Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_00973 and MPMX19_00974 are separated by 6 nucleotides MPMX19_00974 and MPMX19_00975 are separated by 16 nucleotides MPMX19_00975 and MPMX19_00976 are separated by 257 nucleotides
MPMX19_00973: MPMX19_00973 - hypothetical protein, at 1,013,495 to 1,014,049
_00973
MPMX19_00974: MPMX19_00974 - Putative aminoacrylate hydrolase RutD, at 1,014,056 to 1,014,802
_00974
MPMX19_00975: MPMX19_00975 - hypothetical protein, at 1,014,819 to 1,015,364
_00975
MPMX19_00976: MPMX19_00976 - ATP-dependent RNA helicase RhlE, at 1,015,622 to 1,017,205
_00976
Position (kb)
1014
1015
1016 Strain fitness (log2 ratio)
-2
-1
0
1 at 1014.303 kb on + strand, within MPMX19_00974 at 1014.303 kb on + strand, within MPMX19_00974 at 1014.303 kb on + strand, within MPMX19_00974 at 1014.303 kb on + strand, within MPMX19_00974 at 1014.303 kb on + strand, within MPMX19_00974 at 1014.303 kb on + strand, within MPMX19_00974 at 1014.304 kb on - strand, within MPMX19_00974 at 1014.304 kb on - strand, within MPMX19_00974 at 1014.304 kb on - strand, within MPMX19_00974 at 1014.417 kb on + strand, within MPMX19_00974 at 1014.417 kb on + strand, within MPMX19_00974 at 1014.418 kb on - strand, within MPMX19_00974 at 1014.418 kb on - strand, within MPMX19_00974 at 1014.418 kb on - strand, within MPMX19_00974 at 1014.555 kb on + strand, within MPMX19_00974 at 1014.555 kb on + strand, within MPMX19_00974 at 1014.555 kb on + strand, within MPMX19_00974 at 1014.555 kb on + strand, within MPMX19_00974 at 1014.555 kb on + strand, within MPMX19_00974 at 1014.555 kb on + strand, within MPMX19_00974 at 1014.555 kb on + strand, within MPMX19_00974 at 1014.555 kb on + strand, within MPMX19_00974 at 1014.555 kb on + strand, within MPMX19_00974 at 1014.555 kb on + strand, within MPMX19_00974 at 1014.555 kb on + strand, within MPMX19_00974 at 1014.555 kb on + strand, within MPMX19_00974 at 1014.556 kb on - strand, within MPMX19_00974 at 1014.556 kb on - strand, within MPMX19_00974 at 1014.556 kb on - strand, within MPMX19_00974 at 1014.556 kb on - strand, within MPMX19_00974 at 1014.556 kb on - strand, within MPMX19_00974 at 1014.556 kb on - strand, within MPMX19_00974 at 1014.556 kb on - strand, within MPMX19_00974 at 1014.556 kb on - strand, within MPMX19_00974 at 1014.988 kb on + strand, within MPMX19_00975 at 1014.988 kb on + strand, within MPMX19_00975 at 1014.988 kb on + strand, within MPMX19_00975 at 1014.988 kb on + strand, within MPMX19_00975 at 1014.988 kb on + strand, within MPMX19_00975 at 1014.988 kb on + strand, within MPMX19_00975 at 1014.988 kb on + strand, within MPMX19_00975 at 1014.988 kb on + strand, within MPMX19_00975 at 1014.988 kb on + strand, within MPMX19_00975 at 1014.988 kb on + strand, within MPMX19_00975 at 1014.989 kb on - strand, within MPMX19_00975 at 1014.989 kb on - strand, within MPMX19_00975 at 1014.989 kb on - strand, within MPMX19_00975 at 1014.989 kb on - strand, within MPMX19_00975 at 1014.989 kb on - strand, within MPMX19_00975 at 1014.989 kb on - strand, within MPMX19_00975 at 1014.989 kb on - strand, within MPMX19_00975 at 1014.989 kb on - strand, within MPMX19_00975 at 1014.989 kb on - strand, within MPMX19_00975 at 1015.207 kb on + strand, within MPMX19_00975 at 1015.208 kb on - strand, within MPMX19_00975 at 1015.208 kb on - strand, within MPMX19_00975 at 1015.456 kb on + strand at 1015.457 kb on - strand at 1015.457 kb on - strand at 1015.457 kb on - strand at 1015.488 kb on + strand at 1015.526 kb on + strand at 1015.526 kb on + strand at 1015.526 kb on + strand at 1015.526 kb on + strand at 1015.526 kb on + strand at 1015.526 kb on + strand at 1015.526 kb on + strand at 1015.526 kb on + strand at 1015.526 kb on + strand at 1015.536 kb on + strand at 1015.536 kb on + strand at 1015.536 kb on + strand at 1015.536 kb on + strand at 1015.536 kb on + strand at 1015.536 kb on + strand at 1015.536 kb on + strand at 1015.536 kb on + strand at 1015.536 kb on + strand at 1015.536 kb on + strand at 1015.537 kb on - strand at 1015.682 kb on + strand at 1015.682 kb on + strand at 1015.682 kb on + strand at 1015.682 kb on + strand at 1015.683 kb on - strand at 1015.683 kb on - strand at 1015.904 kb on + strand, within MPMX19_00976 at 1015.905 kb on - strand, within MPMX19_00976 at 1015.913 kb on + strand, within MPMX19_00976 at 1015.914 kb on - strand, within MPMX19_00976 at 1015.914 kb on - strand, within MPMX19_00976 at 1015.914 kb on - strand, within MPMX19_00976
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 1,014,303 + MPMX19_00974 0.33 -0.4 1,014,303 + MPMX19_00974 0.33 -0.3 1,014,303 + MPMX19_00974 0.33 -0.4 1,014,303 + MPMX19_00974 0.33 -1.3 1,014,303 + MPMX19_00974 0.33 -0.4 1,014,303 + MPMX19_00974 0.33 +0.4 1,014,304 - MPMX19_00974 0.33 +0.2 1,014,304 - MPMX19_00974 0.33 -0.7 1,014,304 - MPMX19_00974 0.33 -0.4 1,014,417 + MPMX19_00974 0.48 +0.2 1,014,417 + MPMX19_00974 0.48 +0.6 1,014,418 - MPMX19_00974 0.48 -2.3 1,014,418 - MPMX19_00974 0.48 -1.1 1,014,418 - MPMX19_00974 0.48 +0.1 1,014,555 + MPMX19_00974 0.67 -1.1 1,014,555 + MPMX19_00974 0.67 +0.3 1,014,555 + MPMX19_00974 0.67 -0.7 1,014,555 + MPMX19_00974 0.67 -1.0 1,014,555 + MPMX19_00974 0.67 -0.8 1,014,555 + MPMX19_00974 0.67 -0.1 1,014,555 + MPMX19_00974 0.67 -0.9 1,014,555 + MPMX19_00974 0.67 -0.1 1,014,555 + MPMX19_00974 0.67 -0.7 1,014,555 + MPMX19_00974 0.67 -0.4 1,014,555 + MPMX19_00974 0.67 -1.0 1,014,555 + MPMX19_00974 0.67 -0.3 1,014,556 - MPMX19_00974 0.67 +0.1 1,014,556 - MPMX19_00974 0.67 +0.9 1,014,556 - MPMX19_00974 0.67 -0.2 1,014,556 - MPMX19_00974 0.67 -0.7 1,014,556 - MPMX19_00974 0.67 -0.0 1,014,556 - MPMX19_00974 0.67 -0.1 1,014,556 - MPMX19_00974 0.67 -0.3 1,014,556 - MPMX19_00974 0.67 -0.8 1,014,988 + MPMX19_00975 0.31 -2.0 1,014,988 + MPMX19_00975 0.31 -2.6 1,014,988 + MPMX19_00975 0.31 +0.7 1,014,988 + MPMX19_00975 0.31 -1.5 1,014,988 + MPMX19_00975 0.31 -1.7 1,014,988 + MPMX19_00975 0.31 +0.3 1,014,988 + MPMX19_00975 0.31 +1.4 1,014,988 + MPMX19_00975 0.31 -1.5 1,014,988 + MPMX19_00975 0.31 +0.3 1,014,988 + MPMX19_00975 0.31 +1.4 1,014,989 - MPMX19_00975 0.31 -0.8 1,014,989 - MPMX19_00975 0.31 +1.3 1,014,989 - MPMX19_00975 0.31 -0.2 1,014,989 - MPMX19_00975 0.31 +0.4 1,014,989 - MPMX19_00975 0.31 -1.1 1,014,989 - MPMX19_00975 0.31 -0.8 1,014,989 - MPMX19_00975 0.31 -0.0 1,014,989 - MPMX19_00975 0.31 -1.3 1,014,989 - MPMX19_00975 0.31 +0.7 1,015,207 + MPMX19_00975 0.71 -0.7 1,015,208 - MPMX19_00975 0.71 -0.2 1,015,208 - MPMX19_00975 0.71 +0.4 1,015,456 + +1.3 1,015,457 - +0.7 1,015,457 - -0.4 1,015,457 - +1.3 1,015,488 + -0.9 1,015,526 + -0.7 1,015,526 + +1.3 1,015,526 + +0.8 1,015,526 + +0.3 1,015,526 + -0.6 1,015,526 + -1.2 1,015,526 + -0.3 1,015,526 + -1.5 1,015,526 + -0.7 1,015,536 + +0.0 1,015,536 + -0.7 1,015,536 + -1.3 1,015,536 + +0.1 1,015,536 + -0.1 1,015,536 + -0.1 1,015,536 + -1.3 1,015,536 + +0.6 1,015,536 + -0.1 1,015,536 + -1.1 1,015,537 - -0.7 1,015,682 + -1.7 1,015,682 + -1.2 1,015,682 + +0.5 1,015,682 + -0.5 1,015,683 - -0.1 1,015,683 - -2.1 1,015,904 + MPMX19_00976 0.18 -1.2 1,015,905 - MPMX19_00976 0.18 -0.7 1,015,913 + MPMX19_00976 0.18 -0.1 1,015,914 - MPMX19_00976 0.18 -1.3 1,015,914 - MPMX19_00976 0.18 -1.9 1,015,914 - MPMX19_00976 0.18 +0.9
Or see this region's nucleotide sequence