Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_01599 and MPMX19_01600 are separated by 47 nucleotides MPMX19_01600 and MPMX19_01601 are separated by 31 nucleotides
MPMX19_01599: MPMX19_01599 - GDP-mannose pyrophosphatase NudK, at 1,675,937 to 1,676,551
_01599
MPMX19_01600: MPMX19_01600 - hypothetical protein, at 1,676,599 to 1,677,492
_01600
MPMX19_01601: MPMX19_01601 - DNA repair protein RecN, at 1,677,524 to 1,679,200
_01601
Position (kb)
1676
1677
1678 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1675.632 kb on + strand at 1675.633 kb on - strand at 1675.633 kb on - strand at 1675.633 kb on - strand at 1675.672 kb on - strand at 1675.684 kb on + strand at 1675.684 kb on + strand at 1675.684 kb on + strand at 1675.684 kb on + strand at 1675.684 kb on + strand at 1675.684 kb on + strand at 1675.684 kb on + strand at 1675.684 kb on + strand at 1675.684 kb on + strand at 1675.685 kb on - strand at 1675.685 kb on - strand at 1675.685 kb on - strand at 1675.685 kb on - strand at 1675.685 kb on - strand at 1675.685 kb on - strand at 1675.685 kb on - strand at 1675.685 kb on - strand at 1675.698 kb on + strand at 1675.703 kb on + strand at 1675.704 kb on - strand at 1675.708 kb on + strand at 1675.708 kb on + strand at 1675.708 kb on + strand at 1675.708 kb on + strand at 1675.708 kb on + strand at 1675.708 kb on + strand at 1675.708 kb on + strand at 1675.708 kb on + strand at 1675.708 kb on + strand at 1675.709 kb on - strand at 1675.709 kb on - strand at 1675.709 kb on - strand at 1675.709 kb on - strand at 1675.709 kb on - strand at 1675.714 kb on - strand at 1675.740 kb on + strand at 1675.740 kb on + strand at 1675.740 kb on + strand at 1675.740 kb on + strand at 1675.740 kb on + strand at 1675.741 kb on - strand at 1675.741 kb on - strand at 1675.741 kb on - strand at 1675.741 kb on - strand at 1675.809 kb on + strand at 1675.810 kb on - strand at 1675.810 kb on - strand at 1676.024 kb on + strand, within MPMX19_01599 at 1676.024 kb on + strand, within MPMX19_01599 at 1676.024 kb on + strand, within MPMX19_01599 at 1676.024 kb on + strand, within MPMX19_01599 at 1676.024 kb on + strand, within MPMX19_01599 at 1676.024 kb on + strand, within MPMX19_01599 at 1676.024 kb on + strand, within MPMX19_01599 at 1676.024 kb on + strand, within MPMX19_01599 at 1676.024 kb on + strand, within MPMX19_01599 at 1676.024 kb on + strand, within MPMX19_01599 at 1676.024 kb on + strand, within MPMX19_01599 at 1676.025 kb on - strand, within MPMX19_01599 at 1676.025 kb on - strand, within MPMX19_01599 at 1676.025 kb on - strand, within MPMX19_01599 at 1676.025 kb on - strand, within MPMX19_01599 at 1676.025 kb on - strand, within MPMX19_01599 at 1676.025 kb on - strand, within MPMX19_01599 at 1676.082 kb on + strand, within MPMX19_01599 at 1676.082 kb on + strand, within MPMX19_01599 at 1676.083 kb on - strand, within MPMX19_01599 at 1676.083 kb on - strand, within MPMX19_01599 at 1676.096 kb on + strand, within MPMX19_01599 at 1676.096 kb on + strand, within MPMX19_01599 at 1676.096 kb on + strand, within MPMX19_01599 at 1676.096 kb on + strand, within MPMX19_01599 at 1676.096 kb on + strand, within MPMX19_01599 at 1676.096 kb on + strand, within MPMX19_01599 at 1676.096 kb on + strand, within MPMX19_01599 at 1676.096 kb on + strand, within MPMX19_01599 at 1676.096 kb on + strand, within MPMX19_01599 at 1676.096 kb on + strand, within MPMX19_01599 at 1676.096 kb on + strand, within MPMX19_01599 at 1676.096 kb on + strand, within MPMX19_01599 at 1676.096 kb on + strand, within MPMX19_01599 at 1676.096 kb on + strand, within MPMX19_01599 at 1676.096 kb on + strand, within MPMX19_01599 at 1676.097 kb on - strand, within MPMX19_01599 at 1676.097 kb on - strand, within MPMX19_01599 at 1676.097 kb on - strand, within MPMX19_01599 at 1676.097 kb on - strand, within MPMX19_01599 at 1676.097 kb on - strand, within MPMX19_01599 at 1676.097 kb on - strand, within MPMX19_01599 at 1676.097 kb on - strand, within MPMX19_01599 at 1676.097 kb on - strand, within MPMX19_01599 at 1676.097 kb on - strand, within MPMX19_01599 at 1676.097 kb on - strand, within MPMX19_01599 at 1676.129 kb on + strand, within MPMX19_01599 at 1676.129 kb on + strand, within MPMX19_01599 at 1676.129 kb on + strand, within MPMX19_01599 at 1676.130 kb on - strand, within MPMX19_01599 at 1676.130 kb on - strand, within MPMX19_01599 at 1676.130 kb on - strand, within MPMX19_01599 at 1676.130 kb on - strand, within MPMX19_01599 at 1676.130 kb on - strand, within MPMX19_01599 at 1676.183 kb on + strand, within MPMX19_01599 at 1676.183 kb on + strand, within MPMX19_01599 at 1676.183 kb on + strand, within MPMX19_01599 at 1676.183 kb on + strand, within MPMX19_01599 at 1676.183 kb on + strand, within MPMX19_01599 at 1676.184 kb on - strand, within MPMX19_01599 at 1676.184 kb on - strand, within MPMX19_01599 at 1676.184 kb on - strand, within MPMX19_01599 at 1676.184 kb on - strand, within MPMX19_01599 at 1676.184 kb on - strand, within MPMX19_01599 at 1676.184 kb on - strand, within MPMX19_01599 at 1676.519 kb on + strand at 1676.519 kb on + strand at 1676.519 kb on + strand at 1676.519 kb on + strand at 1676.519 kb on + strand at 1676.519 kb on + strand at 1676.519 kb on + strand at 1676.519 kb on + strand at 1676.519 kb on + strand at 1676.519 kb on + strand at 1676.520 kb on - strand at 1676.520 kb on - strand at 1676.520 kb on - strand at 1676.520 kb on - strand at 1676.520 kb on - strand at 1676.520 kb on - strand at 1676.520 kb on - strand at 1676.520 kb on - strand at 1676.520 kb on - strand at 1676.520 kb on - strand at 1676.520 kb on - strand at 1676.632 kb on - strand at 1677.103 kb on + strand, within MPMX19_01600 at 1677.103 kb on + strand, within MPMX19_01600 at 1677.103 kb on + strand, within MPMX19_01600 at 1677.104 kb on - strand, within MPMX19_01600 at 1677.104 kb on - strand, within MPMX19_01600 at 1677.104 kb on - strand, within MPMX19_01600 at 1677.104 kb on - strand, within MPMX19_01600 at 1677.104 kb on - strand, within MPMX19_01600 at 1677.104 kb on - strand, within MPMX19_01600 at 1677.104 kb on - strand, within MPMX19_01600 at 1677.320 kb on + strand, within MPMX19_01600 at 1677.320 kb on + strand, within MPMX19_01600 at 1677.320 kb on + strand, within MPMX19_01600 at 1677.320 kb on + strand, within MPMX19_01600 at 1677.321 kb on - strand, within MPMX19_01600 at 1677.321 kb on - strand, within MPMX19_01600 at 1677.321 kb on - strand, within MPMX19_01600 at 1677.321 kb on - strand, within MPMX19_01600 at 1677.490 kb on + strand at 1677.490 kb on + strand at 1677.490 kb on + strand at 1677.490 kb on + strand at 1677.490 kb on + strand at 1677.490 kb on + strand at 1677.490 kb on + strand at 1677.490 kb on + strand at 1677.490 kb on + strand at 1677.490 kb on + strand at 1677.490 kb on + strand at 1677.490 kb on + strand at 1677.490 kb on + strand at 1677.490 kb on + strand at 1677.490 kb on + strand at 1677.490 kb on + strand at 1677.490 kb on + strand at 1677.490 kb on + strand at 1677.490 kb on + strand at 1677.490 kb on + strand at 1677.490 kb on + strand at 1677.490 kb on + strand at 1677.490 kb on + strand at 1677.490 kb on + strand at 1677.490 kb on + strand at 1677.491 kb on - strand at 1677.491 kb on - strand at 1677.491 kb on - strand at 1677.491 kb on - strand at 1677.491 kb on - strand at 1677.491 kb on - strand at 1677.491 kb on - strand at 1677.491 kb on - strand at 1677.491 kb on - strand at 1677.491 kb on - strand at 1677.491 kb on - strand at 1677.491 kb on - strand at 1677.491 kb on - strand at 1677.491 kb on - strand at 1677.491 kb on - strand at 1677.491 kb on - strand at 1677.491 kb on - strand at 1677.491 kb on - strand at 1677.491 kb on - strand at 1677.491 kb on - strand at 1677.491 kb on - strand at 1677.491 kb on - strand at 1677.491 kb on - strand at 1677.491 kb on - strand at 1677.510 kb on + strand at 1677.510 kb on + strand at 1677.510 kb on + strand at 1677.510 kb on + strand at 1677.510 kb on + strand at 1677.510 kb on + strand at 1677.510 kb on + strand at 1677.510 kb on + strand at 1677.510 kb on + strand at 1677.510 kb on + strand at 1677.510 kb on + strand at 1677.510 kb on + strand at 1677.510 kb on + strand at 1677.510 kb on + strand at 1677.510 kb on + strand at 1677.510 kb on + strand at 1677.510 kb on + strand at 1677.511 kb on - strand at 1677.511 kb on - strand at 1677.511 kb on - strand at 1677.511 kb on - strand at 1677.511 kb on - strand at 1677.511 kb on - strand at 1677.511 kb on - strand at 1677.511 kb on - strand at 1677.511 kb on - strand at 1677.511 kb on - strand at 1677.511 kb on - strand at 1677.511 kb on - strand at 1677.511 kb on - strand at 1677.511 kb on - strand at 1677.511 kb on - strand at 1677.511 kb on - strand at 1677.511 kb on - strand at 1677.511 kb on - strand at 1677.511 kb on - strand at 1677.511 kb on - strand at 1677.511 kb on - strand at 1677.511 kb on - strand at 1677.511 kb on - strand at 1677.511 kb on - strand at 1678.012 kb on + strand, within MPMX19_01601 at 1678.012 kb on + strand, within MPMX19_01601 at 1678.012 kb on + strand, within MPMX19_01601 at 1678.013 kb on - strand, within MPMX19_01601 at 1678.013 kb on - strand, within MPMX19_01601 at 1678.013 kb on - strand, within MPMX19_01601 at 1678.120 kb on + strand, within MPMX19_01601
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 1,675,632 + -0.9 1,675,633 - -1.4 1,675,633 - +0.1 1,675,633 - +0.3 1,675,672 - -0.9 1,675,684 + +0.5 1,675,684 + -1.5 1,675,684 + -0.5 1,675,684 + +0.2 1,675,684 + +0.7 1,675,684 + +0.7 1,675,684 + -1.7 1,675,684 + -0.9 1,675,684 + -1.6 1,675,685 - +0.2 1,675,685 - -0.3 1,675,685 - -1.0 1,675,685 - -0.2 1,675,685 - +0.4 1,675,685 - +0.1 1,675,685 - -0.4 1,675,685 - -0.7 1,675,698 + -0.9 1,675,703 + +0.1 1,675,704 - -0.9 1,675,708 + -0.8 1,675,708 + -1.6 1,675,708 + -0.7 1,675,708 + -2.5 1,675,708 + -1.6 1,675,708 + -0.7 1,675,708 + +0.1 1,675,708 + -1.0 1,675,708 + -1.4 1,675,709 - -1.3 1,675,709 - -0.1 1,675,709 - +0.9 1,675,709 - -1.7 1,675,709 - +0.3 1,675,714 - -0.3 1,675,740 + -0.9 1,675,740 + -0.0 1,675,740 + -0.3 1,675,740 + -0.3 1,675,740 + -1.0 1,675,741 - +0.2 1,675,741 - -0.6 1,675,741 - -0.7 1,675,741 - +0.3 1,675,809 + +0.5 1,675,810 - +1.4 1,675,810 - +0.5 1,676,024 + MPMX19_01599 0.14 -1.0 1,676,024 + MPMX19_01599 0.14 -0.5 1,676,024 + MPMX19_01599 0.14 +0.9 1,676,024 + MPMX19_01599 0.14 +0.6 1,676,024 + MPMX19_01599 0.14 -0.8 1,676,024 + MPMX19_01599 0.14 +0.7 1,676,024 + MPMX19_01599 0.14 +0.4 1,676,024 + MPMX19_01599 0.14 -1.5 1,676,024 + MPMX19_01599 0.14 +0.9 1,676,024 + MPMX19_01599 0.14 +0.0 1,676,024 + MPMX19_01599 0.14 -0.1 1,676,025 - MPMX19_01599 0.14 -0.5 1,676,025 - MPMX19_01599 0.14 -0.2 1,676,025 - MPMX19_01599 0.14 -2.2 1,676,025 - MPMX19_01599 0.14 +0.5 1,676,025 - MPMX19_01599 0.14 -1.8 1,676,025 - MPMX19_01599 0.14 -2.1 1,676,082 + MPMX19_01599 0.24 -0.6 1,676,082 + MPMX19_01599 0.24 -0.9 1,676,083 - MPMX19_01599 0.24 -1.1 1,676,083 - MPMX19_01599 0.24 +1.1 1,676,096 + MPMX19_01599 0.26 -0.1 1,676,096 + MPMX19_01599 0.26 -0.8 1,676,096 + MPMX19_01599 0.26 -1.7 1,676,096 + MPMX19_01599 0.26 -0.3 1,676,096 + MPMX19_01599 0.26 +0.1 1,676,096 + MPMX19_01599 0.26 -0.7 1,676,096 + MPMX19_01599 0.26 -0.1 1,676,096 + MPMX19_01599 0.26 +1.8 1,676,096 + MPMX19_01599 0.26 +0.4 1,676,096 + MPMX19_01599 0.26 +0.4 1,676,096 + MPMX19_01599 0.26 +0.2 1,676,096 + MPMX19_01599 0.26 -2.3 1,676,096 + MPMX19_01599 0.26 +0.1 1,676,096 + MPMX19_01599 0.26 -1.3 1,676,096 + MPMX19_01599 0.26 -0.4 1,676,097 - MPMX19_01599 0.26 -0.1 1,676,097 - MPMX19_01599 0.26 -1.3 1,676,097 - MPMX19_01599 0.26 -0.9 1,676,097 - MPMX19_01599 0.26 -1.7 1,676,097 - MPMX19_01599 0.26 -1.5 1,676,097 - MPMX19_01599 0.26 -0.3 1,676,097 - MPMX19_01599 0.26 -0.4 1,676,097 - MPMX19_01599 0.26 -0.7 1,676,097 - MPMX19_01599 0.26 -0.1 1,676,097 - MPMX19_01599 0.26 -1.1 1,676,129 + MPMX19_01599 0.31 -0.6 1,676,129 + MPMX19_01599 0.31 +0.1 1,676,129 + MPMX19_01599 0.31 +0.9 1,676,130 - MPMX19_01599 0.31 -0.3 1,676,130 - MPMX19_01599 0.31 +0.3 1,676,130 - MPMX19_01599 0.31 +1.1 1,676,130 - MPMX19_01599 0.31 -0.3 1,676,130 - MPMX19_01599 0.31 +0.1 1,676,183 + MPMX19_01599 0.40 +0.2 1,676,183 + MPMX19_01599 0.40 -1.0 1,676,183 + MPMX19_01599 0.40 -0.9 1,676,183 + MPMX19_01599 0.40 -1.7 1,676,183 + MPMX19_01599 0.40 -1.7 1,676,184 - MPMX19_01599 0.40 +0.2 1,676,184 - MPMX19_01599 0.40 -1.2 1,676,184 - MPMX19_01599 0.40 +0.1 1,676,184 - MPMX19_01599 0.40 -0.7 1,676,184 - MPMX19_01599 0.40 -0.7 1,676,184 - MPMX19_01599 0.40 -0.9 1,676,519 + +0.2 1,676,519 + -0.3 1,676,519 + -0.5 1,676,519 + +0.1 1,676,519 + -0.1 1,676,519 + -0.7 1,676,519 + +0.3 1,676,519 + -2.7 1,676,519 + +0.4 1,676,519 + +0.1 1,676,520 - +0.2 1,676,520 - +0.5 1,676,520 - -0.2 1,676,520 - +0.1 1,676,520 - -0.1 1,676,520 - -1.7 1,676,520 - -0.9 1,676,520 - -0.1 1,676,520 - +0.1 1,676,520 - -1.2 1,676,520 - -0.7 1,676,632 - -1.9 1,677,103 + MPMX19_01600 0.56 +0.4 1,677,103 + MPMX19_01600 0.56 +0.7 1,677,103 + MPMX19_01600 0.56 -0.9 1,677,104 - MPMX19_01600 0.56 -1.1 1,677,104 - MPMX19_01600 0.56 -0.3 1,677,104 - MPMX19_01600 0.56 +0.1 1,677,104 - MPMX19_01600 0.56 -0.9 1,677,104 - MPMX19_01600 0.56 +0.1 1,677,104 - MPMX19_01600 0.56 +0.5 1,677,104 - MPMX19_01600 0.56 -1.3 1,677,320 + MPMX19_01600 0.81 +0.4 1,677,320 + MPMX19_01600 0.81 +0.4 1,677,320 + MPMX19_01600 0.81 +0.1 1,677,320 + MPMX19_01600 0.81 -1.1 1,677,321 - MPMX19_01600 0.81 -0.2 1,677,321 - MPMX19_01600 0.81 -0.1 1,677,321 - MPMX19_01600 0.81 -1.3 1,677,321 - MPMX19_01600 0.81 +0.7 1,677,490 + -0.4 1,677,490 + +1.7 1,677,490 + -1.1 1,677,490 + -0.9 1,677,490 + -1.5 1,677,490 + +0.6 1,677,490 + +0.4 1,677,490 + -1.0 1,677,490 + -0.4 1,677,490 + -0.2 1,677,490 + +0.7 1,677,490 + -0.5 1,677,490 + -0.7 1,677,490 + -1.5 1,677,490 + +0.1 1,677,490 + +0.4 1,677,490 + +0.4 1,677,490 + -1.9 1,677,490 + -0.1 1,677,490 + -0.3 1,677,490 + -0.4 1,677,490 + -0.9 1,677,490 + -0.2 1,677,490 + +0.7 1,677,490 + -0.6 1,677,491 - -0.6 1,677,491 - -1.4 1,677,491 - +1.2 1,677,491 - -1.1 1,677,491 - -1.7 1,677,491 - -1.1 1,677,491 - -0.2 1,677,491 - -1.9 1,677,491 - -0.8 1,677,491 - +0.2 1,677,491 - +0.2 1,677,491 - -0.8 1,677,491 - +1.1 1,677,491 - +0.1 1,677,491 - -1.0 1,677,491 - -0.7 1,677,491 - +0.7 1,677,491 - +0.9 1,677,491 - -0.8 1,677,491 - -0.2 1,677,491 - +0.8 1,677,491 - -0.4 1,677,491 - -1.1 1,677,491 - -0.6 1,677,510 + -0.2 1,677,510 + -1.7 1,677,510 + +0.5 1,677,510 + -1.3 1,677,510 + +0.3 1,677,510 + +0.4 1,677,510 + +0.3 1,677,510 + +0.1 1,677,510 + +0.3 1,677,510 + -1.0 1,677,510 + -0.8 1,677,510 + +0.9 1,677,510 + -0.3 1,677,510 + -0.3 1,677,510 + +0.1 1,677,510 + -0.3 1,677,510 + +0.3 1,677,511 - -0.0 1,677,511 - -0.8 1,677,511 - -0.9 1,677,511 - +0.0 1,677,511 - -0.8 1,677,511 - +0.3 1,677,511 - -1.1 1,677,511 - -0.2 1,677,511 - -0.1 1,677,511 - -0.8 1,677,511 - -1.9 1,677,511 - +0.2 1,677,511 - -0.7 1,677,511 - -1.5 1,677,511 - -0.2 1,677,511 - -1.4 1,677,511 - -0.9 1,677,511 - -0.3 1,677,511 - -1.5 1,677,511 - +0.7 1,677,511 - -0.9 1,677,511 - -0.4 1,677,511 - -0.8 1,677,511 - -0.5 1,678,012 + MPMX19_01601 0.29 -0.5 1,678,012 + MPMX19_01601 0.29 +0.1 1,678,012 + MPMX19_01601 0.29 -0.9 1,678,013 - MPMX19_01601 0.29 -2.0 1,678,013 - MPMX19_01601 0.29 +1.1 1,678,013 - MPMX19_01601 0.29 -1.4 1,678,120 + MPMX19_01601 0.36 -1.5
Or see this region's nucleotide sequence