Experiment: NF
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_00736 and MPMX19_00737 are separated by 26 nucleotides MPMX19_00737 and MPMX19_00738 are separated by 132 nucleotides MPMX19_00738 and MPMX19_00739 are separated by 168 nucleotides
MPMX19_00736: MPMX19_00736 - Riboflavin biosynthesis protein RibD, at 757,356 to 758,498
_00736
MPMX19_00737: MPMX19_00737 - Outer membrane protein assembly factor BamE, at 758,525 to 759,019
_00737
MPMX19_00738: MPMX19_00738 - hypothetical protein, at 759,152 to 759,745
_00738
MPMX19_00739: MPMX19_00739 - hypothetical protein, at 759,914 to 760,501
_00739
Position (kb) 758
759
760 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 759.032 kb on - strand at 759.032 kb on - strand at 759.032 kb on - strand at 759.032 kb on - strand at 759.032 kb on - strand at 759.032 kb on - strand at 759.032 kb on - strand at 759.032 kb on - strand at 759.166 kb on + strand at 759.166 kb on + strand at 759.167 kb on - strand at 759.167 kb on - strand at 759.299 kb on + strand, within MPMX19_00738 at 759.299 kb on + strand, within MPMX19_00738 at 759.299 kb on + strand, within MPMX19_00738 at 759.299 kb on + strand, within MPMX19_00738 at 759.299 kb on + strand, within MPMX19_00738 at 759.299 kb on + strand, within MPMX19_00738 at 759.299 kb on + strand, within MPMX19_00738 at 759.299 kb on + strand, within MPMX19_00738 at 759.299 kb on + strand, within MPMX19_00738 at 759.299 kb on + strand, within MPMX19_00738 at 759.299 kb on + strand, within MPMX19_00738 at 759.300 kb on - strand, within MPMX19_00738 at 759.300 kb on - strand, within MPMX19_00738 at 759.300 kb on - strand, within MPMX19_00738 at 759.300 kb on - strand, within MPMX19_00738 at 759.300 kb on - strand, within MPMX19_00738 at 759.300 kb on - strand, within MPMX19_00738 at 759.300 kb on - strand, within MPMX19_00738 at 759.425 kb on + strand, within MPMX19_00738 at 759.425 kb on + strand, within MPMX19_00738 at 759.425 kb on + strand, within MPMX19_00738 at 759.426 kb on - strand, within MPMX19_00738 at 759.426 kb on - strand, within MPMX19_00738 at 759.542 kb on + strand, within MPMX19_00738 at 759.542 kb on + strand, within MPMX19_00738 at 759.542 kb on + strand, within MPMX19_00738 at 759.542 kb on + strand, within MPMX19_00738 at 759.542 kb on + strand, within MPMX19_00738 at 759.542 kb on + strand, within MPMX19_00738 at 759.543 kb on - strand, within MPMX19_00738 at 759.543 kb on - strand, within MPMX19_00738 at 759.543 kb on - strand, within MPMX19_00738 at 759.543 kb on - strand, within MPMX19_00738 at 759.543 kb on - strand, within MPMX19_00738 at 759.605 kb on + strand, within MPMX19_00738 at 759.605 kb on + strand, within MPMX19_00738 at 759.605 kb on + strand, within MPMX19_00738 at 759.605 kb on + strand, within MPMX19_00738 at 759.605 kb on + strand, within MPMX19_00738 at 759.606 kb on - strand, within MPMX19_00738 at 759.606 kb on - strand, within MPMX19_00738 at 759.606 kb on - strand, within MPMX19_00738 at 759.606 kb on - strand, within MPMX19_00738 at 759.656 kb on + strand, within MPMX19_00738 at 759.656 kb on + strand, within MPMX19_00738 at 759.656 kb on + strand, within MPMX19_00738 at 759.656 kb on + strand, within MPMX19_00738 at 759.656 kb on + strand, within MPMX19_00738 at 759.656 kb on + strand, within MPMX19_00738 at 759.656 kb on + strand, within MPMX19_00738 at 759.656 kb on + strand, within MPMX19_00738 at 759.656 kb on + strand, within MPMX19_00738 at 759.656 kb on + strand, within MPMX19_00738 at 759.656 kb on + strand, within MPMX19_00738 at 759.657 kb on - strand, within MPMX19_00738 at 759.657 kb on - strand, within MPMX19_00738 at 759.657 kb on - strand, within MPMX19_00738 at 759.657 kb on - strand, within MPMX19_00738 at 759.657 kb on - strand, within MPMX19_00738 at 759.657 kb on - strand, within MPMX19_00738 at 759.657 kb on - strand, within MPMX19_00738 at 759.657 kb on - strand, within MPMX19_00738 at 759.657 kb on - strand, within MPMX19_00738 at 759.657 kb on - strand, within MPMX19_00738 at 759.755 kb on + strand at 759.755 kb on + strand at 759.755 kb on + strand at 759.755 kb on + strand at 759.755 kb on + strand at 759.755 kb on + strand at 759.755 kb on + strand at 759.755 kb on + strand at 759.755 kb on + strand at 759.755 kb on + strand at 759.755 kb on + strand at 759.755 kb on + strand at 759.755 kb on + strand at 759.755 kb on + strand at 759.755 kb on + strand at 759.755 kb on + strand at 759.755 kb on + strand at 759.755 kb on + strand at 759.755 kb on + strand at 759.755 kb on + strand at 759.755 kb on + strand at 759.756 kb on - strand at 759.756 kb on - strand at 759.756 kb on - strand at 759.756 kb on - strand at 759.756 kb on - strand at 759.756 kb on - strand at 759.756 kb on - strand at 759.756 kb on - strand at 759.756 kb on - strand at 759.756 kb on - strand at 759.756 kb on - strand at 759.756 kb on - strand at 759.756 kb on - strand at 759.756 kb on - strand at 759.756 kb on - strand at 759.756 kb on - strand at 759.756 kb on - strand at 759.756 kb on - strand at 759.756 kb on - strand at 759.756 kb on - strand at 759.756 kb on - strand at 759.756 kb on - strand at 759.756 kb on - strand at 759.756 kb on - strand at 759.756 kb on - strand at 759.756 kb on - strand at 759.756 kb on - strand at 759.757 kb on + strand at 759.757 kb on + strand at 759.757 kb on + strand at 759.757 kb on + strand at 759.757 kb on + strand at 759.757 kb on + strand at 759.757 kb on + strand at 759.757 kb on + strand at 759.757 kb on + strand at 759.757 kb on + strand at 759.757 kb on + strand at 759.757 kb on + strand at 759.757 kb on + strand at 759.757 kb on + strand at 759.757 kb on + strand at 759.757 kb on + strand at 759.757 kb on + strand at 759.757 kb on + strand at 759.757 kb on + strand at 759.757 kb on + strand at 759.757 kb on + strand at 759.757 kb on + strand at 759.757 kb on + strand at 759.757 kb on + strand at 759.757 kb on + strand at 759.757 kb on + strand at 759.757 kb on + strand at 759.757 kb on + strand at 759.757 kb on + strand at 759.757 kb on + strand at 759.757 kb on + strand at 759.757 kb on + strand at 759.757 kb on + strand at 759.758 kb on - strand at 759.758 kb on - strand at 759.758 kb on - strand at 759.758 kb on - strand at 759.758 kb on - strand at 759.758 kb on - strand at 759.758 kb on - strand at 759.758 kb on - strand at 759.758 kb on - strand at 759.758 kb on - strand at 759.758 kb on - strand at 759.758 kb on - strand at 759.758 kb on - strand at 759.758 kb on - strand at 759.758 kb on - strand at 759.758 kb on - strand at 759.758 kb on - strand at 759.758 kb on - strand at 759.758 kb on - strand at 759.758 kb on - strand at 759.758 kb on - strand at 759.758 kb on - strand at 759.758 kb on - strand at 759.758 kb on - strand at 759.758 kb on - strand at 759.758 kb on - strand at 759.758 kb on - strand at 759.759 kb on + strand at 759.759 kb on + strand at 759.759 kb on + strand at 759.759 kb on + strand at 759.759 kb on + strand at 759.759 kb on + strand at 759.759 kb on + strand at 759.759 kb on + strand at 759.759 kb on + strand at 759.759 kb on + strand at 759.759 kb on + strand at 759.759 kb on + strand at 759.759 kb on + strand at 759.759 kb on + strand at 759.759 kb on + strand at 759.759 kb on + strand at 759.759 kb on + strand at 759.759 kb on + strand at 759.759 kb on + strand at 759.759 kb on + strand at 759.759 kb on + strand at 759.759 kb on + strand at 759.759 kb on + strand at 759.759 kb on + strand at 759.759 kb on + strand at 759.759 kb on + strand at 759.759 kb on + strand at 759.759 kb on + strand at 759.759 kb on + strand at 759.759 kb on + strand at 759.759 kb on + strand at 759.759 kb on + strand at 759.759 kb on + strand at 759.759 kb on + strand at 759.759 kb on + strand at 759.759 kb on + strand at 759.759 kb on + strand at 759.759 kb on + strand at 759.759 kb on + strand at 759.759 kb on + strand at 759.759 kb on + strand at 759.759 kb on + strand at 759.759 kb on + strand at 759.759 kb on + strand at 759.759 kb on + strand at 759.759 kb on + strand at 759.759 kb on + strand at 759.759 kb on + strand at 759.759 kb on + strand at 759.759 kb on + strand at 759.759 kb on + strand at 759.759 kb on + strand at 759.759 kb on + strand at 759.760 kb on - strand at 759.760 kb on - strand at 759.760 kb on - strand at 759.760 kb on - strand at 759.760 kb on - strand at 759.760 kb on - strand at 759.760 kb on - strand at 759.760 kb on - strand at 759.760 kb on - strand at 759.760 kb on - strand at 759.760 kb on - strand at 759.760 kb on - strand at 759.760 kb on - strand at 759.760 kb on - strand at 759.760 kb on - strand at 759.760 kb on - strand at 759.760 kb on - strand at 759.760 kb on - strand at 759.760 kb on - strand at 759.760 kb on - strand at 759.760 kb on - strand at 759.760 kb on - strand at 759.760 kb on - strand at 759.760 kb on - strand at 759.760 kb on - strand at 759.760 kb on - strand at 759.760 kb on - strand at 759.760 kb on - strand at 759.760 kb on - strand at 759.760 kb on - strand at 759.760 kb on - strand at 759.760 kb on - strand at 759.760 kb on - strand at 759.760 kb on - strand at 759.760 kb on - strand at 759.760 kb on - strand at 759.760 kb on - strand at 759.760 kb on - strand at 759.760 kb on - strand at 759.760 kb on - strand at 759.779 kb on + strand at 759.780 kb on - strand at 759.780 kb on - strand at 759.780 kb on - strand at 759.780 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NF remove 759,032 - +0.3 759,032 - -0.7 759,032 - -0.3 759,032 - -0.6 759,032 - -1.1 759,032 - -1.3 759,032 - -1.0 759,032 - -0.5 759,166 + +0.2 759,166 + +0.4 759,167 - -0.1 759,167 - -1.2 759,299 + MPMX19_00738 0.25 -0.6 759,299 + MPMX19_00738 0.25 +0.8 759,299 + MPMX19_00738 0.25 -0.8 759,299 + MPMX19_00738 0.25 -0.5 759,299 + MPMX19_00738 0.25 -3.7 759,299 + MPMX19_00738 0.25 -0.5 759,299 + MPMX19_00738 0.25 +2.3 759,299 + MPMX19_00738 0.25 -2.8 759,299 + MPMX19_00738 0.25 +0.5 759,299 + MPMX19_00738 0.25 +0.7 759,299 + MPMX19_00738 0.25 -0.8 759,300 - MPMX19_00738 0.25 -0.0 759,300 - MPMX19_00738 0.25 +1.6 759,300 - MPMX19_00738 0.25 -1.2 759,300 - MPMX19_00738 0.25 -0.6 759,300 - MPMX19_00738 0.25 -0.3 759,300 - MPMX19_00738 0.25 +0.8 759,300 - MPMX19_00738 0.25 -1.3 759,425 + MPMX19_00738 0.46 -0.2 759,425 + MPMX19_00738 0.46 -1.4 759,425 + MPMX19_00738 0.46 -0.9 759,426 - MPMX19_00738 0.46 -0.0 759,426 - MPMX19_00738 0.46 -1.4 759,542 + MPMX19_00738 0.66 -0.1 759,542 + MPMX19_00738 0.66 -1.0 759,542 + MPMX19_00738 0.66 -3.3 759,542 + MPMX19_00738 0.66 +0.5 759,542 + MPMX19_00738 0.66 -0.7 759,542 + MPMX19_00738 0.66 -0.2 759,543 - MPMX19_00738 0.66 -1.3 759,543 - MPMX19_00738 0.66 -0.6 759,543 - MPMX19_00738 0.66 +0.4 759,543 - MPMX19_00738 0.66 -0.2 759,543 - MPMX19_00738 0.66 -0.9 759,605 + MPMX19_00738 0.76 -2.1 759,605 + MPMX19_00738 0.76 -0.4 759,605 + MPMX19_00738 0.76 -1.0 759,605 + MPMX19_00738 0.76 +0.8 759,605 + MPMX19_00738 0.76 -0.9 759,606 - MPMX19_00738 0.76 -0.1 759,606 - MPMX19_00738 0.76 -1.1 759,606 - MPMX19_00738 0.76 -0.6 759,606 - MPMX19_00738 0.76 +1.3 759,656 + MPMX19_00738 0.85 -0.7 759,656 + MPMX19_00738 0.85 -0.0 759,656 + MPMX19_00738 0.85 -0.6 759,656 + MPMX19_00738 0.85 -0.3 759,656 + MPMX19_00738 0.85 -0.1 759,656 + MPMX19_00738 0.85 -0.6 759,656 + MPMX19_00738 0.85 +0.5 759,656 + MPMX19_00738 0.85 -0.6 759,656 + MPMX19_00738 0.85 -0.6 759,656 + MPMX19_00738 0.85 +0.5 759,656 + MPMX19_00738 0.85 -0.9 759,657 - MPMX19_00738 0.85 -0.3 759,657 - MPMX19_00738 0.85 -0.5 759,657 - MPMX19_00738 0.85 +0.0 759,657 - MPMX19_00738 0.85 +0.5 759,657 - MPMX19_00738 0.85 -0.2 759,657 - MPMX19_00738 0.85 -0.9 759,657 - MPMX19_00738 0.85 -1.2 759,657 - MPMX19_00738 0.85 -1.6 759,657 - MPMX19_00738 0.85 +0.2 759,657 - MPMX19_00738 0.85 -2.6 759,755 + -1.6 759,755 + +0.2 759,755 + -1.4 759,755 + -1.3 759,755 + -3.0 759,755 + -1.7 759,755 + -1.5 759,755 + +1.1 759,755 + -1.3 759,755 + +0.1 759,755 + +0.3 759,755 + -0.2 759,755 + +0.6 759,755 + -0.2 759,755 + -0.3 759,755 + +0.8 759,755 + -0.1 759,755 + -0.8 759,755 + -0.5 759,755 + -1.1 759,755 + -1.5 759,756 - +0.4 759,756 - -0.5 759,756 - -0.9 759,756 - +0.9 759,756 - +1.0 759,756 - +0.1 759,756 - -0.3 759,756 - -1.0 759,756 - +0.9 759,756 - +0.9 759,756 - +0.5 759,756 - -0.8 759,756 - +0.2 759,756 - +0.1 759,756 - +0.1 759,756 - +0.1 759,756 - +0.1 759,756 - +0.9 759,756 - -0.1 759,756 - -0.4 759,756 - -0.9 759,756 - -0.1 759,756 - +0.5 759,756 - +1.7 759,756 - -2.4 759,756 - -0.0 759,756 - -1.2 759,757 + -0.1 759,757 + -2.2 759,757 + +0.1 759,757 + -2.5 759,757 + -0.6 759,757 + +0.0 759,757 + -0.3 759,757 + -0.6 759,757 + +0.5 759,757 + +0.5 759,757 + +0.2 759,757 + -1.9 759,757 + -0.1 759,757 + -0.1 759,757 + -0.4 759,757 + -0.1 759,757 + -0.2 759,757 + +0.6 759,757 + -0.4 759,757 + -1.8 759,757 + -0.6 759,757 + -0.8 759,757 + -0.6 759,757 + +1.1 759,757 + -0.9 759,757 + -0.8 759,757 + -1.1 759,757 + -0.5 759,757 + -0.9 759,757 + +0.0 759,757 + -0.9 759,757 + -0.3 759,757 + -0.9 759,758 - -1.9 759,758 - -0.9 759,758 - -0.5 759,758 - -0.5 759,758 - -0.2 759,758 - +0.7 759,758 - -2.3 759,758 - -0.9 759,758 - -0.6 759,758 - +0.2 759,758 - -2.0 759,758 - +0.4 759,758 - -0.4 759,758 - -0.6 759,758 - +0.2 759,758 - +0.5 759,758 - -0.0 759,758 - -1.1 759,758 - -2.1 759,758 - +0.4 759,758 - +1.3 759,758 - +1.4 759,758 - -0.3 759,758 - -1.0 759,758 - -0.5 759,758 - -0.1 759,758 - -1.1 759,759 + -1.3 759,759 + -0.5 759,759 + -1.3 759,759 + -0.3 759,759 + -0.9 759,759 + -1.7 759,759 + -1.3 759,759 + -1.5 759,759 + -1.5 759,759 + -0.6 759,759 + +1.0 759,759 + -0.5 759,759 + +0.7 759,759 + +0.1 759,759 + +0.3 759,759 + +0.1 759,759 + -0.5 759,759 + +0.3 759,759 + -0.3 759,759 + +1.7 759,759 + -0.3 759,759 + -1.5 759,759 + -0.5 759,759 + -1.0 759,759 + -0.7 759,759 + -0.1 759,759 + +0.5 759,759 + +0.8 759,759 + -0.8 759,759 + -0.2 759,759 + -0.7 759,759 + +0.2 759,759 + -0.6 759,759 + +0.2 759,759 + -0.5 759,759 + -0.2 759,759 + -0.5 759,759 + -1.4 759,759 + -0.3 759,759 + +0.3 759,759 + -0.9 759,759 + -0.1 759,759 + -0.1 759,759 + -0.8 759,759 + -0.6 759,759 + +0.0 759,759 + -2.2 759,759 + -0.4 759,759 + -0.9 759,759 + -0.8 759,759 + -0.3 759,759 + +0.6 759,759 + -1.8 759,760 - -0.1 759,760 - -2.0 759,760 - -1.6 759,760 - +1.3 759,760 - +0.5 759,760 - -0.6 759,760 - +2.1 759,760 - +1.0 759,760 - -1.6 759,760 - +0.7 759,760 - +0.3 759,760 - -0.1 759,760 - -0.3 759,760 - +0.2 759,760 - -0.2 759,760 - -0.8 759,760 - -0.3 759,760 - -0.1 759,760 - -0.1 759,760 - -1.7 759,760 - +1.4 759,760 - +0.1 759,760 - +1.3 759,760 - -1.0 759,760 - +0.7 759,760 - -0.3 759,760 - -0.1 759,760 - -1.8 759,760 - +0.1 759,760 - -0.2 759,760 - -1.4 759,760 - +0.1 759,760 - +0.1 759,760 - -0.7 759,760 - -1.1 759,760 - -0.8 759,760 - -1.6 759,760 - -0.1 759,760 - +0.6 759,760 - -0.9 759,779 + -0.3 759,780 - -0.3 759,780 - +0.9 759,780 - -1.3 759,780 - +0.4
Or see this region's nucleotide sequence