Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_01581 and MPMX19_01582 are separated by 23 nucleotides MPMX19_01582 and MPMX19_01583 are separated by 106 nucleotides MPMX19_01583 and MPMX19_01584 are separated by 77 nucleotides
MPMX19_01581: MPMX19_01581 - ATP-dependent RNA helicase DbpA, at 1,653,197 to 1,655,623
_01581
MPMX19_01582: MPMX19_01582 - Protein FeSII, at 1,655,647 to 1,656,030
_01582
MPMX19_01583: MPMX19_01583 - hypothetical protein, at 1,656,137 to 1,656,892
_01583
MPMX19_01584: MPMX19_01584 - Deoxyribodipyrimidine photo-lyase, at 1,656,970 to 1,658,442
_01584
Position (kb)
1655
1656
1657 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1654.757 kb on + strand, within MPMX19_01581 at 1654.757 kb on + strand, within MPMX19_01581 at 1654.757 kb on + strand, within MPMX19_01581 at 1654.757 kb on + strand, within MPMX19_01581 at 1654.757 kb on + strand, within MPMX19_01581 at 1654.757 kb on + strand, within MPMX19_01581 at 1654.757 kb on + strand, within MPMX19_01581 at 1654.758 kb on - strand, within MPMX19_01581 at 1654.758 kb on - strand, within MPMX19_01581 at 1654.758 kb on - strand, within MPMX19_01581 at 1654.758 kb on - strand, within MPMX19_01581 at 1654.758 kb on - strand, within MPMX19_01581 at 1654.958 kb on + strand, within MPMX19_01581 at 1654.958 kb on + strand, within MPMX19_01581 at 1654.958 kb on + strand, within MPMX19_01581 at 1654.958 kb on + strand, within MPMX19_01581 at 1654.958 kb on + strand, within MPMX19_01581 at 1654.958 kb on + strand, within MPMX19_01581 at 1654.959 kb on - strand, within MPMX19_01581 at 1654.959 kb on - strand, within MPMX19_01581 at 1654.959 kb on - strand, within MPMX19_01581 at 1654.959 kb on - strand, within MPMX19_01581 at 1654.959 kb on - strand, within MPMX19_01581 at 1654.959 kb on - strand, within MPMX19_01581 at 1654.959 kb on - strand, within MPMX19_01581 at 1655.014 kb on + strand, within MPMX19_01581 at 1655.014 kb on + strand, within MPMX19_01581 at 1655.014 kb on + strand, within MPMX19_01581 at 1655.014 kb on + strand, within MPMX19_01581 at 1655.014 kb on + strand, within MPMX19_01581 at 1655.014 kb on + strand, within MPMX19_01581 at 1655.014 kb on + strand, within MPMX19_01581 at 1655.015 kb on - strand, within MPMX19_01581 at 1655.015 kb on - strand, within MPMX19_01581 at 1655.015 kb on - strand, within MPMX19_01581 at 1655.015 kb on - strand, within MPMX19_01581 at 1655.015 kb on - strand, within MPMX19_01581 at 1655.015 kb on - strand, within MPMX19_01581 at 1655.015 kb on - strand, within MPMX19_01581 at 1655.060 kb on + strand, within MPMX19_01581 at 1655.060 kb on + strand, within MPMX19_01581 at 1655.060 kb on + strand, within MPMX19_01581 at 1655.060 kb on + strand, within MPMX19_01581 at 1655.060 kb on + strand, within MPMX19_01581 at 1655.061 kb on - strand, within MPMX19_01581 at 1655.061 kb on - strand, within MPMX19_01581 at 1655.061 kb on - strand, within MPMX19_01581 at 1655.061 kb on - strand, within MPMX19_01581 at 1655.061 kb on - strand, within MPMX19_01581 at 1655.061 kb on - strand, within MPMX19_01581 at 1655.061 kb on - strand, within MPMX19_01581 at 1655.061 kb on - strand, within MPMX19_01581 at 1655.061 kb on - strand, within MPMX19_01581 at 1655.061 kb on - strand, within MPMX19_01581 at 1655.061 kb on - strand, within MPMX19_01581 at 1655.061 kb on - strand, within MPMX19_01581 at 1655.276 kb on + strand, within MPMX19_01581 at 1655.276 kb on + strand, within MPMX19_01581 at 1655.276 kb on + strand, within MPMX19_01581 at 1655.276 kb on + strand, within MPMX19_01581 at 1655.276 kb on + strand, within MPMX19_01581 at 1655.276 kb on + strand, within MPMX19_01581 at 1655.276 kb on + strand, within MPMX19_01581 at 1655.276 kb on + strand, within MPMX19_01581 at 1655.276 kb on + strand, within MPMX19_01581 at 1655.276 kb on + strand, within MPMX19_01581 at 1655.276 kb on + strand, within MPMX19_01581 at 1655.276 kb on + strand, within MPMX19_01581 at 1655.276 kb on + strand, within MPMX19_01581 at 1655.276 kb on + strand, within MPMX19_01581 at 1655.276 kb on + strand, within MPMX19_01581 at 1655.276 kb on + strand, within MPMX19_01581 at 1655.276 kb on + strand, within MPMX19_01581 at 1655.276 kb on + strand, within MPMX19_01581 at 1655.276 kb on + strand, within MPMX19_01581 at 1655.276 kb on + strand, within MPMX19_01581 at 1655.276 kb on + strand, within MPMX19_01581 at 1655.276 kb on + strand, within MPMX19_01581 at 1655.276 kb on + strand, within MPMX19_01581 at 1655.276 kb on + strand, within MPMX19_01581 at 1655.277 kb on - strand, within MPMX19_01581 at 1655.277 kb on - strand, within MPMX19_01581 at 1655.277 kb on - strand, within MPMX19_01581 at 1655.277 kb on - strand, within MPMX19_01581 at 1655.277 kb on - strand, within MPMX19_01581 at 1655.277 kb on - strand, within MPMX19_01581 at 1655.277 kb on - strand, within MPMX19_01581 at 1655.277 kb on - strand, within MPMX19_01581 at 1655.277 kb on - strand, within MPMX19_01581 at 1655.277 kb on - strand, within MPMX19_01581 at 1655.277 kb on - strand, within MPMX19_01581 at 1655.277 kb on - strand, within MPMX19_01581 at 1655.277 kb on - strand, within MPMX19_01581 at 1655.277 kb on - strand, within MPMX19_01581 at 1655.648 kb on + strand at 1655.648 kb on + strand at 1655.648 kb on + strand at 1655.649 kb on - strand at 1655.649 kb on - strand at 1655.649 kb on - strand at 1655.649 kb on - strand at 1655.649 kb on - strand at 1655.739 kb on - strand, within MPMX19_01582 at 1655.864 kb on + strand, within MPMX19_01582 at 1655.864 kb on + strand, within MPMX19_01582 at 1655.864 kb on + strand, within MPMX19_01582 at 1655.864 kb on + strand, within MPMX19_01582 at 1655.864 kb on + strand, within MPMX19_01582 at 1655.864 kb on + strand, within MPMX19_01582 at 1655.864 kb on + strand, within MPMX19_01582 at 1655.864 kb on + strand, within MPMX19_01582 at 1655.864 kb on + strand, within MPMX19_01582 at 1655.864 kb on + strand, within MPMX19_01582 at 1655.864 kb on + strand, within MPMX19_01582 at 1655.864 kb on + strand, within MPMX19_01582 at 1655.864 kb on + strand, within MPMX19_01582 at 1655.864 kb on + strand, within MPMX19_01582 at 1655.864 kb on + strand, within MPMX19_01582 at 1655.864 kb on + strand, within MPMX19_01582 at 1655.864 kb on + strand, within MPMX19_01582 at 1655.864 kb on + strand, within MPMX19_01582 at 1655.864 kb on + strand, within MPMX19_01582 at 1655.864 kb on + strand, within MPMX19_01582 at 1655.865 kb on - strand, within MPMX19_01582 at 1655.865 kb on - strand, within MPMX19_01582 at 1655.865 kb on - strand, within MPMX19_01582 at 1655.865 kb on - strand, within MPMX19_01582 at 1655.865 kb on - strand, within MPMX19_01582 at 1655.865 kb on - strand, within MPMX19_01582 at 1655.865 kb on - strand, within MPMX19_01582 at 1655.865 kb on - strand, within MPMX19_01582 at 1655.865 kb on - strand, within MPMX19_01582 at 1655.865 kb on - strand, within MPMX19_01582 at 1655.865 kb on - strand, within MPMX19_01582 at 1655.865 kb on - strand, within MPMX19_01582 at 1655.865 kb on - strand, within MPMX19_01582 at 1655.865 kb on - strand, within MPMX19_01582 at 1655.865 kb on - strand, within MPMX19_01582 at 1655.865 kb on - strand, within MPMX19_01582 at 1655.978 kb on + strand, within MPMX19_01582 at 1655.978 kb on + strand, within MPMX19_01582 at 1655.978 kb on + strand, within MPMX19_01582 at 1655.978 kb on + strand, within MPMX19_01582 at 1655.979 kb on - strand, within MPMX19_01582 at 1656.034 kb on + strand at 1656.034 kb on + strand at 1656.045 kb on + strand at 1656.045 kb on + strand at 1656.046 kb on - strand at 1656.046 kb on - strand at 1656.148 kb on + strand at 1656.148 kb on + strand at 1656.148 kb on + strand at 1656.149 kb on - strand at 1656.356 kb on + strand, within MPMX19_01583 at 1656.848 kb on + strand at 1656.849 kb on - strand at 1656.849 kb on - strand at 1656.930 kb on + strand at 1656.930 kb on + strand at 1656.930 kb on + strand at 1656.930 kb on + strand at 1656.930 kb on + strand at 1656.930 kb on + strand at 1656.930 kb on + strand at 1656.930 kb on + strand at 1656.930 kb on + strand at 1656.930 kb on + strand at 1656.930 kb on + strand at 1656.930 kb on + strand at 1656.930 kb on + strand at 1656.930 kb on + strand at 1656.930 kb on + strand at 1656.930 kb on + strand at 1656.931 kb on - strand at 1656.931 kb on - strand at 1656.931 kb on - strand at 1656.931 kb on - strand at 1656.931 kb on - strand at 1656.931 kb on - strand at 1656.931 kb on - strand at 1656.931 kb on - strand at 1656.931 kb on - strand at 1656.931 kb on - strand at 1656.931 kb on - strand at 1656.931 kb on - strand at 1656.931 kb on - strand at 1656.931 kb on - strand at 1656.931 kb on - strand at 1656.931 kb on - strand at 1656.931 kb on - strand at 1656.931 kb on - strand at 1656.931 kb on - strand at 1656.931 kb on - strand at 1656.931 kb on - strand at 1656.931 kb on - strand at 1656.931 kb on - strand at 1656.931 kb on - strand at 1656.931 kb on - strand at 1656.932 kb on + strand at 1656.932 kb on + strand at 1656.933 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 1,654,757 + MPMX19_01581 0.64 -1.6 1,654,757 + MPMX19_01581 0.64 -1.2 1,654,757 + MPMX19_01581 0.64 -1.4 1,654,757 + MPMX19_01581 0.64 -0.5 1,654,757 + MPMX19_01581 0.64 -0.5 1,654,757 + MPMX19_01581 0.64 -1.5 1,654,757 + MPMX19_01581 0.64 +0.4 1,654,758 - MPMX19_01581 0.64 -0.8 1,654,758 - MPMX19_01581 0.64 -0.1 1,654,758 - MPMX19_01581 0.64 -0.1 1,654,758 - MPMX19_01581 0.64 +0.5 1,654,758 - MPMX19_01581 0.64 -0.7 1,654,958 + MPMX19_01581 0.73 -1.8 1,654,958 + MPMX19_01581 0.73 -0.8 1,654,958 + MPMX19_01581 0.73 -2.1 1,654,958 + MPMX19_01581 0.73 -0.6 1,654,958 + MPMX19_01581 0.73 -1.6 1,654,958 + MPMX19_01581 0.73 -0.4 1,654,959 - MPMX19_01581 0.73 +0.1 1,654,959 - MPMX19_01581 0.73 +0.3 1,654,959 - MPMX19_01581 0.73 +1.3 1,654,959 - MPMX19_01581 0.73 -0.6 1,654,959 - MPMX19_01581 0.73 -0.3 1,654,959 - MPMX19_01581 0.73 -1.3 1,654,959 - MPMX19_01581 0.73 +0.2 1,655,014 + MPMX19_01581 0.75 +1.7 1,655,014 + MPMX19_01581 0.75 -0.1 1,655,014 + MPMX19_01581 0.75 -1.5 1,655,014 + MPMX19_01581 0.75 -0.3 1,655,014 + MPMX19_01581 0.75 +0.3 1,655,014 + MPMX19_01581 0.75 +0.5 1,655,014 + MPMX19_01581 0.75 -0.3 1,655,015 - MPMX19_01581 0.75 +0.6 1,655,015 - MPMX19_01581 0.75 +0.5 1,655,015 - MPMX19_01581 0.75 -1.3 1,655,015 - MPMX19_01581 0.75 -0.6 1,655,015 - MPMX19_01581 0.75 +0.4 1,655,015 - MPMX19_01581 0.75 -0.2 1,655,015 - MPMX19_01581 0.75 -1.6 1,655,060 + MPMX19_01581 0.77 +0.7 1,655,060 + MPMX19_01581 0.77 -2.7 1,655,060 + MPMX19_01581 0.77 -1.5 1,655,060 + MPMX19_01581 0.77 +0.3 1,655,060 + MPMX19_01581 0.77 -0.3 1,655,061 - MPMX19_01581 0.77 -0.7 1,655,061 - MPMX19_01581 0.77 +0.5 1,655,061 - MPMX19_01581 0.77 -0.6 1,655,061 - MPMX19_01581 0.77 +1.7 1,655,061 - MPMX19_01581 0.77 -0.8 1,655,061 - MPMX19_01581 0.77 +1.3 1,655,061 - MPMX19_01581 0.77 -0.0 1,655,061 - MPMX19_01581 0.77 +0.5 1,655,061 - MPMX19_01581 0.77 -0.9 1,655,061 - MPMX19_01581 0.77 -2.0 1,655,061 - MPMX19_01581 0.77 +0.7 1,655,061 - MPMX19_01581 0.77 +0.7 1,655,276 + MPMX19_01581 0.86 -0.1 1,655,276 + MPMX19_01581 0.86 -0.3 1,655,276 + MPMX19_01581 0.86 -1.4 1,655,276 + MPMX19_01581 0.86 -1.8 1,655,276 + MPMX19_01581 0.86 -1.1 1,655,276 + MPMX19_01581 0.86 -0.6 1,655,276 + MPMX19_01581 0.86 +0.2 1,655,276 + MPMX19_01581 0.86 -1.1 1,655,276 + MPMX19_01581 0.86 +0.8 1,655,276 + MPMX19_01581 0.86 -1.7 1,655,276 + MPMX19_01581 0.86 +0.5 1,655,276 + MPMX19_01581 0.86 +1.1 1,655,276 + MPMX19_01581 0.86 -0.6 1,655,276 + MPMX19_01581 0.86 -0.5 1,655,276 + MPMX19_01581 0.86 +0.7 1,655,276 + MPMX19_01581 0.86 -1.7 1,655,276 + MPMX19_01581 0.86 -0.5 1,655,276 + MPMX19_01581 0.86 +0.2 1,655,276 + MPMX19_01581 0.86 -0.5 1,655,276 + MPMX19_01581 0.86 +1.7 1,655,276 + MPMX19_01581 0.86 -0.0 1,655,276 + MPMX19_01581 0.86 -0.1 1,655,276 + MPMX19_01581 0.86 -1.0 1,655,276 + MPMX19_01581 0.86 +0.1 1,655,277 - MPMX19_01581 0.86 +0.1 1,655,277 - MPMX19_01581 0.86 -2.6 1,655,277 - MPMX19_01581 0.86 -0.5 1,655,277 - MPMX19_01581 0.86 -1.5 1,655,277 - MPMX19_01581 0.86 -1.8 1,655,277 - MPMX19_01581 0.86 -0.5 1,655,277 - MPMX19_01581 0.86 +0.2 1,655,277 - MPMX19_01581 0.86 +0.5 1,655,277 - MPMX19_01581 0.86 -0.6 1,655,277 - MPMX19_01581 0.86 +0.1 1,655,277 - MPMX19_01581 0.86 -0.1 1,655,277 - MPMX19_01581 0.86 +0.9 1,655,277 - MPMX19_01581 0.86 -1.1 1,655,277 - MPMX19_01581 0.86 +1.2 1,655,648 + -0.6 1,655,648 + +0.7 1,655,648 + -1.3 1,655,649 - -0.1 1,655,649 - -0.6 1,655,649 - -0.9 1,655,649 - -0.1 1,655,649 - +0.1 1,655,739 - MPMX19_01582 0.24 -1.2 1,655,864 + MPMX19_01582 0.57 -0.9 1,655,864 + MPMX19_01582 0.57 -0.7 1,655,864 + MPMX19_01582 0.57 +0.5 1,655,864 + MPMX19_01582 0.57 -2.1 1,655,864 + MPMX19_01582 0.57 -0.4 1,655,864 + MPMX19_01582 0.57 -0.3 1,655,864 + MPMX19_01582 0.57 -0.0 1,655,864 + MPMX19_01582 0.57 -0.0 1,655,864 + MPMX19_01582 0.57 -0.9 1,655,864 + MPMX19_01582 0.57 -0.1 1,655,864 + MPMX19_01582 0.57 +0.8 1,655,864 + MPMX19_01582 0.57 -0.1 1,655,864 + MPMX19_01582 0.57 +0.7 1,655,864 + MPMX19_01582 0.57 -0.7 1,655,864 + MPMX19_01582 0.57 +1.0 1,655,864 + MPMX19_01582 0.57 -0.9 1,655,864 + MPMX19_01582 0.57 +0.7 1,655,864 + MPMX19_01582 0.57 -0.1 1,655,864 + MPMX19_01582 0.57 +1.4 1,655,864 + MPMX19_01582 0.57 +0.3 1,655,865 - MPMX19_01582 0.57 +0.1 1,655,865 - MPMX19_01582 0.57 -1.6 1,655,865 - MPMX19_01582 0.57 -0.2 1,655,865 - MPMX19_01582 0.57 +0.1 1,655,865 - MPMX19_01582 0.57 -0.1 1,655,865 - MPMX19_01582 0.57 -0.5 1,655,865 - MPMX19_01582 0.57 -0.1 1,655,865 - MPMX19_01582 0.57 +0.9 1,655,865 - MPMX19_01582 0.57 -1.6 1,655,865 - MPMX19_01582 0.57 +0.2 1,655,865 - MPMX19_01582 0.57 -0.5 1,655,865 - MPMX19_01582 0.57 +0.7 1,655,865 - MPMX19_01582 0.57 +0.8 1,655,865 - MPMX19_01582 0.57 -0.7 1,655,865 - MPMX19_01582 0.57 -1.3 1,655,865 - MPMX19_01582 0.57 +0.7 1,655,978 + MPMX19_01582 0.86 -0.7 1,655,978 + MPMX19_01582 0.86 +0.3 1,655,978 + MPMX19_01582 0.86 -0.6 1,655,978 + MPMX19_01582 0.86 -0.6 1,655,979 - MPMX19_01582 0.86 -0.7 1,656,034 + +0.1 1,656,034 + -0.7 1,656,045 + +0.1 1,656,045 + -0.3 1,656,046 - -1.2 1,656,046 - -1.5 1,656,148 + -0.2 1,656,148 + +0.6 1,656,148 + +0.0 1,656,149 - -1.1 1,656,356 + MPMX19_01583 0.29 +0.7 1,656,848 + +0.0 1,656,849 - -1.1 1,656,849 - -0.1 1,656,930 + -0.5 1,656,930 + -0.4 1,656,930 + +0.5 1,656,930 + -0.3 1,656,930 + -0.6 1,656,930 + -1.5 1,656,930 + +0.1 1,656,930 + +0.5 1,656,930 + -0.5 1,656,930 + -1.3 1,656,930 + -0.0 1,656,930 + -0.1 1,656,930 + -0.6 1,656,930 + +0.5 1,656,930 + -0.8 1,656,930 + -0.1 1,656,931 - +0.7 1,656,931 - -1.9 1,656,931 - -1.2 1,656,931 - -1.5 1,656,931 - -0.2 1,656,931 - -0.3 1,656,931 - -2.3 1,656,931 - +0.5 1,656,931 - -1.3 1,656,931 - -0.2 1,656,931 - -0.8 1,656,931 - -1.3 1,656,931 - +2.3 1,656,931 - -0.2 1,656,931 - -1.0 1,656,931 - +0.7 1,656,931 - -1.2 1,656,931 - +0.2 1,656,931 - -0.6 1,656,931 - -1.8 1,656,931 - -0.3 1,656,931 - -2.6 1,656,931 - +1.0 1,656,931 - -1.1 1,656,931 - -0.4 1,656,932 + +0.7 1,656,932 + -2.6 1,656,933 - -1.3
Or see this region's nucleotide sequence