1 1,734,750 + MPMX19_01651 0.11 +0.1 1,735,216 + +0.3 1,735,216 + -0.6 1,735,217 - -0.3 1,735,217 - -0.1 1,735,217 - +0.0 1,735,217 - -0.2 1,735,262 - +0.1 1,735,594 + MPMX19_01652 0.57 +1.3 1,735,594 + MPMX19_01652 0.57 -0.3 1,735,594 + MPMX19_01652 0.57 +0.5 1,735,594 + MPMX19_01652 0.57 +1.7 1,735,595 - MPMX19_01652 0.57 +1.1 1,735,595 - MPMX19_01652 0.57 +0.1 1,735,595 - MPMX19_01652 0.57 +0.7 1,735,595 - MPMX19_01652 0.57 -1.8 1,735,595 - MPMX19_01652 0.57 -1.5 1,735,654 + MPMX19_01652 0.66 +0.5 1,735,655 - MPMX19_01652 0.66 -0.4 1,735,655 - MPMX19_01652 0.66 -0.4 1,735,655 - MPMX19_01652 0.66 -0.3 1,735,655 - MPMX19_01652 0.66 +0.4 1,735,655 - MPMX19_01652 0.66 +0.9 1,735,719 - MPMX19_01652 0.76 -0.1 1,735,828 + +0.1 1,735,828 + +0.4 1,735,829 - -2.0 1,736,050 + -1.3 1,736,050 + +0.1 1,736,050 + -2.0 1,736,052 + +0.7 1,736,052 + +0.4 1,736,052 + +0.8 1,736,052 + -0.3 1,736,052 + +1.4 1,736,052 + -0.1 1,736,126 + +0.7 1,736,126 + -0.1 1,736,126 + +0.5 1,736,239 + -1.1 1,736,239 + +1.3 1,736,239 + -0.4 1,736,241 + -1.8 1,736,560 + MPMX19_01653 0.43 -1.2 1,736,560 + MPMX19_01653 0.43 +0.9 1,736,560 + MPMX19_01653 0.43 -1.9 1,736,560 + MPMX19_01653 0.43 -0.8 1,736,560 + MPMX19_01653 0.43 -2.9 1,736,560 + MPMX19_01653 0.43 +0.4 1,736,560 + MPMX19_01653 0.43 -0.3 1,736,560 + MPMX19_01653 0.43 -0.3 1,736,560 + MPMX19_01653 0.43 +1.4 1,736,560 + MPMX19_01653 0.43 +0.3 1,736,560 + MPMX19_01653 0.43 -0.6 1,736,560 + MPMX19_01653 0.43 -0.6 1,736,560 + MPMX19_01653 0.43 +1.2 1,736,560 + MPMX19_01653 0.43 +0.4 1,736,560 + MPMX19_01653 0.43 +0.7 1,736,560 + MPMX19_01653 0.43 -0.3 1,736,560 + MPMX19_01653 0.43 -0.1 1,736,560 + MPMX19_01653 0.43 -0.3 1,736,560 + MPMX19_01653 0.43 +0.5 1,736,560 + MPMX19_01653 0.43 +0.1 1,736,560 + MPMX19_01653 0.43 -2.5 1,736,560 + MPMX19_01653 0.43 -0.5 1,736,560 + MPMX19_01653 0.43 +0.3 1,736,560 + MPMX19_01653 0.43 +0.7 1,736,803 + MPMX19_01653 0.74 -0.6 1,736,803 + MPMX19_01653 0.74 +0.1 1,736,803 + MPMX19_01653 0.74 -1.5 1,736,803 + MPMX19_01653 0.74 +0.7 1,736,803 + MPMX19_01653 0.74 -2.1 1,736,804 - MPMX19_01653 0.74 -0.3
Or see this region's nucleotide sequence